BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3488.p (261 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776371.1| GntR family transcription regulator protein ... 508 e-142 ref|YP_004752400.1| transcriptional regulator [Collimonas fungiv... 362 2e-98 ref|YP_001353195.1| GntR family transcriptional regulator [Janth... 362 4e-98 ref|YP_001100060.1| GntR family transcriptional regulator [Hermi... 360 1e-97 ref|ZP_08273491.1| Transcriptional regulator, GntR family [Oxalo... 348 4e-94 >ref|YP_003776371.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64463.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 334 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 257/261 (98%), Positives = 258/261 (98%) Query: 1 MSSILPNSNNVDAQAAGAGVASPAPTFSPLYQQIKALIMQRLEAGEWKPGELIPSEVELG 60 MSSILPNSNN DA AAGAGVASPAPTFSPLYQQIKALIMQRLEAGEWKPGELIPSEVELG Sbjct: 74 MSSILPNSNNADAHAAGAGVASPAPTFSPLYQQIKALIMQRLEAGEWKPGELIPSEVELG 133 Query: 61 SRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSDEPQRPEN 120 SRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSDEPQRPEN Sbjct: 134 SRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSDEPQRPEN 193 Query: 121 KIIEVKRVRASAEVARQLDMKSGDSVIFIRRVKSFNGTPIILEDIWLPGAIFKGLTAERL 180 KIIEVKRVRASAEVARQLDMKSGDSVIFIRRVKSFNG PIILEDIWLPGAIFKGLTAERL Sbjct: 194 KIIEVKRVRASAEVARQLDMKSGDSVIFIRRVKSFNGVPIILEDIWLPGAIFKGLTAERL 253 Query: 181 MEYRGPLYGLFESEFGTRMIRAEERIRAVGADPDAAEFLGVTPQTPLLSVERASFTYGDK 240 +EYRGPLYGLFESEFGTRMIRAEERIRAVGADPDAAEFLGVTPQTPLLSVERASFTYGDK Sbjct: 254 VEYRGPLYGLFESEFGTRMIRAEERIRAVGADPDAAEFLGVTPQTPLLSVERASFTYGDK 313 Query: 241 PVEMRRGLYLTTNHHYQSELS 261 PVEMRRGLYLTTNHHYQSELS Sbjct: 314 PVEMRRGLYLTTNHHYQSELS 334 >ref|YP_004752400.1| transcriptional regulator [Collimonas fungivorans Ter331] gb|AEK61577.1| Transcriptional regulator [Collimonas fungivorans Ter331] Length = 307 Score = 362 bits (930), Expect = 2e-98, Method: Composition-based stats. Identities = 188/264 (71%), Positives = 224/264 (84%), Gaps = 3/264 (1%) Query: 1 MSSILPNSNNVDAQAAGAGVASPA---PTFSPLYQQIKALIMQRLEAGEWKPGELIPSEV 57 MSSI N ++ A + A ASP+ PTFSPLYQQIKALIMQRL++GEWKPGELIPSEV Sbjct: 44 MSSIPSNVSSDPAGQSAAVPASPSASSPTFSPLYQQIKALIMQRLQSGEWKPGELIPSEV 103 Query: 58 ELGSRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSDEPQR 117 ELG+RFKVSQGTVRKAIDELAAENL+VRRQGKGTFVATHHE ++QFRFLRLM DSD+PQ Sbjct: 104 ELGNRFKVSQGTVRKAIDELAAENLLVRRQGKGTFVATHHEARSQFRFLRLMPDSDQPQV 163 Query: 118 PENKIIEVKRVRASAEVARQLDMKSGDSVIFIRRVKSFNGTPIILEDIWLPGAIFKGLTA 177 + K+IE+KR+RA AE+AR L MKSGDS ++++RV +F+G P ILE++WLPGA+FK LT Sbjct: 164 TDKKVIELKRLRAPAEIARLLGMKSGDSAVYVKRVMAFDGVPTILEELWLPGALFKALTL 223 Query: 178 ERLMEYRGPLYGLFESEFGTRMIRAEERIRAVGADPDAAEFLGVTPQTPLLSVERASFTY 237 ERL+EY+GP+YGLFE+EFGTRMIRA E+IRA AD DAA+ L V +PLL VER SFTY Sbjct: 224 ERLVEYKGPMYGLFETEFGTRMIRATEQIRAASADADAAQLLAVEKSSPLLCVERVSFTY 283 Query: 238 GDKPVEMRRGLYLTTNHHYQSELS 261 GDKPVE+RRGLY+T HHYQ+EL+ Sbjct: 284 GDKPVEVRRGLYVTNRHHYQNELN 307 >ref|YP_001353195.1| GntR family transcriptional regulator [Janthinobacterium sp. Marseille] gb|ABR89228.1| transcriptional regulator, GntR family [Janthinobacterium sp. Marseille] Length = 284 Score = 362 bits (928), Expect = 4e-98, Method: Composition-based stats. Identities = 174/259 (67%), Positives = 215/259 (83%), Gaps = 4/259 (1%) Query: 3 