BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3500.p (276 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776382.1| flagellar motor component protein [Herbaspir... 510 e-142 ref|ZP_08274541.1| Flagellar motor rotation protein MotA [Oxalob... 460 e-127 ref|YP_001353789.1| flagellar motor protein MotA [Janthinobacter... 458 e-127 emb|CAL61470.2| Chemotaxis protein MotA (Motility protein A) [He... 456 e-126 ref|YP_004039255.1| flagellar motor protein mota [Methylovorus s... 438 e-121 >ref|YP_003776382.1| flagellar motor component protein [Herbaspirillum seropedicae SmR1] gb|ADJ64474.1| flagellar motor component protein [Herbaspirillum seropedicae SmR1] Length = 286 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 273/276 (98%), Positives = 274/276 (99%) Query: 1 MASVFGGFAMAGGHLGALFQPIELLMIGGAAGGAFLVGNNNKAIKATLKALPTVFKGSTY 60 MASVFGGFAMAGGHLGALFQPIELLMIGGAAGGAFLVGNN KAIKATLKALPTVFKGS Y Sbjct: 11 MASVFGGFAMAGGHLGALFQPIELLMIGGAAGGAFLVGNNGKAIKATLKALPTVFKGSAY 70 Query: 61 TKALYMELMALLFEILTKSRKEGLMSIEGDIEEPESSPIFSKYPGVLADHHLIEFMTDYL 120 TKALYMELMALLFEILTKSRKEGLMSIEGDIEEPESSPIFSKYPGVLADHHLIEFMTDYL Sbjct: 71 TKALYMELMALLFEILTKSRKEGLMSIEGDIEEPESSPIFSKYPGVLADHHLIEFMTDYL 130 Query: 121 RLMVSGNMDAFQIENLMDNEIETHHHEGEIPVHCIAKLGDGMPAFGIVAAVMGVVHTMES 180 RLMVSGNMDAFQIENLMDNEIETHHHEGEIPVHCIAKLGDGMPAFGIVAAVMGVVHTMES Sbjct: 131 RLMVSGNMDAFQIENLMDNEIETHHHEGEIPVHCIAKLGDGMPAFGIVAAVMGVVHTMES 190 Query: 181 VGIPPSELGMLIAHALVGTFLGILLAYGFVGPLSSLLEQKLHESTKIYQCVKVTLLASLN 240 VGIPPSELGMLIAHALVGTFLGILLAYGFVGPLSSLLEQKLHESTKIYQCVKVTLLASLN Sbjct: 191 VGIPPSELGMLIAHALVGTFLGILLAYGFVGPLSSLLEQKLHESTKIYQCVKVTLLASLN 250 Query: 241 GYAPALSIEFGRKVLFSTERPTFLELEEHVKQAKGK 276 GYAPALSIEFGRKVLFSTERPTFLELEEHVKQA+GK Sbjct: 251 GYAPALSIEFGRKVLFSTERPTFLELEEHVKQARGK 286 >ref|ZP_08274541.1| Flagellar motor rotation protein MotA [Oxalobacteraceae bacterium IMCC9480] gb|EGF31987.1| Flagellar motor rotation protein MotA [Oxalobacteraceae bacterium IMCC9480] Length = 286 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 235/276 (85%), Positives = 261/276 (94%) Query: 1 MASVFGGFAMAGGHLGALFQPIELLMIGGAAGGAFLVGNNNKAIKATLKALPTVFKGSTY 60 M SVFGGFAMAGGHL AL+QP+ELLMIGGAA GAFLVGNN KA+KATL+A+PT+FKGS + Sbjct: 11 MLSVFGGFAMAGGHLAALWQPLELLMIGGAALGAFLVGNNGKAMKATLQAVPTLFKGSKF 