BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3540.p         (124 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773685.1| heat shock protein 15 [Herbaspirillum serope...   188   2e-46
ref|XP_002535387.1| Cardiolipin synthetase, putative [Ricinus co...   147   5e-34
ref|YP_004751190.1| ribosome-associated heat shock protein impli...   141   3e-32
ref|YP_001101074.1| putative the heat shock protein Hsd15 [Hermi...   132   2e-29
ref|YP_001354782.1| heat shock protein 15 [Janthinobacterium sp....   130   6e-29

>ref|YP_003773685.1| heat shock protein 15 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61777.1| heat shock protein 15 [Herbaspirillum seropedicae SmR1]
          Length = 124

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 117/124 (94%), Positives = 121/124 (97%)

Query: 1   MDTTRIDKWCWAARFFKTRSQATEAVERGRIKLNGERTKPAHNVRNGDRLDIDNGSTEWE 60
           MDTTRIDKWCWAARFFKTRSQATEAVERGRI+LNGERTKPAHNV+ GDRLD+DNG+TEWE
Sbjct: 1   MDTTRIDKWCWAARFFKTRSQATEAVERGRIRLNGERTKPAHNVKAGDRLDVDNGATEWE 60

Query: 61  VLVTGIADKRGSAAIAATLYQETEESITRRAALAERHRLFREPSAEIKGRPTKRDRRLLD 120
           VLVTGIADKRGSAAIAATLYQETEESI RRAA AERHRLFREPSAEIKGRPTKRDRRLLD
Sbjct: 61  VLVTGIADKRGSAAIAATLYQETEESIARRAAQAERHRLFREPSAEIKGRPTKRDRRLLD 120

Query: 121 RSSS 124
           RSSS
Sbjct: 121 RSSS 124


>ref|XP_002535387.1| Cardiolipin synthetase, putative [Ricinus communis]
 gb|EEF26998.1| Cardiolipin synthetase, putative [Ricinus communis]
          Length = 501

 Score =  147 bits (371), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 72/116 (62%), Positives = 90/116 (77%)

Query: 2   DTTRIDKWCWAARFFKTRSQATEAVERGRIKLNGERTKPAHNVRNGDRLDIDNGSTEWEV 61
           D  R+DKW WAARFFKTRS A +AV+RGR+ +NG+R KPA NV+ GD L+IDNG+ +WEV
Sbjct: 371 DGVRLDKWLWAARFFKTRSLACDAVDRGRVIVNGDRAKPARNVKVGDVLEIDNGADQWEV 430

Query: 62  LVTGIADKRGSAAIAATLYQETEESITRRAALAERHRLFREPSAEIKGRPTKRDRR 117
            V G++D RG A +A  LY+ET+ S+ RRAA+AE  RL+REP   IKGRPTKRD R
Sbjct: 431 DVMGLSDVRGPAPVARNLYEETDVSVARRAAVAENRRLYREPGTTIKGRPTKRDAR 486


>ref|YP_004751190.1| ribosome-associated heat shock protein implicated in the recycling
           of the 50S subunit [Collimonas fungivorans Ter331]
 gb|AEK60367.1| Ribosome-associated heat shock protein implicated in the recycling
           of the 50S subunit [Collimonas fungivorans Ter331]
          Length = 128

 Score =  141 bits (356), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 77/124 (62%), Positives = 102/124 (82%)

Query: 1   MDTTRIDKWCWAARFFKTRSQATEAVERGRIKLNGERTKPAHNVRNGDRLDIDNGSTEWE 60
           ++  RIDKW WAARFFKTR+ A++A++ G+++LN ERTKPAHN+++GD L IDNG++ WE
Sbjct: 5   VEAVRIDKWLWAARFFKTRTLASDAIDNGKVRLNDERTKPAHNLKSGDILAIDNGASVWE 64

Query: 61  VLVTGIADKRGSAAIAATLYQETEESITRRAALAERHRLFREPSAEIKGRPTKRDRRLLD 120
           V V  ++D R SAAIA TLY+ETE+SI +RA LAE  R FREP+ ++KGRPTKRDRRLLD
Sbjct: 65  VAVLLLSDTRSSAAIAQTLYRETEQSIAKRATLAEDRRFFREPTMQLKGRPTKRDRRLLD 124

Query: 121 RSSS 124
           ++ S
Sbjct: 125 KTQS 128


>ref|YP_001101074.1| putative the heat shock protein Hsd15 [Herminiimonas
           arsenicoxydans]
 emb|CAL62953.1| Heat shock protein 15 homolog (HSP15) [Herminiimonas
           arsenicoxydans]
          Length = 126

 Score =  132 bits (331), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 72/122 (59%), Positives = 95/122 (77%)

Query: 2   DTTRIDKWCWAARFFKTRSQATEAVERGRIKLNGERTKPAHNVRNGDRLDIDNGSTEWEV 61
           ++ RIDKW WAARFFKTR+ A++AV+ G++++  ER KPA NVR GD + IDNGS+ WEV
Sbjct: 4   ESVRIDKWLWAARFFKTRTLASDAVDNGKVRIERERIKPARNVRCGDLVQIDNGSSVWEV 63

Query: 62  LVTGIADKRGSAAIAATLYQETEESITRRAALAERHRLFREPSAEIKGRPTKRDRRLLDR 121
           LV G++D RGSA +A  LY ETEESI +R   A++ + F+EP   IKGRPTKRDRRLLD+
Sbjct: 64  LVRGLSDVRGSAEMAQKLYAETEESIVKRQQEADKRKFFKEPGMTIKGRPTKRDRRLLDK 123

Query: 122 SS 123
           ++
Sbjct: 124 TN 125


>ref|YP_001354782.1| heat shock protein 15 [Janthinobacterium sp. Marseille]
 gb|ABR90405.1| heat shock protein 15 [Janthinobacterium sp. Marseille]
          Length = 126

 Score =  130 bits (327), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 71/122 (58%), Positives = 93/122 (76%)

Query: 2   DTTRIDKWCWAARFFKTRSQATEAVERGRIKLNGERTKPAHNVRNGDRLDIDNGSTEWEV 61
           +  R+DKW WAARFFKTRS AT+AV++G+++L  ER KPA  V+ GD L IDNGST WEV
Sbjct: 4   ENVRLDKWLWAARFFKTRSLATDAVDKGKVRLEQERIKPARTVKCGDLLQIDNGSTVWEV 63

Query: 62  LVTGIADKRGSAAIAATLYQETEESITRRAALAERHRLFREPSAEIKGRPTKRDRRLLDR 121
           +V  ++D RGSA +A  LY ETE+S+ +R   A++ + FREP   IKGRPTKRDRRLLD+
Sbjct: 64  VVQALSDVRGSAEMAQKLYAETEQSLKQRQQDADQRKFFREPGLGIKGRPTKRDRRLLDK 123

Query: 122 SS 123
           ++
Sbjct: 124 TN 125