BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3491.p (339 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776373.1| citrate lyase beta subunit [Herbaspirillum s... 563 e-158 ref|YP_001353193.1| citrate lyase beta chain [Janthinobacterium ... 426 e-117 ref|YP_001100062.1| putative lyase [Herminiimonas arsenicoxydans... 424 e-117 ref|YP_004752397.1| citrate lyase subunit beta [Collimonas fungi... 424 e-117 ref|ZP_08273489.1| Citrate lyase beta chain [Oxalobacteraceae ba... 420 e-115 >ref|YP_003776373.1| citrate lyase beta subunit [Herbaspirillum seropedicae SmR1] gb|ADJ64465.1| citrate lyase beta subunit protein [Herbaspirillum seropedicae SmR1] Length = 333 Score = 563 bits (1452), Expect = e-158, Method: Composition-based stats. Identities = 299/330 (90%), Positives = 308/330 (93%) Query: 1 MHPSQVLFPGAQQPVSLPVCDHYAGSEKLMRKSMALQQELGPLFDITFDCEDGAAAGNEA 60 MHPSQVLFPGAQQPV LPVCDHYAGSEKLMRKSMALQQELGPLFDITFDCEDGAAAGNE Sbjct: 1 MHPSQVLFPGAQQPVLLPVCDHYAGSEKLMRKSMALQQELGPLFDITFDCEDGAAAGNET 60 Query: 61 AHAELVASLITGPGNVHRRIGARLHDVGHAHFEQDVAIICGAAARELAYVMLPKPEGIED 120 AHAELVA+LITGP NVHRRIGARLHDV H HFEQDVAI+CGAAARELAYVMLPKPEGI+D Sbjct: 61 AHAELVAALITGPDNVHRRIGARLHDVSHPHFEQDVAILCGAAARELAYVMLPKPEGIDD 120 Query: 121 VLRALESINRAANAAGRAQLPVQVLIETHGALADAGKIAALPQVQSLSFGVMDFVSAHYG 180 VLRALESI RAA AAGR+ LPVQVL+ETHGALADA KIAALPQVQSLSFGVMDFVSAHYG Sbjct: 121 VLRALESIQRAARAAGRSDLPVQVLVETHGALADAWKIAALPQVQSLSFGVMDFVSAHYG 180 Query: 181 AIPGSAMRSPGQFDHPLVRRAKLEIAAACHAHGKVPSHNVTTDIKNPAAVADDARRAAQE 240 AIPGSAMRSPGQFDHPLVRRAKL+I+AACHAHGKVPSHNVTTDIKNPAAVADDA RAAQE Sbjct: 181 AIPGSAMRSPGQFDHPLVRRAKLDISAACHAHGKVPSHNVTTDIKNPAAVADDACRAAQE 240 Query: 241 FGYTRMWSIHPDQIRPIVQALSPATEEADLAAQILLKAQAVQWGPIQHGGTLHDRASYRY 300 FGYTRMWSIHPDQIRPIVQA+SPATEEADLAAQILLKAQAVQWGPIQH G LHDRASYRY Sbjct: 241 FGYTRMWSIHPDQIRPIVQAMSPATEEADLAAQILLKAQAVQWGPIQHLGNLHDRASYRY 300 Query: 301 YWSILQRAHAGGAALPAEVAAWFAETGTTA 330 YWSILQRAHA G LP E A WFA T + Sbjct: 301 YWSILQRAHATGVTLPPETAVWFAPGDTPS 330 >ref|YP_001353193.1| citrate lyase beta chain [Janthinobacterium sp. Marseille] gb|ABR89037.1| citrate lyase beta chain [Janthinobacterium sp. Marseille] Length = 323 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 218/317 (68%), Positives = 254/317 (80%) Query: 1 MHPSQVLFPGAQQPVSLPVCDHYAGSEKLMRKSMALQQELGPLFDITFDCEDGAAAGNEA 60 MHPS+VLF G PVS+P CDHYAGSEKLMRKS+ALQQELGP+FDITFDCEDGAA GNE Sbjct: 1 MHPSEVLFQGKCPPVSIPACDHYAGSEKLMRKSLALQQELGPVFDITFDCEDGAAHGNEK 60 Query: 61 AHAELVASLITGPGNVHRRIGARLHDVGHAHFEQDVAIICGAAARELAYVMLPKPEGIED 