BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3490.p (329 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776372.1| malate dehydrogenase [Herbaspirillum seroped... 634 e-180 ref|YP_004752398.1| malate dehydrogenase [Collimonas fungivorans... 608 e-172 ref|ZP_08273490.1| Malate dehydrogenase [Oxalobacteraceae bacter... 597 e-168 ref|YP_001353194.1| malate dehydrogenase [Janthinobacterium sp. ... 592 e-167 ref|YP_001100061.1| malate dehydrogenase [Herminiimonas arsenico... 586 e-165 >ref|YP_003776372.1| malate dehydrogenase [Herbaspirillum seropedicae SmR1] emb|CAM32701.1| Malate dehydrogenase protein [Herbaspirillum seropedicae] gb|ADJ64464.1| malate dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 329 Score = 634 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 327/329 (99%), Positives = 328/329 (99%) Query: 1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALKGVIMEI 60 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALKGVIMEI Sbjct: 1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALKGVIMEI 60 Query: 61 DDCAFPLLAGVTAHSDPMTAFKDADIALLVGARPRGPGMERKDLLEANAQIFTVQGKALD 120 DDCAFPLLAGVTAHSDPMTAFKDADIALLVGARPRGPGMERKDLLEANAQIFTVQGKALD Sbjct: 61 DDCAFPLLAGVTAHSDPMTAFKDADIALLVGARPRGPGMERKDLLEANAQIFTVQGKALD 120 Query: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQVAAKIGKPVSA 180 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQVAAKIGKPVSA Sbjct: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQVAAKIGKPVSA 180 Query: 181 IEKLCVWGNHSPTMYADYRFATADGASVKDTINDQEWNKNVFLPTVGKRGAAIIEARGLS 240 IEKLCVWGNHSPTMYADYRFATADG SVKDTINDQEWNKNVFLPTVGKRGAAIIEARGLS Sbjct: 181 IEKLCVWGNHSPTMYADYRFATADGVSVKDTINDQEWNKNVFLPTVGKRGAAIIEARGLS 240 Query: 241 SAASAANAAIDHVRDWVLGTNGKWTTMGIPSDGSYGIPEGTMFGFPVTTENGEYKIVQGL 300 SAASAANAAIDHVRDWVLGTNGKWTTMGIPSDGSYGIPEGTMFGFPVTTENGEYKIVQGL Sbjct: 241 SAASAANAAIDHVRDWVLGTNGKWTTMGIPSDGSYGIPEGTMFGFPVTTENGEYKIVQGL 300 Query: 301 EIDEFSQERINITLKELLEEREGVKHLVG 329 EIDEFSQERINITLKEL+EEREGVKHLVG Sbjct: 301 EIDEFSQERINITLKELMEEREGVKHLVG 329 >ref|YP_004752398.1| malate dehydrogenase [Collimonas fungivorans Ter331] gb|AEK61575.1| Malate dehydrogenase [Collimonas fungivorans Ter331] Length = 329 Score = 608 bits (1567), Expect = e-172, Method: Composition-based stats. Identities = 311/329 (94%), Positives = 323/329 (98%) Query: 1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALKGVIMEI 60 MAK+P+RVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALKGVIME+ Sbjct: 1 MAKSPLRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALKGVIMEV 60 Query: 61 DDCAFPLLAGVTAHSDPMTAFKDADIALLVGARPRGPGMERKDLLEANAQIFTVQGKALD 120 DDCAFPLLAG+TAHSDP+TAFKD D+ALLVGARPRGPGMERKDLLEANAQIFTVQGKALD Sbjct: 61 