70 Query: 61 TKALYMELMALLFEILTKSRKEGLMSIEGDIEEPESSPIFSKYPGVLADHHLIEFMTDYL 120 TK+LYM+LM+L+FEILTK RKEGLMSIEGD+E+PE SPIFSKYP +L DHH++EF+TDYL Sbjct: 71 TKSLYMDLMSLMFEILTKVRKEGLMSIEGDVEKPEESPIFSKYPSILHDHHVVEFITDYL 130 Query: 121 RLMVSGNMDAFQIENLMDNEIETHHHEGEIPVHCIAKLGDGMPAFGIVAAVMGVVHTMES 180 RLMVSGNMDAFQIENLMDNEIETHHHEG +P HCIAKLGDG+PAFGIVAAVMGVVHTMES Sbjct: 131 RLMVSGNMDAFQIENLMDNEIETHHHEGAVPAHCIAKLGDGLPAFGIVAAVMGVVHTMES 190 Query: 181 VGIPPSELGMLIAHALVGTFLGILLAYGFVGPLSSLLEQKLHESTKIYQCVKVTLLASLN 240 V +PP+ELGMLIAHALVGTFLGILLAYGFVGPL+SLLEQKL ESTKIYQC+KVTLLASLN Sbjct: 191 VSLPPAELGMLIAHALVGTFLGILLAYGFVGPLASLLEQKLDESTKIYQCIKVTLLASLN 250 Query: 241 GYAPALSIEFGRKVLFSTERPTFLELEEHVKQAKGK 276 GYAPAL+IEFGRKVLFSTERPTF ELEEH+KQ+K K Sbjct: 251 GYAPALAIEFGRKVLFSTERPTFGELEEHIKQSKSK 286 >ref|YP_001353789.1| flagellar motor protein MotA [Janthinobacterium sp. Marseille] gb|ABR88811.1| MotA chemotaxis protein [Janthinobacterium sp. Marseille] Length = 286 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 237/274 (86%), Positives = 258/274 (94%) Query: 3 SVFGGFAMAGGHLGALFQPIELLMIGGAAGGAFLVGNNNKAIKATLKALPTVFKGSTYTK 62 SVFGGFA+AGGHL ALFQP+ELLMIGGAA GAF VGNN KAIKATLKALP+VFKGS YTK Sbjct: 13 SVFGGFALAGGHLAALFQPLELLMIGGAAVGAFFVGNNGKAIKATLKALPSVFKGSRYTK 72 Query: 63 ALYMELMALLFEILTKSRKEGLMSIEGDIEEPESSPIFSKYPGVLADHHLIEFMTDYLRL 122 +LYMELM LLFEILTK RKEGLMSIEGDIE PE S IF+KYP VLADHH IEFMTDYLRL Sbjct: 73 SLYMELMTLLFEILTKVRKEGLMSIEGDIEAPEESAIFAKYPTVLADHHTIEFMTDYLRL 132 Query: 123 MVSGNMDAFQIENLMDNEIETHHHEGEIPVHCIAKLGDGMPAFGIVAAVMGVVHTMESVG 182 MVSGNMDAFQIENLMDNEIETHH EGE+PVHC+AK+GDG+PAFGIVAAVMGVVHTMESVG Sbjct: 133 MVSGNMDAFQIENLMDNEIETHHAEGEVPVHCVAKVGDGLPAFGIVAAVMGVVHTMESVG 192 Query: 183 IPPSELGMLIAHALVGTFLGILLAYGFVGPLSSLLEQKLHESTKIYQCVKVTLLASLNGY 242 +PP+ELGMLIAHALVGTFLGILL+YGFV PLSSLLEQKLHES+KI+QCVKVTLLASLNGY Sbjct: 193 LPPAELGMLIAHALVGTFLGILLSYGFVTPLSSLLEQKLHESSKIFQCVKVTLLASLNGY 252 Query: 243 APALSIEFGRKVLFSTERPTFLELEEHVKQAKGK 276 APAL++EFGRKVLFSTERP+F E+EEH++Q+K K Sbjct: 253 APALAVEFGRKVLFSTERPSFSEMEEHIRQSKSK 286 >emb|CAL61470.2| Chemotaxis protein MotA (Motility protein A) [Herminiimonas arsenicoxydans] Length = 286 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 231/276 (83%), Positives = 258/276 (93%) Query: 1 MASVFGGFAMAGGHLGALFQPIELLMIGGAAGGAFLVGNNNKAIKATLKALPTVFKGSTY 60 +ASVFGGFA+AGGHL +LFQP+ELLMIGGAA GAF VGNN+KAIKAT KALP VFKGS Y Sbjct: 11 LASVFGGFALAGGHLSSLFQPVELLMIGGAAAGAFFVGNNSKAIKATFKALPNVFKGSKY 70 Query: 61 TKALYMELMALLFEILTKSRKEGLMSIEGDIEEPESSPIFSKYPGVLADHHLIEFMTDYL 120 TK+LYMELM LLFEILTK RKEGLMSIEGDI+ PE S IF+KYP VLADHH+IEF+TDYL Sbjct: 71 TKSLYMELMTLLFEILTKVRKEGLMSIEGDIDAPEESAIFTKYPTVLADHHIIEFITDYL 130 Query: 121 RLMVSGNMDAFQIENLMDNEIETHHHEGEIPVHCIAKLGDGMPAFGIVAAVMGVVHTMES 180 RLMVSGNMDAFQIENLMDNEI+THH EGEIPVHCIAK+GDG+PAFGIVAAVMGVVHTM S Sbjct: 131 RLMVSGNMDAFQIENLMDNEIDTHHAEGEIPVHCIAKMGDGLPAFGIVAAVMGVVHTMAS 190 Query: 181 VGIPPSELGMLIAHALVGTFLGILLAYGFVGPLSSLLEQKLHESTKIYQCVKVTLLASLN 240 VG+PP+ELG+LIA+ALVGTFLGILLAYGFV PLSS LEQKLHES+K++QC+KVTLLASLN Sbjct: 191 VGLPPAELGILIANALVGTFLGILLAYGFVSPLSSTLEQKLHESSKVFQCIKVTLLASLN 250 Query: 241 GYAPALSIEFGRKVLFSTERPTFLELEEHVKQAKGK 276 GYAPAL++EFGRKVLFSTERP+F ELE+H+KQ+K K Sbjct: 251 GYAPALAVEFGRKVLFSTERPSFSELEDHIKQSKSK 286 >ref|YP_004039255.1| flagellar motor protein mota [Methylovorus sp. MP688] gb|ADQ84019.1| flagellar motor protein MotA [Methylovorus sp. MP688] Length = 278 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 220/276 (79%), Positives = 256/276 (92%) Query: 1 MASVFGGFAMAGGHLGALFQPIELLMIGGAAGGAFLVGNNNKAIKATLKALPTVFKGSTY 60 +A+VFGG+A+AGGHLGAL+QP+E+LMI G A GAF+VGNN KA+KATL ALPT+FKGS + Sbjct: 3 LAAVFGGYALAGGHLGALWQPLEVLMIFGGAIGAFIVGNNGKALKATLGALPTLFKGSKF 62 Query: 61 TKALYMELMALLFEILTKSRKEGLMSIEGDIEEPESSPIFSKYPGVLADHHLIEFMTDYL 120 TKALYM+L+ALLFEIL+K RK+G+MSIE D+E PESSP+FSKYP + ADHHL+EF+TDYL Sbjct: 63 TKALYMDLLALLFEILSKIRKDGMMSIENDVENPESSPLFSKYPALQADHHLMEFITDYL 122 Query: 121 RLMVSGNMDAFQIENLMDNEIETHHHEGEIPVHCIAKLGDGMPAFGIVAAVMGVVHTMES 180 RLM+SGNMDAFQ+ENLMDNEIETHH EG +PVHCIA+LGDG+PAFGIVAAVMGVVHTME+ Sbjct: 123 RLMISGNMDAFQVENLMDNEIETHHQEGHVPVHCIARLGDGLPAFGIVAAVMGVVHTMEN 182 Query: 181 VGIPPSELGMLIAHALVGTFLGILLAYGFVGPLSSLLEQKLHESTKIYQCVKVTLLASLN 240 V +PP+ELG+LIAHALVGTFLGILLAYGF+GPLSSLLEQKL ESTK+YQ VK TLLASLN Sbjct: 183 VALPPAELGILIAHALVGTFLGILLAYGFIGPLSSLLEQKLDESTKMYQTVKATLLASLN 242 Query: 241 GYAPALSIEFGRKVLFSTERPTFLELEEHVKQAKGK 276 GYAPA+++EFGRKVL+STERP F ELEEHVKQAK K Sbjct: 243 GYAPAIAVEFGRKVLYSTERPGFTELEEHVKQAKSK 278