BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3501.p (264 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776383.1| hypothetical protein Hsero_2987 [Herbaspiril... 266 2e-69 ref|YP_001353790.1| hypothetical protein mma_2100 [Janthinobacte... 218 1e-54 ref|YP_001099596.1| hypothetical protein HEAR1296 [Herminiimonas... 215 6e-54 ref|YP_003050570.1| hypothetical protein Msip34_0795 [Methylovor... 208 6e-52 ref|YP_004039251.1| hypothetical protein MPQ_0844 [Methylovorus ... 207 9e-52 >ref|YP_003776383.1| hypothetical protein Hsero_2987 [Herbaspirillum seropedicae SmR1] gb|ADJ64475.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 159 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 137/159 (86%), Positives = 147/159 (92%) Query: 106 MLVLFWSTFRSQVPFYPSGQSAWDAVAGLLPEGRPIRFMDIGSGLGGAVLDLSRRRPESE 165 ML+LFWSTFRSQVPFYPSGQ+AWDAVAGLLP R IRF+DIGSGLGGAVLDL+RRRPESE Sbjct: 1 MLLLFWSTFRSQVPFYPSGQAAWDAVAGLLPADRAIRFLDIGSGLGGAVLDLARRRPESE 60 Query: 166 FTGIEIAPLPWLVSRLRAALAGNRCRFVRGDYLLLDFGDYDVVFAYLSPAAMEALWHKAR 225 F GIEIAPLPWLVSRLRAAL +RCRFVRGDYLLLDF DYDV+FAYLSPAAM ALW KAR Sbjct: 61 FIGIEIAPLPWLVSRLRAALGRHRCRFVRGDYLLLDFADYDVIFAYLSPAAMVALWRKAR 120 Query: 226 AEMKPGTLLLSYEFHIPGTTPDVVVEPEDGGRVLHGWRM 264 AEM+PG+LLLSYEFHIPG TPDVV++PE GG VLHGWRM Sbjct: 121 AEMRPGSLLLSYEFHIPGATPDVVIQPEGGGPVLHGWRM 159 >ref|YP_001353790.1| hypothetical protein mma_2100 [Janthinobacterium sp. Marseille] gb|ABR91019.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 266 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 137/252 (54%), Positives = 169/252 (67%) Query: 13 RPLWQAPAIQALLLFVLGLIGANVLDVLFQRAGLAPLSPLQTSLLHGVIAALLARLRCMA 72 R ++Q PA+QALL + +L A ++ L + L GVIAA L+ R +A Sbjct: 15 RTVFQIPAVQALLFQISSFFIVLLLAYSLAAATGWSMNVLVAACLQGVIAAGLSWWRGLA 74 Query: 73 AWWWLILLVFPLAALGVGQLHLPSWVFLAVFLFMLVLFWSTFRSQVPFYPSGQSAWDAVA 132 WW LI L+F L L ++FLA FL +L L+WSTFR+QVP+YPS + W AV Sbjct: 75 PWWLLIQLLFLPVLLLTLTLQWSPFIFLAAFLVLLFLYWSTFRTQVPYYPSRLTTWQAVE 134 Query: 133 GLLPEGRPIRFMDIGSGLGGAVLDLSRRRPESEFTGIEIAPLPWLVSRLRAALAGNRCRF 192 GLLP + I F+DIGSGLGG V+ L+RRRPES F GIEIAPLPWL+S LRA + F Sbjct: 135 GLLPPEQKISFIDIGSGLGGLVMSLARRRPESRFVGIEIAPLPWLISSLRARFGASGAHF 194 Query: 193 VRGDYLLLDFGDYDVVFAYLSPAAMEALWHKARAEMKPGTLLLSYEFHIPGTTPDVVVEP 252 RGDY L+F DYDVVFAYLSPAAM LW KA+AEM+ GTLLLSYEF IPGTTPD+V+ P Sbjct: 195 ERGDYGRLNFADYDVVFAYLSPAAMPNLWRKAKAEMRSGTLLLSYEFIIPGTTPDIVLSP 254 Query: 253 EDGGRVLHGWRM 264 + G L+GWR+ Sbjct: 255 DASGVQLYGWRI 266 >ref|YP_001099596.1| hypothetical protein HEAR1296 [Herminiimonas arsenicoxydans] emb|CAL61469.1| Conserved hypothetical protein, putative SAM-dependent methyltransferase [Herminiimonas arsenicoxydans] Length = 266 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 138/259 (53%), Positives = 171/259 (66%), Gaps = 8/259 (3%) Query: 10 AGRRPLWQAPAIQAL----LLFVLGLIGANVLDVLFQRAGLAPLSPLQTSLLHGVIAALL 65 A ++ PA+QAL L F L+ A L +F G+A ++ + L G++AA Sbjct: 12 ASPESVFHLPAVQALFFQILSFFFVLLIARSLVAIF---GIA-VNLWLAAFLQGLLAAGF 67 Query: 