BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3530.p (323 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774578.1| major facilitator superfamily permease [Herb... 503 e-140 ref|YP_004754172.1| major facilitator superfamily (MFS) transpor... 414 e-114 emb|CCA83798.1| monocarboxylate permease, transmembrane transpor... 370 e-100 ref|YP_003749088.1| monocarboxylate permease, transmembrane tran... 370 e-100 emb|CBJ39732.1| monocarboxylate permease, transmembrane transpor... 370 e-100 >ref|YP_003774578.1| major facilitator superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ62670.1| permease of the major facilitator superfamily protein [Herbaspirillum seropedicae SmR1] Length = 430 Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 274/293 (93%), Positives = 284/293 (96%) Query: 20 VAANTLGATIVSRWFETRRGLAMGLLTASAATGQMVFLPLMASMVGSYGWRSVAFLVSAV 79 VAANTLGATIVSRWFETRRGLAMGLLTASAATGQMVFLPLMA+MVGSYGWRSVAFLVSAV Sbjct: 126 VAANTLGATIVSRWFETRRGLAMGLLTASAATGQMVFLPLMAAMVGSYGWRSVAFLVSAV 185 Query: 80 ALLAIPLVWLLLPEGPSAIGQKMVGQTSETADDGRSKRNPLAIALDALRTSVRMPDFWLL 139 ALLAIPLVWLLLPE P+AIGQKM+GQTSE D+G S+RNPL IALDALRTSVRMPDFWLL Sbjct: 186 ALLAIPLVWLLLPESPAAIGQKMLGQTSEIKDEGLSRRNPLFIALDALRTSVRMPDFWLL 245 Query: 140 FMSFFVCGLSTNGYIGTQFIAMCNDYGINEVKGASILAAMGMLDLVGTTLSGWLSDRYNP 199 F SFFVCGLSTNGYIGTQFIAMCNDYGINEV ASILAAMGMLDLVGTTLSGWLSDRYNP Sbjct: 246 FASFFVCGLSTNGYIGTQFIAMCNDYGINEVSSASILAAMGMLDLVGTTLSGWLSDRYNP 305 Query: 200 RVLLFWYYGLRGLALIFLPYAFGLQYYGLAIFAIFYGLDWIATVPPTVRLANDVFGRLAA 259 RVLLFWYYGLRGLALIFLPYAFGLQYYGL IFAIFYGLDWIATVPPTVRLANDVFGRLAA Sbjct: 306 RVLLFWYYGLRGLALIFLPYAFGLQYYGLTIFAIFYGLDWIATVPPTVRLANDVFGRLAA 365 Query: 260 PIVFGWIVAGHQLGAATATTVAGYMRATLGNYTLSSIMMGVACLIGAVLVLRI 312 PIVFGWIVAGHQLGAATATT+AGY+RA+LGNYTLSSI+MGVACL+GAVLVLRI Sbjct: 366 PIVFGWIVAGHQLGAATATTLAGYLRASLGNYTLSSILMGVACLVGAVLVLRI 418 >ref|YP_004754172.1| major facilitator superfamily (MFS) transporter [Collimonas fungivorans Ter331] gb|AEK63349.1| Major facilitator superfamily (MFS) transporter, monocarboxylates [Collimonas fungivorans Ter331] Length = 435 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 223/297 (75%), Positives = 256/297 (86%), Gaps = 1/297 (0%) Query: 20 VAANTLGATIVSRWFETRRGLAMGLLTASAATGQMVFLPLMASMVGSYGWRSVAFLVSAV 79 VAANTL ATIVSRWFETRRGLAMGLLTAS+ATGQMVFLPLMA MV YGWRSVA LV++V Sbjct: 124 VAANTLAATIVSRWFETRRGLAMGLLTASSATGQMVFLPLMAYMVEHYGWRSVAMLVASV 183 Query: 80 ALLAIPLVWLLLPEGPSAIGQKMVGQTSETADDGRSK-RNPLAIALDALRTSVRMPDFWL 138 A LAIPLV + LPE P IG K GQ E + SK +NPL+IA +AL +V++ DFWL Sbjct: 184 AALAIPLVAIFLPERPQDIGMKRYGQFEELPPEAVSKSKNPLSIAFEALGKAVKIRDFWL 243 Query: 139 LFMSFFVCGLSTNGYIGTQFIAMCNDYGINEVKGASILAAMGMLDLVGTTLSGWLSDRYN 198 LF SFF+CG+STNGYIG+ FIAMC DYGI+ V GASILA MG+LDL GTT+SGWLSDR+N Sbjct: 244 LFFSFFICGMSTNGYIGSHFIAMCGDYGISAVGGASILATMGLLDLFGTTMSGWLSDRFN 303 Query: 199 PRVLLFWYYGLRGLALIFLPYAFGLQYYGLAIFAIFYGLDWIATVPPTVRLANDVFGRLA 258 RVLLFWYYGLRG+ALIFLP+AFGL Y+GL +FA+FYGLDWIATVPPTVRLANDVFGRLA Sbjct: 304 ARVLLFWYYGLRGVALIFLPHAFGLSYFGLPVFALFYGLDWIATVPPTVRLANDVFGRLA 363 Query: 259 APIVFGWIVAGHQLGAATATTVAGYMRATLGNYTLSSIMMGVACLIGAVLVLRIKGH 315 APIVFGWIVAGHQLGAA+AT +AG +R +LG+YTLSS++MG AC++ AV+VLRIKGH Sbjct: 364 APIVFGWIVAGHQLGAASATMLAGSLRNSLGSYTLSSVLMGAACIVAAVMVLRIKGH 420 >emb|CCA83798.1| monocarboxylate permease, transmembrane transport protein of the MFS family [blood disease bacterium R229] Length = 432 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 199/308 (64%), Positives = 243/308 (78%), Gaps = 5/308 (1%) Query: 21 AANTLGATIVSRWFETRRGLAMGLLTASAATGQMVFLPLMASMVGSYGWRSVAFLVSAVA 80 AA TLGAT+V+RWF T RGLAMG+LTAS+ATGQ+VFLP+MA++V +GWR V +V+ Sbjct: 123 AAITLGATVVNRWFTTHRGLAMGILTASSATGQLVFLPMMAAVVEHHGWRPVVLIVAGAL 182 Query: 81 LLAIPLVWLLLPEGPSAIGQKMVGQTSETAD-DGRSKRNPLAIALDALRTSVRMPDFWLL 139 L +P+V LLPE P ++G + G+ ++ + D + NP+ +A+ L ++R DFWLL Sbjct: 183 ALLLPIVGFLLPESPKSVGLRTYGEPADAPEADHGPRANPITLAMHTLVQAMRKRDFWLL 242 Query: 140 FMSFFVCGLSTNGYIGTQFIAMCNDYGINEVKGASILAAMGMLDLVGTTLSGWLSDRYNP 199 F SFF+CG STNGYIGT FIAMC D+G+ EVKGAS+LAAMG+ DLVGTTLSGWLSDRYN Sbjct: 243 FASFFICGASTNGYIGTHFIAMCADHGLTEVKGASLLAAMGIFDLVGTTLSGWLSDRYNS 302 Query: 200 RVLLFWYYGLRGLALIFLPYAFGLQYYGLAIFAIFYGLDWIATVPPTVRLANDVFGRLAA 259 RVLLFWYYGLRGL+LI+LPYAFG +++GL +FAIFYGLDWIATVPPTVRL NDVFG+ AA Sbjct: 303 RVLLFWYYGLRGLSLIYLPYAFGFEFFGLPVFAIFYGLDWIATVPPTVRLTNDVFGKAAA 362 Query: 260 PIVFGWIVAGHQLGAATATTVAGYMRATLGNYTLSSIMMGVACLIGAVLVLRI----KGH 315 PIVFGWIVAGHQLGAA AT AG MRA+LGNYT++S++ G C+ GA LVLRI K Sbjct: 363 PIVFGWIVAGHQLGAAFATLGAGLMRASLGNYTVASMISGGLCVAGAFLVLRIHRQRKPD 422 Query: 316 SGAQPQPA 323 A QPA Sbjct: 423 EEASGQPA 430 >ref|YP_003749088.1| monocarboxylate permease, transmembrane transport protein of the mfs family [Ralstonia solanacearum PSI07] emb|CBJ34435.1| monocarboxylate permease, transmembrane transport protein of the MFS family [Ralstonia solanacearum PSI07] emb|CCA87400.1| monocarboxylate permease, transmembrane transport protein of the MFS family [Ralstonia syzygii R24] Length = 432 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 