BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3464.p (390 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776351.1| Fe-S-cluster redox enzyme protein [Herbaspir... 797 0.0 ref|ZP_08275720.1| hypothetical protein IMCC9480_747 [Oxalobacte... 731 0.0 ref|YP_001353820.1| hypothetical protein mma_2130 [Janthinobacte... 731 0.0 ref|YP_004752568.1| ribosomal RNA large subunit methyltransferas... 722 0.0 ref|YP_001099563.1| hypothetical protein HEAR1261 [Herminiimonas... 707 0.0 >ref|YP_003776351.1| Fe-S-cluster redox enzyme protein [Herbaspirillum seropedicae SmR1] gb|ADJ64443.1| Fe-S-cluster redox enzyme protein [Herbaspirillum seropedicae SmR1] Length = 390 Score = 797 bits (2059), Expect = 0.0, Method: Composition-based stats. Identities = 384/390 (98%), Positives = 386/390 (98%) Query: 1 MTTALTNLLDMDPAQLVAYCGELGEKPFRAKQLQRWIHQFGVSDFDQMTDLAKSLRDKLK 60 M TALTNLLDMDPAQLVAYCGELGEKPFRAKQLQRWIHQFGV+DFDQMTDLAKSLRDKLK Sbjct: 1 MNTALTNLLDMDPAQLVAYCGELGEKPFRAKQLQRWIHQFGVADFDQMTDLAKSLRDKLK 60 Query: 61 TRAEVRAPAIISDHTSTDGTRKWLVDVGQGNAVETVFIPEENRGTLCVSTQAGCAVNCRF 120 TRAEVRAPAIISDHTSTDGTRKWLVDVGQGNAVETVFIPEENRGTLCVSTQAGCAVNCRF Sbjct: 61 TRAEVRAPAIISDHTSTDGTRKWLVDVGQGNAVETVFIPEENRGTLCVSTQAGCAVNCRF 120 Query: 121 CSTGKQGFNRNLTVAEIIGQLWMAEFELRKTKGIEGGPKGERQITNVVMMGMGEPLLNFE 180 CSTGKQGFNRNL+VAEIIGQLWMAEFELRKTKGIEGGPKGERQITNVVMMGMGEPLLNFE Sbjct: 121 CSTGKQGFNRNLSVAEIIGQLWMAEFELRKTKGIEGGPKGERQITNVVMMGMGEPLLNFE 180 Query: 181 PTVTALRLMLDDNAYGLSRRRVTLSTSGVVPMIDKLSQECPVALAVSLHASNDALRDSLI 240 PTVTALRLMLDDNAYGLSRRRVTLSTSGVVPMI KLSQECPVALAVSLHASNDALRDSLI Sbjct: 181 PTVTALRLMLDDNAYGLSRRRVTLSTSGVVPMIGKLSQECPVALAVSLHASNDALRDSLI 240 Query: 241 PLNRKHPLRELMLACKRYLEFAPRDFITFEYCMLDGVNDTDTHARELVALVKEGETAIPC 300 PLNRKHPLRELMLACKRYLEFAPRDFITFEYCMLDGVNDTDTHARELVALVKEGETAIPC Sbjct: 241 PLNRKHPLRELMLACKRYLEFAPRDFITFEYCMLDGVNDTDTHARELVALVKEGETAIPC 300 Query: 301 KFNLIPFNPFPESGLTRSHNPRIKAFAQILMDAGIVTTIRKTRGDDIDAACGQLAGEVKD 360 KFNLIPFNPFPESGL RSHNPRIKAFAQILMDAGIVTTIRKTRGDDIDAACGQLAGEVKD Sbjct: 301 KFNLIPFNPFPESGLKRSHNPRIKAFAQILMDAGIVTTIRKTRGDDIDAACGQLAGEVKD 360 Query: 361 RTRVQERMQKMAEYQAKFGKDFGRIVEISG 390 RTRVQERMQKMAEYQ KFGKDFGRIVEISG Sbjct: 361 RTRVQERMQKMAEYQNKFGKDFGRIVEISG 