120 HA L+ +L+ G N RIGAR+HDV FEQD+ II AA++LAY+++PK + + D Sbjct: 61 DHAHLLGTLVAGEENQFARIGARVHDVTSEFFEQDIEIILQHAAQKLAYLVVPKVDSLAD 120 Query: 121 VLRALESINRAANAAGRAQLPVQVLIETHGALADAGKIAALPQVQSLSFGVMDFVSAHYG 180 + A+ +NR A+ GR QLPV VLIETHGALAD IAALPQV+ LSFGVMDFVSAHYG Sbjct: 121 TVNAIALVNRHAHKQGREQLPVHVLIETHGALADVFAIAALPQVECLSFGVMDFVSAHYG 180 Query: 181 AIPGSAMRSPGQFDHPLVRRAKLEIAAACHAHGKVPSHNVTTDIKNPAAVADDARRAAQE 240 AIPG+AMRSPGQF HPLV RAKLEIAAACHAHGK PSHNVTT+I + + VA DA RAA E Sbjct: 181 AIPGNAMRSPGQFTHPLVARAKLEIAAACHAHGKTPSHNVTTEINDTSVVASDAHRAAAE 240 Query: 241 FGYTRMWSIHPDQIRPIVQALSPATEEADLAAQILLKAQAVQWGPIQHGGTLHDRASYRY 300 FGYTRMWSIHP+QI+PI+++ +P E + AA+IL +A A+QWGPIQH G LHDRASYRY Sbjct: 241 FGYTRMWSIHPNQIKPILKSFAPRLSEVNEAAEILAQAHAIQWGPIQHNGKLHDRASYRY 300 Query: 301 YWSILQRAHAGGAALPA 317 YW+ILQRA A G LPA Sbjct: 301 YWTILQRAQASGLTLPA 317 >ref|YP_001100062.1| putative lyase [Herminiimonas arsenicoxydans] emb|CAL61937.1| putative lyase, CitE-like [Herminiimonas arsenicoxydans] Length = 321 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 221/316 (69%), Positives = 251/316 (79%), Gaps = 2/316 (0%) Query: 1 MHPSQVLFPGAQQPVSLPVCDHYAGSEKLMRKSMALQQELGPLFDITFDCEDGAAAGNEA 60 MHPS+VLF G PVS+PVCDHYAGSEKLMRKS+ALQ ELGP+FDITFDCEDGAA GNE Sbjct: 1 MHPSEVLFQGTLPPVSIPVCDHYAGSEKLMRKSLALQAELGPVFDITFDCEDGAALGNEQ 60 Query: 61 AHAELVASLITGPGNVHRRIGARLHDVGHAHFEQDVAIICGAAARELAYVMLPKPEGIED 120 AHA+L+ +LI G N+ RIGAR+HDV FEQD+ II AA LAY+++PK I D Sbjct: 61 AHAQLIGALIAGEENLFGRIGARVHDVTSEFFEQDIKIILQHAAERLAYLVMPKVGSIAD 120 Query: 121 VLRALESINRAANAAGRAQLPVQVLIETHGALADAGKIAALPQVQSLSFGVMDFVSAHYG 180 V A+ INR AN GRA LPV VLIETHGAL DA IAALPQV+ LSFG+MDFVS+HYG Sbjct: 121 VENAISLINRHAN--GRANLPVHVLIETHGALKDAYAIAALPQVECLSFGIMDFVSSHYG 178 Query: 181 AIPGSAMRSPGQFDHPLVRRAKLEIAAACHAHGKVPSHNVTTDIKNPAAVADDARRAAQE 240 AIPGSAMRSPGQF HPL+ RAKLEIAAACHAHGK PSHNVTT+I + + VA DA RAA E Sbjct: 179 AIPGSAMRSPGQFTHPLLTRAKLEIAAACHAHGKTPSHNVTTEIHDTSVVASDAHRAASE 238 Query: 241 FGYTRMWSIHPDQIRPIVQALSPATEEADLAAQILLKAQAVQWGPIQHGGTLHDRASYRY 300 F YTRMWSIHP QI+PI+++ +P E + AA IL +AQAVQWGPIQH G LHD+ASYRY Sbjct: 239 FAYTRMWSIHPGQIKPILKSFAPRLSEVNEAATILSQAQAVQWGPIQHNGKLHDKASYRY 298 Query: 301 YWSILQRAHAGGAALP 316 YW+ILQRA A G LP Sbjct: 299 YWTILQRAQASGLPLP 314 >ref|YP_004752397.1| citrate lyase subunit beta [Collimonas fungivorans Ter331] gb|AEK61574.1| Citrate lyase beta chain [Collimonas fungivorans Ter331] Length = 323 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 234/320 (73%), Positives = 257/320 (80%) Query: 1 