66 ARLRCMAAWWWLILLVFPLAALGVGQLHLPSWVFLAVFLFMLVLFWSTFRSQVPFYPSGQ 125 + R +A+WW I L FPL L L L +F+ FL +L L+W+TFR+QVPFYPSG Sbjct: 68 SYWRKLASWWLAIQLFFPLLLLFALSLQLSPTLFMLGFLVLLFLYWTTFRTQVPFYPSGL 127 Query: 126 SAWDAVAGLLPEGRPIRFMDIGSGLGGAVLDLSRRRPESEFTGIEIAPLPWLVSRLRAAL 185 + W AVA LLP+ R IRF+D+GSGLGG L+L++RRP+ EFTGIEIAPLPWLVS LR L Sbjct: 128 ATWHAVAELLPQERAIRFVDVGSGLGGLTLNLAKRRPDGEFTGIEIAPLPWLVSVLRTLL 187 Query: 186 AGNRCRFVRGDYLLLDFGDYDVVFAYLSPAAMEALWHKARAEMKPGTLLLSYEFHIPGTT 245 +R RF RGDY LDF YDVVFAYLSP AM ALW KARAEM+ GTLLLSYEF IP Sbjct: 188 TRSRVRFKRGDYRHLDFAAYDVVFAYLSPVAMPALWEKARAEMRAGTLLLSYEFPIPDVV 247 Query: 246 PDVVVEPEDGGRVLHGWRM 264 P +VV P R ++ WRM Sbjct: 248 PTMVVTPLVKHRRIYCWRM 266 >ref|YP_003050570.1| hypothetical protein Msip34_0795 [Methylovorus glucosetrophus SIP3-4] gb|ACT50043.1| hypothetical protein Msip34_0795 [Methylovorus glucosetrophus SIP3-4] Length = 258 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 125/247 (50%), Positives = 162/247 (65%), Gaps = 2/247 (0%) Query: 19 PAIQALLLFVLGLIGANVLDVLFQRAGLAPLSPLQT-SLLHGVIAALLARLRCMAAWWWL 77 PA ALL+ LG++G N+L L P L+ V A +LARL MA+WW L Sbjct: 10 PATLALLI-QLGMLGINLLIALLFGQLTGRAYPFWLLVLIQAVGAYVLARLWGMASWWRL 68 Query: 78 ILLVFPLAALGVGQLHLPSWVFLAVFLFMLVLFWSTFRSQVPFYPSGQSAWDAVAGLLPE 137 I L FPL + QLHLP+WV+LA FLF L+LFW+TFR+QVPFYPS + W V +P Sbjct: 69 IHLFFPLVVWLMVQLHLPNWVYLAGFLFSLMLFWTTFRTQVPFYPSFPAVWQQVLAWMPA 128 Query: 138 GRPIRFMDIGSGLGGAVLDLSRRRPESEFTGIEIAPLPWLVSRLRAALAGNRCRFVRGDY 197 + +R +DIGSGLG + +++ RP+ + GIE+APLPWL+S R + RFV GDY Sbjct: 129 RQGLRMIDIGSGLGDMAMHIAKVRPDCQMLGIEVAPLPWLISHARGRWRRSSARFVLGDY 188 Query: 198 LLLDFGDYDVVFAYLSPAAMEALWHKARAEMKPGTLLLSYEFHIPGTTPDVVVEPEDGGR 257 LDF ++DVVFAYLSPAAM ALW KA +EM+PG+LL+SYEF IPG P + + G+ Sbjct: 189 HKLDFREFDVVFAYLSPAAMPALWQKASSEMRPGSLLISYEFEIPGVPPALQQPIGETGK 248 Query: 258 VLHGWRM 264 VL+GW M Sbjct: 249 VLYGWIM 255 >ref|YP_004039251.1| hypothetical protein MPQ_0844 [Methylovorus sp. MP688] gb|ADQ84015.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 258 Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 125/247 (50%), Positives = 163/247 (65%), Gaps = 2/247 (0%) Query: 19 PAIQALLLFVLGLIGANVLDVLFQRAGLAPLSPLQT-SLLHGVIAALLARLRCMAAWWWL 77 PA ALL+ LG++G N++ L + P L+ V A LLARL MA+WW L Sbjct: 10 PATLALLI-QLGMLGINLVIALLFGQLTGRVYPFWLLVLIQAVGAYLLARLWGMASWWRL 68 Query: 78 ILLVFPLAALGVGQLHLPSWVFLAVFLFMLVLFWSTFRSQVPFYPSGQSAWDAVAGLLPE 137 I L FPL + QLHLP+WV+LA FLF L+LFW+TFR+QVPFYPS + W V +P Sbjct: 69 IHLFFPLVVWLMVQLHLPNWVYLAGFLFSLMLFWTTFRTQVPFYPSFPAVWRQVLAWMPA 128 Query: 138 GRPIRFMDIGSGLGGAVLDLSRRRPESEFTGIEIAPLPWLVSRLRAALAGNRCRFVRGDY 197 + +R +DIGSGLG + +++ RP+ + GIE+APLPWL+S R + RFV GDY Sbjct: 129 RQGLRMIDIGSGLGDMAMHIAKVRPDCQMLGIEVAPLPWLISHARGRWRRSSPRFVLGDY 188 Query: 198 LLLDFGDYDVVFAYLSPAAMEALWHKARAEMKPGTLLLSYEFHIPGTTPDVVVEPEDGGR 257 LDF ++DVVFAYLSPAAM ALW KA +EM+PG+LL+SYEF IPG P + + G+ Sbjct: 189 HKLDFREFDVVFAYLSPAAMPALWQKASSEMRPGSLLISYEFEIPGVPPALQQPIGETGK 248 Query: 258 VLHGWRM 264 VL+GW M Sbjct: 249 VLYGWIM 255