DDCAFPLLAGITAHSDPLTAFKDVDVALLVGARPRGPGMERKDLLEANAQIFTVQGKALD 120 Query: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQVAAKIGKPVSA 180 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQVAAKIGKPV++ Sbjct: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQVAAKIGKPVAS 180 Query: 181 IEKLCVWGNHSPTMYADYRFATADGASVKDTINDQEWNKNVFLPTVGKRGAAIIEARGLS 240 IEKL VWGNHSPTMYADYR+ATADGASVKD INDQ WNK+VFLPTVGKRGAAIIEARGLS Sbjct: 181 IEKLFVWGNHSPTMYADYRYATADGASVKDLINDQVWNKDVFLPTVGKRGAAIIEARGLS 240 Query: 241 SAASAANAAIDHVRDWVLGTNGKWTTMGIPSDGSYGIPEGTMFGFPVTTENGEYKIVQGL 300 SAASAANAAIDHVRDWVLGTNGKWTTMG+PSDGSYGIPEGTMFGFPVTTENGEYKIVQGL Sbjct: 241 SAASAANAAIDHVRDWVLGTNGKWTTMGVPSDGSYGIPEGTMFGFPVTTENGEYKIVQGL 300 Query: 301 EIDEFSQERINITLKELLEEREGVKHLVG 329 EID FSQERINITLKEL EER+GVKHLVG Sbjct: 301 EIDAFSQERINITLKELQEERDGVKHLVG 329 >ref|ZP_08273490.1| Malate dehydrogenase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33031.1| Malate dehydrogenase [Oxalobacteraceae bacterium IMCC9480] Length = 375 Score = 597 bits (1538), Expect = e-168, Method: Composition-based stats. Identities = 301/329 (91%), Positives = 313/329 (95%) Query: 1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALKGVIMEI 60 MAKAPMRVAVTGAAGQIGYSLLFRIANGD+LGKDQPVILQLLEIPDEKAQKALKGV+MEI Sbjct: 47 MAKAPMRVAVTGAAGQIGYSLLFRIANGDMLGKDQPVILQLLEIPDEKAQKALKGVMMEI 106 Query: 61 DDCAFPLLAGVTAHSDPMTAFKDADIALLVGARPRGPGMERKDLLEANAQIFTVQGKALD 120 DDCAFPLLAG++AHSDPMTAFKD D+ALLVGARPRGPGMERKDLLEANAQIFTVQGKALD Sbjct: 107 DDCAFPLLAGMSAHSDPMTAFKDIDVALLVGARPRGPGMERKDLLEANAQIFTVQGKALD 166 Query: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQVAAKIGKPVSA 180 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQ+AAK GKPV++ Sbjct: 167 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQIAAKTGKPVAS 226 Query: 181 IEKLCVWGNHSPTMYADYRFATADGASVKDTINDQEWNKNVFLPTVGKRGAAIIEARGLS 240 IEKLCVWGNHSPTMYADYRFAT DG SVKD IND WNK+ FLPTVGKRG AIIEARGLS Sbjct: 227 IEKLCVWGNHSPTMYADYRFATIDGQSVKDMINDAAWNKDTFLPTVGKRGGAIIEARGLS 286 Query: 241 SAASAANAAIDHVRDWVLGTNGKWTTMGIPSDGSYGIPEGTMFGFPVTTENGEYKIVQGL 300 SAASAANAAIDHV DWVLGT GKWTTMGI SDGSY IPEGT+FGFPVTTENGEYKIV GL Sbjct: 287 SAASAANAAIDHVHDWVLGTGGKWTTMGIASDGSYDIPEGTIFGFPVTTENGEYKIVAGL 346 Query: 301 EIDEFSQERINITLKELLEEREGVKHLVG 329 IDEFS+ERIN+TL ELLEEREGVKHLVG Sbjct: 347 AIDEFSRERINVTLNELLEEREGVKHLVG 375 >ref|YP_001353194.1| malate dehydrogenase [Janthinobacterium sp. Marseille] sp|A6SY47|MDH_JANMA RecName: Full=Malate dehydrogenase gb|ABR88530.1| malate dehydrogenase [Janthinobacterium sp. Marseille] Length = 329 Score = 592 bits (1525), Expect = e-167, Method: Composition-based stats. Identities = 305/329 (92%), Positives = 318/329 (96%) Query: 1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALKGVIMEI 