BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3492.p (180 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776374.1| hypothetical protein Hsero_2978 [Herbaspiril... 198 3e-49 ref|YP_004752396.1| hypothetical protein CFU_1741 [Collimonas fu... 139 2e-31 ref|YP_001353192.1| hypothetical protein mma_1502 [Janthinobacte... 130 1e-28 ref|YP_001100063.1| putative signal peptide protein [Herminiimon... 125 2e-27 ref|ZP_08273488.1| putative signal peptide protein [Oxalobactera... 122 3e-26 >ref|YP_003776374.1| hypothetical protein Hsero_2978 [Herbaspirillum seropedicae SmR1] gb|ADJ64466.1| exported signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 182 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 121/164 (73%), Positives = 130/164 (79%), Gaps = 3/164 (1%) Query: 1 MKKYLTALTLASALCAI-GMPSAFAETGAPAATATKKQPAKKKAAHPKAAAAAAKPAEKM 59 MKK+LT + L AL A G+ +A AET A K AAAAAA PA KM Sbjct: 1 MKKHLTLIALLGALFATAGITAAHAETDTKPAAKKKVVKKAPAKK--AAAAAAAAPAAKM 58 Query: 60 ALSSDADDDENEPEIGGTKSADFQCEMGHKLTIWKNEADDKHIAIRWDKRIHRLTRVETT 119 SSDA+DD++EPE+GGT SADFQCEMGHKLTIWKNE DDKHIAIRWDKRIHRLTRVETT Sbjct: 59 PFSSDAEDDDSEPELGGTLSADFQCEMGHKLTIWKNETDDKHIAIRWDKRIHRLTRVETT 118 Query: 120 TGANRFENRKMGLVWIGIPAKGLLLDSKKGQQLANECKNAEQIK 163 TGANRFENRKMGLVWIGIPAKGLLLDSKKGQQLANECKNA+QIK Sbjct: 119 TGANRFENRKMGLVWIGIPAKGLLLDSKKGQQLANECKNADQIK 162 >ref|YP_004752396.1| hypothetical protein CFU_1741 [Collimonas fungivorans Ter331] gb|AEK61573.1| conserved hypothetical protein [Collimonas fungivorans Ter331] Length = 199 Score = 139 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 82/169 (48%), Positives = 103/169 (60%), Gaps = 15/169 (8%) Query: 1 MKKYLTALTLASALCAIGMPSAFAETGAPAATATKKQPAKKKAAHPKAAAAAAKPAEKMA 60 M+K L+ L L A A+ P A+T A + KAA + Sbjct: 39 MRKSLSILVLLCAGLAVAAPQVQAQTSAKKTVKKSAKKPAAKAAPAEV------------ 86 Query: 61 LSSDADDDENEPEIGGTKSADFQCEMGHKLTIWKNEADDKHIAIRWDKRIHRLTRVETTT 120 D +DE P++ + S D++CE+G+ LTI+ N DDKHIA+RW K +HRL+RV TTT Sbjct: 87 ---DDGEDEGTPDVKTSVSIDYKCELGNSLTIFTNAEDDKHIALRWGKALHRLSRVPTTT 143 Query: 121 GANRFENRKMGLVWIGIPAKGLLLDSKKGQQLANECKNAEQIKAAEAAP 169 GANRFENRK GL+WIGIPAKG+LLDSK G QLANECK+AEQ AAP Sbjct: 144 GANRFENRKYGLLWIGIPAKGILLDSKTGHQLANECKSAEQELLPAAAP 192 >ref|YP_001353192.1| hypothetical protein mma_1502 [Janthinobacterium sp. Marseille] gb|ABR88993.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 165 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 84/169 (49%), Positives = 106/169 (62%), Gaps = 8/169 (4%) Query: 1 MKKYLTALTLASALCAIGMPSAFAETGAPAATA-TKKQPAKKKAAHPKAAAAAAKPAEKM 59 MKK L A L IGM SA A A + + K+PA K A AAAA Sbjct: 1 MKKLLCAFLL------IGMSSAIAPAFAQSTSKEAAKKPATKTVKKAPAKAAAAATPAAA 54 Query: 60 ALSSDAD-DDENEPEIGGTKSADFQCEMGHKLTIWKNEADDKHIAIRWDKRIHRLTRVET 118 A + D D +D E I G+ + CE+G+K+T + N DDK++AIRW ++HRL R+ T Sbjct: 55 AAAGDDDQEDLGEANIEGSTVTHYNCELGNKITTYNNVGDDKYMAIRWQNKVHRLGRIGT 114 Query: 119 TTGANRFENRKMGLVWIGIPAKGLLLDSKKGQQLANECKNAEQIKAAEA 167 +TGANRFENRK GLVWI IP+K +LLDSKKGQQLANEC+N +Q+KA A Sbjct: 115 STGANRFENRKAGLVWINIPSKAMLLDSKKGQQLANECRNPDQVKAQAA 163 >ref|YP_001100063.1| putative signal peptide protein [Herminiimonas arsenicoxydans] emb|CAL61938.1| conserved hypothetical protein, putative exported protein [Herminiimonas arsenicoxydans] Length = 170 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 60/104 (57%), Positives = 79/104 (75%) Query: 64 DADDDENEPEIGGTKSADFQCEMGHKLTIWKNEADDKHIAIRWDKRIHRLTRVETTTGAN 123 D D+D E I G+ +F CE+G+K+T + N +DDKH+AIRW ++HR+ R+ T+TGAN Sbjct: 63 DDDEDLGEANIEGSIVNNFNCELGNKITTYYNASDDKHLAIRWKDKVHRMRRIGTSTGAN 122 Query: 124 RFENRKMGLVWIGIPAKGLLLDSKKGQQLANECKNAEQIKAAEA 167 RFENRK+GLVWI IP+K +LLDS KG QLANEC++ EQ KA A Sbjct: 123 RFENRKVGLVWIHIPSKAMLLDSGKGLQLANECRDPEQAKAFAA 166 >ref|ZP_08273488.1| putative signal peptide protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF33029.1| putative signal peptide protein [Oxalobacteraceae bacterium IMCC9480] Length = 171 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 84/173 (48%), Positives = 111/173 (64%), Gaps = 12/173 (6%) Query: 1 MKKYLTALT---LASALCAIGMPSAFA--ETGAPAATATKKQPAKKKAAHPKAAAAAAKP 55 M K +AL L S L A+ P+ FA ETGAPA K+ KKK+ AA A P Sbjct: 1 MTKLFSALLTGLLVSGL-ALTAPAVFAATETGAPAV----KKVIKKKSP--AKHAAPAAP 53 Query: 56 AEKMALSSDADDDENEPEIGGTKSADFQCEMGHKLTIWKNEADDKHIAIRWDKRIHRLTR 115 A + D DD + + +++CE+G+ LTI++N+ DD +IA+RW K + R+ R Sbjct: 54 AAYELAAPDDDDTGAPIDASIAPATEYKCELGNTLTIFRNDGDDNYIALRWHKVLTRMKR 113 Query: 116 VETTTGANRFENRKMGLVWIGIPAKGLLLDSKKGQQLANECKNAEQIKAAEAA 168 V TTTGA+RFEN++ GLVWIGIPAKGLLLDS+KGQQLANECK+ Q+ A A+ Sbjct: 114 VATTTGAHRFENKRSGLVWIGIPAKGLLLDSRKGQQLANECKDPTQMALATAS 166