390 >ref|ZP_08275720.1| hypothetical protein IMCC9480_747 [Oxalobacteraceae bacterium IMCC9480] gb|EGF30807.1| hypothetical protein IMCC9480_747 [Oxalobacteraceae bacterium IMCC9480] Length = 388 Score = 731 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 343/386 (88%), Positives = 368/386 (95%) Query: 4 ALTNLLDMDPAQLVAYCGELGEKPFRAKQLQRWIHQFGVSDFDQMTDLAKSLRDKLKTRA 63 ALTNLLD+DPAQLVAYCGELGEKPFRAKQLQRWIHQFG SDF MTDLAKSLRDKL TRA Sbjct: 2 ALTNLLDLDPAQLVAYCGELGEKPFRAKQLQRWIHQFGASDFTAMTDLAKSLRDKLATRA 61 Query: 64 EVRAPAIISDHTSTDGTRKWLVDVGQGNAVETVFIPEENRGTLCVSTQAGCAVNCRFCST 123 V++PA+ISDHTSTDGTRKWL+DVGQGNAVETVFIPEENRGTLC+STQAGCAVNCRFCST Sbjct: 62 VVQSPAVISDHTSTDGTRKWLLDVGQGNAVETVFIPEENRGTLCISTQAGCAVNCRFCST 121 Query: 124 GKQGFNRNLTVAEIIGQLWMAEFELRKTKGIEGGPKGERQITNVVMMGMGEPLLNFEPTV 183 GKQGFNRNLTV EIIGQLWMAEFELRKTKGIE GPKGERQITNVVMMGMGEPLLN+EPTV Sbjct: 122 GKQGFNRNLTVGEIIGQLWMAEFELRKTKGIEPGPKGERQITNVVMMGMGEPLLNYEPTV 181 Query: 184 TALRLMLDDNAYGLSRRRVTLSTSGVVPMIDKLSQECPVALAVSLHASNDALRDSLIPLN 243 TAL+LMLDDNAYGLSRRRVTLSTSGVVP IDKL Q+CPVALAVSLHASNDALRDSL+PLN Sbjct: 182 TALKLMLDDNAYGLSRRRVTLSTSGVVPNIDKLGQDCPVALAVSLHASNDALRDSLVPLN 241 Query: 244 RKHPLRELMLACKRYLEFAPRDFITFEYCMLDGVNDTDTHARELVALVKEGETAIPCKFN 303 +K+PL+ELM AC RYLEFAPRDF+TFEYCMLDGVNDT+ HARELVALV+ G +PCKFN Sbjct: 242 KKYPLKELMAACVRYLEFAPRDFVTFEYCMLDGVNDTEQHARELVALVRHGAQLVPCKFN 301 Query: 304 LIPFNPFPESGLTRSHNPRIKAFAQILMDAGIVTTIRKTRGDDIDAACGQLAGEVKDRTR 363 LIPFNPFPESGLTRS+NP+IK FAQ+LMDAGIVTTIRKTRGDDIDAACGQLAGEV+DRT+ Sbjct: 302 LIPFNPFPESGLTRSNNPQIKLFAQVLMDAGIVTTIRKTRGDDIDAACGQLAGEVQDRTK 361 Query: 364 VQERMQKMAEYQAKFGKDFGRIVEIS 389 VQERMQKMAEYQ KFGKDFGR+VE++ Sbjct: 362 VQERMQKMAEYQQKFGKDFGRLVEVT 387 >ref|YP_001353820.1| hypothetical protein mma_2130 [Janthinobacterium sp. Marseille] sp|A6SZX3|RLMN_JANMA RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gb|ABR89366.