BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3510.p         (89 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004752429.1| hypothetical protein CFU_1774 [Collimonas fu...    89   2e-16
emb|CAQ36336.1| conserved hypothetical protein [Ralstonia solana...    82   2e-14
ref|YP_003745544.1| hypothetical protein RCFBP_11638 [Ralstonia ...    82   3e-14
ref|YP_001353085.1| hypothetical protein mma_1395 [Janthinobacte...    77   1e-12
ref|YP_001100198.1| hypothetical protein HEAR1924 [Herminiimonas...    77   1e-12

>ref|YP_004752429.1| hypothetical protein CFU_1774 [Collimonas fungivorans Ter331]
 gb|AEK61606.1| hypothetical protein CFU_1774 [Collimonas fungivorans Ter331]
          Length = 86

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/80 (62%), Positives = 63/80 (78%), Gaps = 3/80 (3%)

Query: 1  MVIVAIAWLYVVFMMSITEQSAVAGVATFLLYGIIPLTIVLYLMGTPQRKRNRQKMK--- 57
          M IVAIAW+YVVFMM+ITE + VAGV TFLLYG+ PLTIVLYLMGTP+RKRNRQ+ +   
Sbjct: 1  MYIVAIAWIYVVFMMAITEATPVAGVMTFLLYGVFPLTIVLYLMGTPKRKRNRQRAENSD 60

Query: 58 KLTAERKEEIKDDSSVKRES 77
          +L A++K      +SV +E+
Sbjct: 61 RLAAQQKAAPTVPASVPQEN 80


>emb|CAQ36336.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
          Length = 71

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/61 (62%), Positives = 49/61 (80%)

Query: 1  MVIVAIAWLYVVFMMSITEQSAVAGVATFLLYGIIPLTIVLYLMGTPQRKRNRQKMKKLT 60
          M IVAIAWLYVV MMS+TEQS +AG+ TF+LYG+ PL++VL+L GTP RKR R+  ++  
Sbjct: 1  MYIVAIAWLYVVLMMSLTEQSWIAGIGTFILYGVAPLSLVLWLAGTPARKRRRKAQERQA 60

Query: 61 A 61
          A
Sbjct: 61 A 61


>ref|YP_003745544.1| hypothetical protein RCFBP_11638 [Ralstonia solanacearum
          CFBP2957]
 emb|CBJ42929.1| conserved protein of unknown function [Ralstonia solanacearum
          CFBP2957]
          Length = 71

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/61 (62%), Positives = 49/61 (80%)

Query: 1  MVIVAIAWLYVVFMMSITEQSAVAGVATFLLYGIIPLTIVLYLMGTPQRKRNRQKMKKLT 60
          M IVAIAWLYVV MMS+TEQS +AG+ TF+LYG+ PL++VL+L GTP RKR R+  ++  
Sbjct: 1  MYIVAIAWLYVVLMMSLTEQSWIAGIGTFILYGVAPLSLVLWLAGTPARKRRRKAQERQA 60

Query: 61 A 61
          A
Sbjct: 61 A 61


>ref|YP_001353085.1| hypothetical protein mma_1395 [Janthinobacterium sp. Marseille]
 gb|ABR91726.1| Uncharacterized conserved protein [Janthinobacterium sp.
          Marseille]
          Length = 81

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/74 (54%), Positives = 56/74 (75%), Gaps = 3/74 (4%)

Query: 1  MVIVAIAWLYVVFMMSITEQSAVAGVATFLLYGIIPLTIVLYLMGTPQRKRNRQKMKKLT 60
          M IVAIAW+YVVFMM+ITE S VAG+ TFLLYG++P+TI++Y+MGT +RKR R   +   
Sbjct: 1  MYIVAIAWIYVVFMMAITETSVVAGIMTFLLYGVVPVTIIVYVMGTGRRKRKRHAQE--- 57

Query: 61 AERKEEIKDDSSVK 74
           +R+ +I++    K
Sbjct: 58 MQRRAQIRESEEAK 71


>ref|YP_001100198.1| hypothetical protein HEAR1924 [Herminiimonas arsenicoxydans]
 emb|CAL62074.1| Conserved hypothetical protein; putative membrane protein
          [Herminiimonas arsenicoxydans]
          Length = 74

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/75 (52%), Positives = 59/75 (78%), Gaps = 3/75 (4%)

Query: 1  MVIVAIAWLYVVFMMSITEQSAVAGVATFLLYGIIPLTIVLYLMGTPQRKRNRQKMKKLT 60
          M I+AIAW+YVVFMMSI E S +AG+ TFLLYG++P++I++Y+MGT QRKR R+  +   
Sbjct: 1  MYIIAIAWIYVVFMMSIMETSVIAGIMTFLLYGVLPVSIIVYVMGTGQRKRKRRAQE--- 57

Query: 61 AERKEEIKDDSSVKR 75
           +R+EEI +++  ++
Sbjct: 58 MQRREEIMNNAEREK 72