MHPSQVLFPGAQQPVSLPVCDHYAGSEKLMRKSMALQQELGPLFDITFDCEDGAAAGNEA 60 MHP+QVLF G QQPVSLPVCDHYAG+EKLMRKS+ALQQELGP+FDIT DCEDGA+AGNEA Sbjct: 1 MHPTQVLFLGKQQPVSLPVCDHYAGAEKLMRKSVALQQELGPVFDITLDCEDGASAGNEA 60 Query: 61 AHAELVASLITGPGNVHRRIGARLHDVGHAHFEQDVAIICGAAARELAYVMLPKPEGIED 120 AHA+LVA++I G N RIGAR+HD G A FEQDV IIC AAR LAY+MLPK E + + Sbjct: 61 AHAQLVAAVIGGADNRFERIGARVHDSGSAFFEQDVEIICKGAARRLAYLMLPKAESLAE 120 Query: 121 VLRALESINRAANAAGRAQLPVQVLIETHGALADAGKIAALPQVQSLSFGVMDFVSAHYG 180 V A+ I ++ AGR LPV VLIETHGALAD IAALPQVQSLSFG+MDFVSAHYG Sbjct: 121 VSAAIALIEHHSSQAGRQALPVHVLIETHGALADVFAIAALPQVQSLSFGIMDFVSAHYG 180 Query: 181 AIPGSAMRSPGQFDHPLVRRAKLEIAAACHAHGKVPSHNVTTDIKNPAAVADDARRAAQE 240 AIP +AMRSP QF HPLV RAKLEIAAACHAHGKVPSHNVTTDIK+ A+VA DA RA E Sbjct: 181 AIPSAAMRSPAQFSHPLVTRAKLEIAAACHAHGKVPSHNVTTDIKDSASVAADAGRAVSE 240 Query: 241 FGYTRMWSIHPDQIRPIVQALSPATEEADLAAQILLKAQAVQWGPIQHGGTLHDRASYRY 300 FGYTRMWSIHP QIRPI+ A +P E AAQILL A+ WGPIQH GTLHDRASYRY Sbjct: 241 FGYTRMWSIHPQQIRPILNAFTPPQSEIAAAAQILLAARQADWGPIQHEGTLHDRASYRY 300 Query: 301 YWSILQRAHAGGAALPAEVA 320 YWS+LQRA G ALP A Sbjct: 301 YWSVLQRAKNNGVALPEGAA 320 >ref|ZP_08273489.1| Citrate lyase beta chain [Oxalobacteraceae bacterium IMCC9480] gb|EGF33030.1| Citrate lyase beta chain [Oxalobacteraceae bacterium IMCC9480] Length = 325 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 221/320 (69%), Positives = 253/320 (79%) Query: 1 MHPSQVLFPGAQQPVSLPVCDHYAGSEKLMRKSMALQQELGPLFDITFDCEDGAAAGNEA 60 MHPS+VLF G + PVSLPVCDHYAGS+KLMRKS+ALQQELGP+FDITFDCEDGAAAG+E Sbjct: 1 MHPSEVLFQGKRPPVSLPVCDHYAGSDKLMRKSIALQQELGPVFDITFDCEDGAAAGDEQ 60 Query: 61 AHAELVASLITGPGNVHRRIGARLHDVGHAHFEQDVAIICGAAARELAYVMLPKPEGIED 120 AHAE VA+LI N RIGAR+HDV F QDVAIIC AAR+LAY+++PK + + + Sbjct: 61 AHAERVAALIASDANQFGRIGARVHDVHSEFFAQDVAIICHGAARQLAYLVIPKVDSVAE 120 Query: 121 VLRALESINRAANAAGRAQLPVQVLIETHGALADAGKIAALPQVQSLSFGVMDFVSAHYG 180 V+ A++ IN A AGR LP+ VLIETHGALAD IAAL QVQ LSFG+MDFVSAHYG Sbjct: 121 VIAAIDLINHHARHAGREALPIHVLIETHGALADVFAIAALDQVQCLSFGIMDFVSAHYG 180 Query: 181 AIPGSAMRSPGQFDHPLVRRAKLEIAAACHAHGKVPSHNVTTDIKNPAAVADDARRAAQE 240 AIP SAMR+PGQF HPLV RAKL I+AACHAHGKVPSHNVTTDIK+ A+DA RA + Sbjct: 181 AIPASAMRTPGQFTHPLVMRAKLAISAACHAHGKVPSHNVTTDIKDSGIAANDASRAGSD 240 Query: 241 FGYTRMWSIHPDQIRPIVQALSPATEEADLAAQILLKAQAVQWGPIQHGGTLHDRASYRY 300 GYTRMWSIHPDQI+PIV++ P + E AAQIL AQA WGPI+H G LHDRASYRY Sbjct: 241 CGYTRMWSIHPDQIKPIVKSFMPRSSEVAEAAQILTDAQAASWGPIKHNGRLHDRASYRY 300 Query: 301 YWSILQRAHAGGAALPAEVA 320 YW+ILQRA + G LP VA Sbjct: 301 YWTILQRARSSGLPLPDSVA 320