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 387 Score = 731 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 342/387 (88%), Positives = 369/387 (95%), Gaps = 2/387 (0%) Query: 3 TALTNLLDMDPAQLVAYCGELGEKPFRAKQLQRWIHQFGVSDFDQMTDLAKSLRDKLKTR 62 T LTNLLD+DPAQL+AYCGELGEKPFRAKQLQRWIHQFG SDFD MTDLAKSLRDKL TR Sbjct: 2 TTLTNLLDLDPAQLIAYCGELGEKPFRAKQLQRWIHQFGASDFDAMTDLAKSLRDKLATR 61 Query: 63 AEVRAPAIISDHTSTDGTRKWLVDVGQGNAVETVFIPEENRGTLCVSTQAGCAVNCRFCS 122 A + APA+ISDHTS DGTRKWLVDVGQGNAVETVFIPEENRGTLC+STQAGCAVNCRFCS Sbjct: 62 AIIAAPAVISDHTSADGTRKWLVDVGQGNAVETVFIPEENRGTLCISTQAGCAVNCRFCS 121 Query: 123 TGKQGFNRNLTVAEIIGQLWMAEFELRKTKGIEGGPKGERQITNVVMMGMGEPLLNFEPT 182 TGKQGFNRNL+V E+IGQLWMAEFELR+TKGIE GPKGERQITNVVMMGMGEPLLN+EPT Sbjct: 122 TGKQGFNRNLSVGEVIGQLWMAEFELRRTKGIEPGPKGERQITNVVMMGMGEPLLNYEPT 181 Query: 183 VTALRLMLDDNAYGLSRRRVTLSTSGVVPMIDKLSQECPVALAVSLHASNDALRDSLIPL 242 VTAL+LMLDDNAYGLSRRRVTLSTSGVVPMIDKLSQ+C VALAVSLHASNDALRD L+PL Sbjct: 182 VTALKLMLDDNAYGLSRRRVTLSTSGVVPMIDKLSQDCAVALAVSLHASNDALRDGLVPL 241 Query: 243 NRKHPLRELMLACKRYLEFAPRDFITFEYCMLDGVNDTDTHARELVALVKEGETAIPCKF 302 N+K+PL ELM ACKRYLEFAPRDF+TFEYCMLDGVND+D HAREL+ALV++ + +PCKF Sbjct: 242 NKKYPLVELMAACKRYLEFAPRDFVTFEYCMLDGVNDSDQHARELIALVRQAD--VPCKF 299 Query: 303 NLIPFNPFPESGLTRSHNPRIKAFAQILMDAGIVTTIRKTRGDDIDAACGQLAGEVKDRT 362 NLIPFNPFPESGLTRSHNPRIKAFAQ+LMDAGIVTT+RKTRGDDIDAACGQLAGEV+DRT Sbjct: 300 NLIPFNPFPESGLTRSHNPRIKAFAQVLMDAGIVTTVRKTRGDDIDAACGQLAGEVQDRT 359 Query: 363 RVQERMQKMAEYQAKFGKDFGRIVEIS 389 RVQ+RM+KMAEYQ KFGK+FGRIVEIS Sbjct: 360 RVQDRMKKMAEYQEKFGKNFGRIVEIS 386 >ref|YP_004752568.1| ribosomal RNA large subunit methyltransferase N [Collimonas fungivorans Ter331] gb|AEK61745.1| Ribosomal RNA large subunit methyltransferase N [Collimonas fungivorans Ter331] Length = 391 Score = 722 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 341/389 (87%), Positives = 365/389 (93%), Gaps = 2/389 (0%) Query: 3 TALTNLLDMDPAQLVAYCGELGEKPFRAKQLQRWIHQFGVSDFDQMTDLAKSLRDKLKTR 62 TALTNLLD+DPAQL AYCGELGEKPFRAKQL RWIHQFG DFD MTDLAKSLRDKL TR Sbjct: 2 TALTNLLDLDPAQLTAYCGELGEKPFRAKQLLRWIHQFGAHDFDAMTDLAKSLRDKLATR 61 Query: 63 AEVRAPAIISDHTSTDGTRKWLVDVGQGNAVETVFIPEENRGTLCVSTQAGCAVNCRFCS 122 A + APA+ISDHTSTDGTRKWL+DVGQGNAVETVFIPEENRGTLC+STQAGCAVNCRFCS Sbjct: 62 AMIAAPAVISDHTSTDGTRKWLLDVGQGNAVETVFIPEENRGTLCISTQAGCAVNCRFCS 121 Query: 123 TGKQGFNRNLTVAEIIGQLWMAEFELRKTKGIEGGPKGERQITNVVMMGMGEPLLNFEPT 182 TGKQGF+RNLTV EIIGQLWMAEFELRK+KGIE G KGERQITNVVMMGMGEPLLN+EPT Sbjct: 122 