BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3465.p         (141 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776352.1| nucleoside-diphosphate kinase [Herbaspirillu...   256   7e-67
ref|YP_001099562.1| nucleoside diphosphate kinase [Herminiimonas...   243   7e-63
ref|YP_001353821.1| nucleoside diphosphate kinase [Janthinobacte...   243   9e-63
ref|ZP_08503741.1| Nucleoside diphosphate kinase [Methyloversati...   241   2e-62
ref|ZP_02463274.1| nucleoside diphosphate kinase [Burkholderia t...   240   6e-62

>ref|YP_003776352.1| nucleoside-diphosphate kinase [Herbaspirillum seropedicae SmR1]
 emb|CAM32572.1| Nucleoside-diphosphate kinase protein [Herbaspirillum seropedicae]
 gb|ADJ64444.1| nucleoside-diphosphate kinase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 141

 Score =  256 bits (654), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 136/141 (96%), Positives = 140/141 (99%)

Query: 1   MAIERTLSIIKPDAVAKNVIGQIYSRFENAGLKVVAARMAQLSRAEAEGFYAVHRERPFF 60
           MAIERTLSIIKPDAVAKNVIGQIY+RFENAGLKV+AARMAQLSRAEAEGFYAVHRERPFF
Sbjct: 1   MAIERTLSIIKPDAVAKNVIGQIYTRFENAGLKVIAARMAQLSRAEAEGFYAVHRERPFF 60

Query: 61  KDLVDFMISGPVMIQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD 120
           KDLVDFM+SGPVMIQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD
Sbjct: 61  KDLVDFMVSGPVMIQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD 120

Query: 121 AEETAKGEIAYFFPALNVYSR 141
           A+ETAK EIAYFFPALNVYSR
Sbjct: 121 ADETAKVEIAYFFPALNVYSR 141


>ref|YP_001099562.1| nucleoside diphosphate kinase [Herminiimonas arsenicoxydans]
 sp|A4G4J8|NDK_HERAR RecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP
           kinase; AltName: Full=Nucleoside-2-P kinase
 emb|CAL61435.1| nucleoside diphosphate kinase (NDK) (NDP kinase) (Nucleoside-2-P
           kinase) [Herminiimonas arsenicoxydans]
          Length = 141

 Score =  243 bits (620), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 131/141 (92%), Positives = 135/141 (95%)

Query: 1   MAIERTLSIIKPDAVAKNVIGQIYSRFENAGLKVVAARMAQLSRAEAEGFYAVHRERPFF 60
           MAIERTLSIIKPDAVAKNVIGQIYSRFE AGLK++AARMAQLSRAEAEGFYAVH  RPFF
Sbjct: 1   MAIERTLSIIKPDAVAKNVIGQIYSRFEGAGLKIIAARMAQLSRAEAEGFYAVHSARPFF 60

Query: 61  KDLVDFMISGPVMIQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD 120
           KDLVDFMISGPVMIQVLEGE AI K+RDLMGATDPKKAEKGTIRADFADSIDANAVHGSD
Sbjct: 61  KDLVDFMISGPVMIQVLEGENAIAKHRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD 120

Query: 121 AEETAKGEIAYFFPALNVYSR 141
           AEETAK EIAY+FPALNVYSR
Sbjct: 121 AEETAKVEIAYYFPALNVYSR 141


>ref|YP_001353821.1| nucleoside diphosphate kinase [Janthinobacterium sp. Marseille]
 sp|A6SZX4|NDK_JANMA RecName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP
           kinase; AltName: Full=Nucleoside-2-P kinase
 gb|ABR88794.1| nucleoside-diphosphate kinase [Janthinobacterium sp. Marseille]
          Length = 141

 Score =  243 bits (619), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 129/141 (91%), Positives = 135/141 (95%)

Query: 1   MAIERTLSIIKPDAVAKNVIGQIYSRFENAGLKVVAARMAQLSRAEAEGFYAVHRERPFF 60
           MAIERTLSIIKPDAVAKNVIGQIYSRFE AGLK+VAARM QLSRAEAEGFYAVH  RPFF
Sbjct: 1   MAIERTLSIIKPDAVAKNVIGQIYSRFEGAGLKIVAARMTQLSRAEAEGFYAVHSARPFF 60

Query: 61  KDLVDFMISGPVMIQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD 120
           KDLVDFMISGPV+IQVLEGE AI+K+RDLMGATDPKKA+KGTIRADFADSIDANAVHGSD
Sbjct: 61  KDLVDFMISGPVIIQVLEGENAIIKHRDLMGATDPKKADKGTIRADFADSIDANAVHGSD 120

Query: 121 AEETAKGEIAYFFPALNVYSR 141
           AEETAK EIAY+FPALNVYSR
Sbjct: 121 AEETAKVEIAYYFPALNVYSR 141


>ref|ZP_08503741.1| Nucleoside diphosphate kinase [Methyloversatilis universalis FAM5]
 gb|EGK72917.1| Nucleoside diphosphate kinase [Methyloversatilis universalis FAM5]
          Length = 141

 Score =  241 bits (616), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 129/141 (91%), Positives = 133/141 (94%)

Query: 1   MAIERTLSIIKPDAVAKNVIGQIYSRFENAGLKVVAARMAQLSRAEAEGFYAVHRERPFF 60
           MA ERTLSIIKPDAVAKNVIG+IY RFE+AGLK+VA+RM QLSRAEAEGFYAVHRERPFF
Sbjct: 1   MAAERTLSIIKPDAVAKNVIGKIYQRFEDAGLKIVASRMTQLSRAEAEGFYAVHRERPFF 60

Query: 61  KDLVDFMISGPVMIQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD 120
           KDLVDFMISGPVMIQVLEGEGAILKNRDLMGATDPKKA  GTIRADFADSIDANAVHGSD
Sbjct: 61  KDLVDFMISGPVMIQVLEGEGAILKNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSD 120

Query: 121 AEETAKGEIAYFFPALNVYSR 141
           A ETA  EIAYFFPALNVYSR
Sbjct: 121 APETAAVEIAYFFPALNVYSR 141


>ref|ZP_02463274.1| nucleoside diphosphate kinase [Burkholderia thailandensis MSMB43]
          Length = 141

 Score =  240 bits (612), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 128/141 (90%), Positives = 134/141 (95%)

Query: 1   MAIERTLSIIKPDAVAKNVIGQIYSRFENAGLKVVAARMAQLSRAEAEGFYAVHRERPFF 60
           MA+ERTLSIIKPDAVAKNVIGQIYSRFENAGLK+VAARMA LSRA+AE FYAVH ERPFF
Sbjct: 1   MALERTLSIIKPDAVAKNVIGQIYSRFENAGLKIVAARMAHLSRADAEKFYAVHAERPFF 60

Query: 61  KDLVDFMISGPVMIQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD 120
           KDLVDFMISGPVMIQVLEGE AILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD
Sbjct: 61  KDLVDFMISGPVMIQVLEGEDAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD 120

Query: 121 AEETAKGEIAYFFPALNVYSR 141
           A ETA+ EIA+FFP +NVYSR
Sbjct: 121 APETARVEIAFFFPEMNVYSR 141