SILPNSNNVDAQAAGAGVASPAPTFSPLYQQIKALIMQRLEAGEWKPGELIPSEVELGSR 62 + LPN+N A AG A+P+PTFSPLYQQIKALI + L++GEW+PGELIPSEVEL +R Sbjct: 30 TTLPNNN----AAGSAGGATPSPTFSPLYQQIKALITRSLQSGEWRPGELIPSEVELATR 85 Query: 63 FKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSDEPQRPENKI 122 FKVSQGTVRKAIDEL+AENLVVRRQGKGTFVATHHE +AQFRFLRL D EP P+N I Sbjct: 86 FKVSQGTVRKAIDELSAENLVVRRQGKGTFVATHHEARAQFRFLRLKPDVGEPLYPDNTI 145 Query: 123 IEVKRVRASAEVARQLDMKSGDSVIFIRRVKSFNGTPIILEDIWLPGAIFKGLTAERLME 182 I+ KR+RA A++ARQLD+K+GDSV+F++RV+SF+G P ILE++WLPG IFKGL+ ER+++ Sbjct: 146 IDAKRLRAPADIARQLDIKTGDSVVFLKRVQSFDGAPTILEELWLPGTIFKGLSVERVLQ 205 Query: 183 YRGPLYGLFESEFGTRMIRAEERIRAVGADPDAAEFLGVTPQTPLLSVERASFTYGDKPV 242 Y+GP+Y L E+EFGT+MIRA E I+AV AD A+ L + TPLLSV R SFTYGDKPV Sbjct: 206 YKGPMYALLETEFGTQMIRAVENIKAVVADQVTADLLSLPLNTPLLSVTRVSFTYGDKPV 265 Query: 243 EMRRGLYLTTNHHYQSELS 261 E+RR Y+T NHHY++EL+ Sbjct: 266 EVRRSYYVTNNHHYRNELN 284 >ref|YP_001100060.1| GntR family transcriptional regulator [Herminiimonas arsenicoxydans] emb|CAL61935.1| Transcriptional regulator, GntR family [Herminiimonas arsenicoxydans] Length = 312 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 176/262 (67%), Positives = 216/262 (82%), Gaps = 1/262 (0%) Query: 1 MSSILPNSNNVD-AQAAGAGVASPAPTFSPLYQQIKALIMQRLEAGEWKPGELIPSEVEL 59 MSS P+ + + AQAAGA P+PTFSPLYQQIKALI + L++GEW+PGELIPSE+EL Sbjct: 51 MSSSHPSLSIANPAQAAGASATVPSPTFSPLYQQIKALITKSLQSGEWRPGELIPSEIEL 110 Query: 60 GSRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSDEPQRPE 119 +RFKVSQGTVRKAIDEL+AENLVVRRQGKGTFVATHHE +AQFRFLRL D + Q PE Sbjct: 111 ANRFKVSQGTVRKAIDELSAENLVVRRQGKGTFVATHHEARAQFRFLRLKPDVGDAQYPE 170 Query: 120 NKIIEVKRVRASAEVARQLDMKSGDSVIFIRRVKSFNGTPIILEDIWLPGAIFKGLTAER 179 N + E +R+RA A++ARQLD+K+GDSV F++R++SF+G P ILE++WLPG+IFKGL+ ER Sbjct: 171 NTVTEARRLRAPADIARQLDIKTGDSVFFVKRIQSFDGAPTILEELWLPGSIFKGLSLER 230 Query: 180 LMEYRGPLYGLFESEFGTRMIRAEERIRAVGADPDAAEFLGVTPQTPLLSVERASFTYGD 239 +++Y+GP+Y L E+EFG +MIRA E IRAV AD AAE L + TPLLSV R SFTYGD Sbjct: 231 VLQYKGPMYALLETEFGIQMIRAVENIRAVVADQSAAELLMLPLNTPLLSVNRVSFTYGD 290 Query: 240 KPVEMRRGLYLTTNHHYQSELS 261 K VE+RR LY+T NHHYQ+ELS Sbjct: 291 KAVEVRRSLYVTNNHHYQNELS 312 >ref|ZP_08273491.1| Transcriptional regulator, GntR family [Oxalobacteraceae bacterium IMCC9480] gb|EGF33032.1| Transcriptional regulator, GntR family [Oxalobacteraceae bacterium IMCC9480] Length = 258 Score = 348 bits (893), Expect = 4e-94, Method: Composition-based stats. Identities = 177/234 (75%), Positives = 199/234 (85%) Query: 27 FSPLYQQIKALIMQRLEAGEWKPGELIPSEVELGSRFKVSQGTVRKAIDELAAENLVVRR 86 FSPLYQQIKALI L+AGEWKPGELIPSEVEL RFKVSQGTVRKAIDEL++ENLVVRR Sbjct: 24 FSPLYQQIKALITASLQAGEWKPGELIPSEVELAGRFKVSQGTVRKAIDELSSENLVVRR 83 Query: 87 QGKGTFVATHHETQAQFRFLRLMADSDEPQRPENKIIEVKRVRASAEVARQLDMKSGDSV 146 QGKGTFVATHHE +AQFRFLRLM D+ + +N IIEVKR RA A+VAR LD+K D+V Sbjct: 84 QGKGTFVATHHEVRAQFRFLRLMPDAGVAHQADNLIIEVKRQRAPADVARLLDIKPADAV 143 Query: 147 IFIRRVKSFNGTPIILEDIWLPGAIFKGLTAERLMEYRGPLYGLFESEFGTRMIRAEERI 206 IFI+RV+SF G P ILE++WLPG IFKGLTAERL+EY+GP+YGLFE+EFGTRMIRA E+I Sbjct: 144 IFIKRVQSFEGAPAILEELWLPGTIFKGLTAERLVEYKGPMYGLFETEFGTRMIRATEKI 203 Query: 207 RAVGADPDAAEFLGVTPQTPLLSVERASFTYGDKPVEMRRGLYLTTNHHYQSEL 260 RAV AD A +L V TPLLSVER SFTYGDKPVE+RRGLY T +HHYQSEL Sbjct: 204 RAVHADHVACGWLQVVTDTPLLSVERVSFTYGDKPVEVRRGLYRTDSHHYQSEL 257