BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3554.p         (321 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773632.1| transmembrane protein [Herbaspirillum serope...   290   2e-76
ref|YP_004751310.1| hypothetical protein CFU_0652 [Collimonas fu...   287   2e-75
ref|YP_001101080.1| hypothetical protein HEAR2845 [Herminiimonas...   286   4e-75
ref|YP_001354790.1| hypothetical protein mma_3100 [Janthinobacte...   278   1e-72
ref|ZP_08274327.1| Transporter [Oxalobacteraceae bacterium IMCC9...   272   6e-71

>ref|YP_003773632.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ61724.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
          Length = 211

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 156/171 (91%), Positives = 163/171 (95%)

Query: 66  MRKYFITGLLILVPLAITLWVLNLIISTMDQSLLLLPEAWRPEALVGFHIPGLGTILTLL 125
           MRKYFITGLLILVPLAITLWVLNLIISTMDQSLLLLPE WRP   +G +IPGLG ILTLL
Sbjct: 1   MRKYFITGLLILVPLAITLWVLNLIISTMDQSLLLLPETWRPAHWLGHNIPGLGAILTLL 60

Query: 126 IVFLTGLAARNFIGRRLVLLWEGLLTRIPVVKSIYSSVKQVSDTLFSPSGNAFRKAVLIQ 185
           IVFLTGLAARNFIGRRLVLLWEGLLTRIPVVKSIYSSVKQVSDTLFSPSGNAFRKAVLIQ
Sbjct: 61  IVFLTGLAARNFIGRRLVLLWEGLLTRIPVVKSIYSSVKQVSDTLFSPSGNAFRKAVLIQ 120

Query: 186 YPRQGSWTIAFLTGIPGGEVKNHLAGDYVSLYVPTTPNPTSGFFLMVPRAD 236
           YPRQGSWTIAFLTG PGGEVKNHL G+++S+YVPTTPNPTSGFFLM+PRAD
Sbjct: 121 YPRQGSWTIAFLTGAPGGEVKNHLPGEFISVYVPTTPNPTSGFFLMLPRAD 171


>ref|YP_004751310.1| hypothetical protein CFU_0652 [Collimonas fungivorans Ter331]
 gb|AEK60487.1| conserved hypothetical protein [Collimonas fungivorans Ter331]
          Length = 211

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 145/171 (84%), Positives = 163/171 (95%)

Query: 66  MRKYFITGLLILVPLAITLWVLNLIISTMDQSLLLLPEAWRPEALVGFHIPGLGTILTLL 125
           MRKYFITGLL+LVPLAITLWVLNL+I TMDQSLLLLPE WRP+AL+G  IPGLGTILTLL
Sbjct: 1   MRKYFITGLLVLVPLAITLWVLNLVIGTMDQSLLLLPEQWRPKALLGHDIPGLGTILTLL 60

Query: 126 IVFLTGLAARNFIGRRLVLLWEGLLTRIPVVKSIYSSVKQVSDTLFSPSGNAFRKAVLIQ 185
           ++FLTGLA RNFIGR++V +WEG+LTRIPVV SIYSSVKQVSDTLFS SGNAFRKA+L+Q
Sbjct: 61  VIFLTGLATRNFIGRQIVSVWEGVLTRIPVVSSIYSSVKQVSDTLFSSSGNAFRKALLVQ 120

Query: 186 YPRQGSWTIAFLTGIPGGEVKNHLAGDYVSLYVPTTPNPTSGFFLMVPRAD 236
           YPR+GSWTIAFLTG+PGG+VKNHL+GDYVS+YVPTTPNPTSGFFLM+PRAD
Sbjct: 121 YPREGSWTIAFLTGVPGGDVKNHLSGDYVSVYVPTTPNPTSGFFLMLPRAD 171


>ref|YP_001101080.1| hypothetical protein HEAR2845 [Herminiimonas arsenicoxydans]
 emb|CAL62959.1| Conserved hypothetical protein; putative membrane protein
           [Herminiimonas arsenicoxydans]
          Length = 214

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 143/171 (83%), Positives = 159/171 (92%)

Query: 66  MRKYFITGLLILVPLAITLWVLNLIISTMDQSLLLLPEAWRPEALVGFHIPGLGTILTLL 125
           MRKYF+TGLLILVPLAITLWVLNLI+ TMDQSLLLLP +WRPEA++GF IPGLGTILTLL
Sbjct: 1   MRKYFVTGLLILVPLAITLWVLNLIVGTMDQSLLLLPASWRPEAVIGFAIPGLGTILTLL 60

