BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3478.p (315 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776361.1| hypothetical protein Hsero_2965 [Herbaspiril... 187 2e-45 emb|CAL61923.2| Conserved hypothetical protein [Herminiimonas ar... 71 2e-10 ref|YP_001100048.1| hypothetical protein HEAR1767 [Herminiimonas... 70 5e-10 ref|YP_004752413.1| hypothetical protein CFU_1758 [Collimonas fu... 67 4e-09 ref|YP_001353207.1| hypothetical protein mma_1517 [Janthinobacte... 66 6e-09 >ref|YP_003776361.1| hypothetical protein Hsero_2965 [Herbaspirillum seropedicae SmR1] gb|ADJ64453.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 294 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 187/289 (64%), Positives = 213/289 (73%), Gaps = 16/289 (5%) Query: 1 MNKKSMQGLFADVKGVTSSLCGLMLALAAGASMAQGQASASAMSGAQPGRIQAQAQGQVS 60 M K MQ FAD KGV+ SLC L+L LAAG AQ + A + A A + Sbjct: 1 MIKNDMQVFFADAKGVSVSLCALVLMLAAGGVAAQAPDTRQAAAPAGGAATAAAPAPVTA 60 Query: 61 PADAGATPQAAPVAPAPVMSRERFDELEARAPIAQRYPAGSIKSDEAAQKALDEAAEDRQ 120 M+RERF+++EAR PI QRYPAGSIKS E AQ LDE AEDRQ Sbjct: 61 AP----------------MTRERFEQIEARTPIRQRYPAGSIKSVEMAQAVLDEVAEDRQ 104 Query: 121 VAELRYILDQRACYPKFLVSDCLEAARDRKRLTDKGIKAVEYEAKVFQRQATVDDRDRSL 180 +LRY+LDQRAC PKFLV+ CLE ARDRKRL +K +K EYEA VFQRQA VDDRDRSL Sbjct: 105 AVQLRYVLDQRACAPKFLVNKCLEEARDRKRLAEKDLKQAEYEANVFQRQANVDDRDRSL 164 Query: 181 AEQRAKDEEDSARRLADQKQKEADSARKVQESRTKNSEVQQRIDQNKNVPADYRVRQHEA 240 A+QRAKD+ED+ARR A+QKQKEADSARKVQES KN EVQQRID NK+VPADYRVR+HEA Sbjct: 165 ADQRAKDQEDAARRQAEQKQKEADSARKVQESNAKNREVQQRIDANKDVPADYRVREHEA 224 Query: 241 EVQRQQAEEAARAPSRAANAAERQRRIQEAEEHRLEVERKKAENERERA 289 + ++Q+AE+AARAP RAANAAERQRRIQEAE+HRLEVER KAE ERERA Sbjct: 225 KQRQQRAEDAARAPERAANAAERQRRIQEAEQHRLEVERNKAEKERERA 273 >emb|CAL61923.2| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 237 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 114/202 (56%), Gaps = 9/202 (4%) Query: 93 IAQRYPAGSIKSDEAAQKALDEAAEDRQVAELRYILDQRACYPKFLVSDCLEAARDRKRL 152 + RYPAG+IK+ E A AL++ + R E R+ +Q ACYPKF + CL A++R+R+ Sbjct: 42 VVGRYPAGAIKTQETADSALEDVKQARANIEARFNAEQHACYPKFFATSCLNKAKERRRV 101 Query: 153 TDKGIKAVEYEAKVFQRQATVDDRDRSLAEQRAKDEEDSARRLADQKQKEADSARKVQES 212 +K +E EA + R A V +RDR L E+ A++E + + A + K D+ + + E Sbjct: 102 DLLTVKPIEVEANAYIRHARVVERDRRLTEKAAENEGKAILQQAPGEGKTDDAGKSIHEQ 161 Query: 213 RTKNSEVQQRIDQNKNVPADYRVRQHEAEVQRQQ---AEEAARAPSRAANAAERQRRIQE 269 + + + Q++ AD + +++E + ++QQ A EAA RAAN + +++E Sbjct: 162 NSVSRDAQRK------ARADAQAKKNEKQAEKQQSLKANEAAEEQKRAANIRRYEEKVKE 215 Query: 270 AEEHRLEVERKKAENERERAER 291 + + E+ KKAE E+ + ++ Sbjct: 216 SAARQKEILEKKAEKEKAQQQK 237 >ref|YP_001100048.1| hypothetical protein HEAR1767 [Herminiimonas arsenicoxydans] Length = 230 Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 114/202 (56%), Gaps = 9/202 (4%) Query: 93 IAQRYPAGSIKSDEAAQKALDEAAEDRQVAELRYILDQRACYPKFLVSDCLEAARDRKRL 152 + RYPAG+IK+ E A AL++ + R E R+ +Q ACYPKF + CL A++R+R+ Sbjct: 35 VVGRYPAGAIKTQETADSALEDVKQARANIEARFNAEQHACYPKFFATSCLNKAKERRRV 94 Query: 153 TDKGIKAVEYEAKVFQRQATVDDRDRSLAEQRAKDEEDSARRLADQKQKEADSARKVQES 212 +K +E EA + R A V +RDR L E+ A++E + + A + K D+ + + E Sbjct: 95 DLLTVKPIEVEANAYIRHARVVERDRRLTEKAAENEGKAILQQAPGEGKTDDAGKSIHEQ 154 Query: 213 RTKNSEVQQRIDQNKNVPADYRVRQHEAEVQRQQ---AEEAARAPSRAANAAERQRRIQE 269 + + + Q++ AD + +++E + ++QQ A EAA RAAN + +++E Sbjct: 155 NSVSRDAQRK------ARADAQAKKNEKQAEKQQSLKANEAAEEQKRAANIRRYEEKVKE 208 Query: 270 AEEHRLEVERKKAENERERAER 291 + + E+ KKAE E+ + ++ Sbjct: 209 SAARQKEILEKKAEKEKAQQQK 230 >ref|YP_004752413.1| hypothetical protein CFU_1758 [Collimonas fungivorans Ter331] gb|AEK61590.1| hypothetical protein; putative signal peptide [Collimonas fungivorans Ter331] Length = 271 Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 66/187 (35%), Positives = 109/187 (58%), Gaps = 1/187 (0%) Query: 91 APIAQRYPAGSIKSDEAAQKALDEAAEDRQVAELRYILDQRACYPKFLVSDCLEAARDRK 150 A ++ RYP ++ S E A KAL + A+ + E R + +RACY KF V+ CL+ A++++ Sbjct: 52 AELSARYPLETLTSVETANKALTDVADAKAEVEARDLEQRRACYQKFFVNHCLDIAKEQR 111 Query: 151 RLTDKGIKAVEYEAKVFQRQATVDDRDRSLAEQRAKDEEDSARRLADQKQKEADSARKVQ 210 R K I+ V+ A F R+ D+RD++L A ++A++ DQ+ KE +A KV+ Sbjct: 112 RQAMKTIRPVDIVANAFLRKDRADERDKALEVHDAAQPAEAAQKAQDQQAKELSNAEKVK 171 Query: 211 ESRTKNSEVQQRIDQNKNVPADYRVRQHEAEVQRQQAEEAARAPSRAANAAERQRRIQEA 270 + K EV ++ AD RV +H A++Q+ Q +EAA+A RAAN A +++ +E+ Sbjct: 172 QGTAKEKEVAANTRKHMG-EADKRVAEHNAKLQKAQQDEAAKASERAANVAAFEKKAKES 230 Query: 271 EEHRLEV 277 + EV Sbjct: 231 AARQKEV 237 >ref|YP_001353207.1| hypothetical protein mma_1517 [Janthinobacterium sp. Marseille] gb|ABR90886.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 230 Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 65/191 (34%), Positives = 106/191 (55%), Gaps = 8/191 (4%) Query: 93 IAQRYPAGSIKSDEAAQKALDEAAEDRQVAELRYILDQRACYPKFLVSDCLEAARDRKRL 152 + QRYPA SIKS+E A++A+ E + R E R+ DQRACY KF + C++ ++++R+ Sbjct: 39 LQQRYPADSIKSNEVAERAVAEVTKARADIEERFAADQRACYKKFFTTSCIDKIKEQRRI 98 Query: 153 TDKGIKAVEYEAKVFQRQATVDDRDRSLAEQRAKDEEDSARRLADQKQKEADSARKVQES 212 IK +E EA + R A VD+RDR LAE+ A++ E +A A+ + + K Sbjct: 99 DLASIKPIEIEANSYIRHAKVDERDRRLAEKNAQNVEKAA---ANADKAVDERTPKEGPG 155 Query: 213 RTKNSEVQQRIDQNKNVPADYRVRQHEAEVQRQQAEEAARAPSRAANAAERQRRIQEAEE 272 T+ ++ + R D A++ +Q + + E A A RA N + +++ +EE Sbjct: 156 ATEEAQRKARADGYAKRNAEFAEKQ-----RLLKENEEADAQKRAENVKRYEEKVRASEE 210 Query: 273 HRLEVERKKAE 283 + E+ RKKAE Sbjct: 211 KQKEIARKKAE 221