60 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEI DEKAQKALKGVIMEI Sbjct: 1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIADEKAQKALKGVIMEI 60 Query: 61 DDCAFPLLAGVTAHSDPMTAFKDADIALLVGARPRGPGMERKDLLEANAQIFTVQGKALD 120 DDCAFPLLAGVTAHSDPMTAFKDAD+ALLVGARPRGPGMERKDLLEANAQIFTVQGKALD Sbjct: 61 DDCAFPLLAGVTAHSDPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKALD 120 Query: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQVAAKIGKPVSA 180 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQ+AAKI KPV++ Sbjct: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQIAAKISKPVTS 180 Query: 181 IEKLCVWGNHSPTMYADYRFATADGASVKDTINDQEWNKNVFLPTVGKRGAAIIEARGLS 240 IEKL VWGNHSPTMY DYRFATADG SVK+ IND+ WNK+VFLPTVGKRGAAII+ARG+S Sbjct: 181 IEKLTVWGNHSPTMYPDYRFATADGKSVKEAINDEVWNKDVFLPTVGKRGAAIIDARGVS 240 Query: 241 SAASAANAAIDHVRDWVLGTNGKWTTMGIPSDGSYGIPEGTMFGFPVTTENGEYKIVQGL 300 SAASAANAAIDHVRDWVLGTNGKW TMGIPSDGSYGIP+ T+FGFPVT ENGEYKIVQGL Sbjct: 241 SAASAANAAIDHVRDWVLGTNGKWVTMGIPSDGSYGIPKDTIFGFPVTVENGEYKIVQGL 300 Query: 301 EIDEFSQERINITLKELLEEREGVKHLVG 329 EID FSQERIN+TLKELLEEREGVKHL+G Sbjct: 301 EIDAFSQERINLTLKELLEEREGVKHLLG 329 >ref|YP_001100061.1| malate dehydrogenase [Herminiimonas arsenicoxydans] sp|A4G5Z9|MDH_HERAR RecName: Full=Malate dehydrogenase emb|CAL61936.1| malate dehydrogenase [Herminiimonas arsenicoxydans] Length = 329 Score = 586 bits (1510), Expect = e-165, Method: Composition-based stats. Identities = 303/329 (92%), Positives = 314/329 (95%) Query: 1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALKGVIMEI 60 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEI +EKAQ ALKGVIMEI Sbjct: 1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIDNEKAQNALKGVIMEI 60 Query: 61 DDCAFPLLAGVTAHSDPMTAFKDADIALLVGARPRGPGMERKDLLEANAQIFTVQGKALD 120 DDCAFPLLAGV+AHSDPMTAFKD DIALLVGARPRGPGMERKDLLEANAQIFTVQGKALD Sbjct: 61 DDCAFPLLAGVSAHSDPMTAFKDVDIALLVGARPRGPGMERKDLLEANAQIFTVQGKALD 120 Query: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQVAAKIGKPVSA 180 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQ+AAK GKPV+A Sbjct: 121 AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQIAAKTGKPVTA 180 Query: 181 IEKLCVWGNHSPTMYADYRFATADGASVKDTINDQEWNKNVFLPTVGKRGAAIIEARGLS 240 IEKL VWGNHSPTMY DYRFAT DG SVK+ IND+ WNK+VFLPTVGKRGAAIIEARG+S Sbjct: 181 IEKLTVWGNHSPTMYPDYRFATIDGKSVKEAINDEVWNKDVFLPTVGKRGAAIIEARGVS 240 Query: 241 SAASAANAAIDHVRDWVLGTNGKWTTMGIPSDGSYGIPEGTMFGFPVTTENGEYKIVQGL 300 SAASAANAAIDHVRDWVLGTNGKW TMGIPSDGSYGIP+ TMFGFPVTTENGEYKIVQGL Sbjct: 241 SAASAANAAIDHVRDWVLGTNGKWVTMGIPSDGSYGIPKDTMFGFPVTTENGEYKIVQGL 300 Query: 301 EIDEFSQERINITLKELLEEREGVKHLVG 329 EID FSQERIN+TLKEL EEREGVKHL+ Sbjct: 301 EIDAFSQERINLTLKELSEEREGVKHLLA 329