198/308 (64%), Positives = 243/308 (78%), Gaps = 5/308 (1%) Query: 21 AANTLGATIVSRWFETRRGLAMGLLTASAATGQMVFLPLMASMVGSYGWRSVAFLVSAVA 80 AA TLGAT+V+RWF T RGLAMG+LTAS+ATGQ+VFLP+MA++V +GWR V +V+ Sbjct: 123 AAITLGATVVNRWFTTHRGLAMGILTASSATGQLVFLPMMAAVVEHHGWRPVVLIVAGAL 182 Query: 81 LLAIPLVWLLLPEGPSAIGQKMVGQTSETAD-DGRSKRNPLAIALDALRTSVRMPDFWLL 139 L +P+V LLPE P ++G + G+ ++ + D + NP+ +A+ L ++R DFWLL Sbjct: 183 ALLLPIVGFLLPESPKSVGLRTYGEPADAPEADHGPRANPITLAMHTLVQAMRKRDFWLL 242 Query: 140 FMSFFVCGLSTNGYIGTQFIAMCNDYGINEVKGASILAAMGMLDLVGTTLSGWLSDRYNP 199 F SFF+CG STNGYIGT FIAMC D+G+ EVKGAS+LAAMG+ DL+GTTLSGWLSDRYN Sbjct: 243 FASFFICGASTNGYIGTHFIAMCADHGLTEVKGASLLAAMGIFDLIGTTLSGWLSDRYNS 302 Query: 200 RVLLFWYYGLRGLALIFLPYAFGLQYYGLAIFAIFYGLDWIATVPPTVRLANDVFGRLAA 259 RVLLFWYYGLRGL+LI+LPYAFG +++GL +FAIFYGLDWIATVPPTVRL NDVFG+ AA Sbjct: 303 RVLLFWYYGLRGLSLIYLPYAFGFEFFGLPVFAIFYGLDWIATVPPTVRLTNDVFGKAAA 362 Query: 260 PIVFGWIVAGHQLGAATATTVAGYMRATLGNYTLSSIMMGVACLIGAVLVLRI----KGH 315 PIVFGWIVAGHQLGAA AT AG MRA+LGNYT++S++ G C+ GA LVLRI K Sbjct: 363 PIVFGWIVAGHQLGAAFATLGAGLMRASLGNYTVASMISGGLCVAGAFLVLRIHRQRKPD 422 Query: 316 SGAQPQPA 323 A QPA Sbjct: 423 EEASGQPA 430 >emb|CBJ39732.1| monocarboxylate permease, transmembrane transport protein of the MFS family [Ralstonia solanacearum CMR15] Length = 432 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 200/308 (64%), Positives = 244/308 (79%), Gaps = 5/308 (1%) Query: 21 AANTLGATIVSRWFETRRGLAMGLLTASAATGQMVFLPLMASMVGSYGWRSVAFLVSAVA 80 AA TLGAT+V+RWF + RGLAMG+LTAS+ATGQ+VFLP+MA++V +GWR V +V+ Sbjct: 123 AAITLGATVVNRWFTSHRGLAMGILTASSATGQLVFLPMMAAVVERHGWRPVVLIVAGAL 182 Query: 81 LLAIPLVWLLLPEGPSAIGQKMVGQTSETAD-DGRSKRNPLAIALDALRTSVRMPDFWLL 139 +L +P+V LLPE P ++G + G ++ + D + NP+ +AL L ++R DFWLL Sbjct: 183 VLLLPIVGFLLPESPKSVGLRTYGAPADAPEADHGPRTNPITLALHTLMQAMRKRDFWLL 242 Query: 140 FMSFFVCGLSTNGYIGTQFIAMCNDYGINEVKGASILAAMGMLDLVGTTLSGWLSDRYNP 199 F SFF+CG STNGYIGT FIAMC D+G+ EVKGAS+LAAMG+ DLVGTTLSGWLSDRYN Sbjct: 243 FASFFICGASTNGYIGTHFIAMCADHGMTEVKGASLLAAMGIFDLVGTTLSGWLSDRYNS 302 Query: 200 RVLLFWYYGLRGLALIFLPYAFGLQYYGLAIFAIFYGLDWIATVPPTVRLANDVFGRLAA 259 RVLLFWYYGLRGL+LI+LPYAFG +++GL +FAIFYGLDWIATVPPTVRL NDVFG+ AA Sbjct: 303 RVLLFWYYGLRGLSLIYLPYAFGFEFFGLPVFAIFYGLDWIATVPPTVRLTNDVFGKAAA 362 Query: 260 PIVFGWIVAGHQLGAATATTVAGYMRATLGNYTLSSIMMGVACLIGAVLVLRI----KGH 315 PIVFGWIVAGHQLGAA AT AG MRA+LGNYTL+S++ G C+ GA LVLRI K Sbjct: 363 PIVFGWIVAGHQLGAAFATLGAGLMRASLGNYTLASMISGGLCVAGAFLVLRIHRQRKPD 422 Query: 316 SGAQPQPA 323 + A QPA Sbjct: 423 AEASGQPA 430