Query: 126 IVFLTGLAARNFIGRRLVLLWEGLLTRIPVVKSIYSSVKQVSDTLFSPSGNAFRKAVLIQ 185
           I+FLTGLA RNFIG R+V LWE  L RIP+  +IYSSVKQVSDTLFS SGNAFRKA+L+Q
Sbjct: 61  IIFLTGLATRNFIGNRVVALWESALKRIPIFNTIYSSVKQVSDTLFSSSGNAFRKALLVQ 120

Query: 186 YPRQGSWTIAFLTGIPGGEVKNHLAGDYVSLYVPTTPNPTSGFFLMVPRAD 236
           YPRQGSWTIAFLTG+PGG+V+NHL+GDYVS+YVPTTPNPTSGFFLMVPRAD
Sbjct: 121 YPRQGSWTIAFLTGVPGGDVRNHLSGDYVSVYVPTTPNPTSGFFLMVPRAD 171


>ref|YP_001354790.1| hypothetical protein mma_3100 [Janthinobacterium sp. Marseille]
 gb|ABR89756.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 215

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 140/171 (81%), Positives = 157/171 (91%)

Query: 66  MRKYFITGLLILVPLAITLWVLNLIISTMDQSLLLLPEAWRPEALVGFHIPGLGTILTLL 125
           MRKYF+TGLLILVPLAITLWVLNLI+ TMDQSLLLLP  WRPEA+ GF IPGLGTILTLL
Sbjct: 1   MRKYFVTGLLILVPLAITLWVLNLIVGTMDQSLLLLPARWRPEAVFGFAIPGLGTILTLL 60

Query: 126 IVFLTGLAARNFIGRRLVLLWEGLLTRIPVVKSIYSSVKQVSDTLFSPSGNAFRKAVLIQ 185
           I+FLTGLA RNFIG R+V LWE +L RIPV  +IYSSVKQVSDTLFS SGNAFRKA+LI+
Sbjct: 61  IIFLTGLATRNFIGNRVVALWESILRRIPVFNTIYSSVKQVSDTLFSSSGNAFRKALLIE 120

Query: 186 YPRQGSWTIAFLTGIPGGEVKNHLAGDYVSLYVPTTPNPTSGFFLMVPRAD 236
           YPR+G+WTIAF+TG+PGG+V+NHL GDYVS+YVPTTPNPTSGFFLMVPRA+
Sbjct: 121 YPRKGAWTIAFMTGVPGGDVRNHLVGDYVSVYVPTTPNPTSGFFLMVPRAE 171


>ref|ZP_08274327.1| Transporter [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF32188.1| Transporter [Oxalobacteraceae bacterium IMCC9480]
          Length = 211

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 137/169 (81%), Positives = 154/169 (91%)

Query: 66  MRKYFITGLLILVPLAITLWVLNLIISTMDQSLLLLPEAWRPEALVGFHIPGLGTILTLL 125
           +RKYF+TGLLILVPLAITLWV+NLII TMDQSLLLLP  WRPE L GF IPGLGTILTLL
Sbjct: 2   LRKYFVTGLLILVPLAITLWVVNLIIGTMDQSLLLLPARWRPEVLFGFAIPGLGTILTLL 61

Query: 126 IVFLTGLAARNFIGRRLVLLWEGLLTRIPVVKSIYSSVKQVSDTLFSPSGNAFRKAVLIQ 185
           I+F+TGLA RNF+G  +V+ WE LLTRIPVV SIYSSVKQVSDTL S SGNAFRKAVL++
Sbjct: 62  IIFVTGLATRNFVGNHVVIWWERLLTRIPVVNSIYSSVKQVSDTLLSSSGNAFRKAVLVE 121

Query: 186 YPRQGSWTIAFLTGIPGGEVKNHLAGDYVSLYVPTTPNPTSGFFLMVPR 234
           YPR+GSWTIAFLTG+PGG+V+NHL GD++S+YVPTTPNPTSGFFLMVPR
Sbjct: 122 YPRRGSWTIAFLTGVPGGDVRNHLVGDFISIYVPTTPNPTSGFFLMVPR 170