TGKQGFSRNLTVGEIIGQLWMAEFELRKSKGIEPGHKGERQITNVVMMGMGEPLLNYEPT 181 Query: 183 VTALRLMLDDNAYGLSRRRVTLSTSGVVPMIDKLSQECPVALAVSLHASNDALRDSLIPL 242 VTAL+LMLDDNAYGLSRRRVTLSTSGVVPMIDKLSQ+C VA+AVSLHASND LRD L+PL Sbjct: 182 VTALKLMLDDNAYGLSRRRVTLSTSGVVPMIDKLSQDCAVAMAVSLHASNDTLRDGLVPL 241 Query: 243 NRKHPLRELMLACKRYLEFAPRDFITFEYCMLDGVNDTDTHARELVALVK--EGETAIPC 300 N+K+PLR+LM ACKRYLEFAPRDFITFEYCMLDGVNDTD HAREL+ALV+ G A+PC Sbjct: 242 NKKYPLRDLMAACKRYLEFAPRDFITFEYCMLDGVNDTDAHARELIALVQGHAGGPAVPC 301 Query: 301 KFNLIPFNPFPESGLTRSHNPRIKAFAQILMDAGIVTTIRKTRGDDIDAACGQLAGEVKD 360 KFNLIPFNPFPESGL RS+NPRIKAFAQILMDAGIVTT+RKTRGDDIDAACGQLAGEV+D Sbjct: 302 KFNLIPFNPFPESGLKRSNNPRIKAFAQILMDAGIVTTVRKTRGDDIDAACGQLAGEVQD 361 Query: 361 RTRVQERMQKMAEYQAKFGKDFGRIVEIS 389 RTRVQERMQKM EYQ KFGK+FGRI+E+S Sbjct: 362 RTRVQERMQKMTEYQQKFGKNFGRIIEVS 390 >ref|YP_001099563.1| hypothetical protein HEAR1261 [Herminiimonas arsenicoxydans] sp|A4G4J9|RLMN_HERAR RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase emb|CAL61436.1| putative Fe-S-cluster redox enzyme [Herminiimonas arsenicoxydans] Length = 386 Score = 707 bits (1826), Expect = 0.0, Method: Composition-based stats. Identities = 331/376 (88%), Positives = 359/376 (95%), Gaps = 4/376 (1%) Query: 13 PAQLVAYCGELGEKPFRAKQLQRWIHQFGVSDFDQMTDLAKSLRDKLKTRAEVRAPAIIS 72 PAQL+AYCGELGEKPFRAKQLQRWIHQFG SDFD MTDLAKSLRDKLKTRA + APA+IS Sbjct: 13 PAQLIAYCGELGEKPFRAKQLQRWIHQFGASDFDAMTDLAKSLRDKLKTRAMIAAPAVIS 72 Query: 73 DHTSTDGTRKWLVDVGQGNAVETVFIPEENRGTLCVSTQAGCAVNCRFCSTGKQGFNRNL 132 DHTS+DGTRKWL+DVGQGNAVETVFIPEENRGTLC+STQAGCAVNCRFCSTGKQGFNRNL Sbjct: 73 DHTSSDGTRKWLIDVGQGNAVETVFIPEENRGTLCISTQAGCAVNCRFCSTGKQGFNRNL 132 Query: 133 TVAEIIGQLWMAEFELRKTKGIEGGPKGERQITNVVMMGMGEPLLNFEPTVTALRLMLDD 192 +V EIIGQLWMAEFELR+TKGIE GPKGERQITNVVMMGMGEPLLN+EPTVTAL+LMLDD Sbjct: 133 SVGEIIGQLWMAEFELRRTKGIEPGPKGERQITNVVMMGMGEPLLNYEPTVTALKLMLDD 192 Query: 193 NAYGLSRRRVTLSTSGVVPMIDKLSQECPVALAVSLHASNDALRDSLIPLNRKHPLRELM 252 NAYGLSRRRVTLSTSGVVPMIDKLSQ+C VALAVSLHASNDALRD L+PLN+K+PL+ELM Sbjct: 193 NAYGLSRRRVTLSTSGVVPMIDKLSQDCAVALAVSLHASNDALRDGLVPLNKKYPLQELM 252 Query: 253 LACKRYLEFAPRDFITFEYCMLDGVNDTDTHARELVALVKEGETAIPCKFNLIPFNPFPE 312 ACKRYLEFAPRDF+TFEYCMLDGVND+D HAREL+ LV++ +PCKFNLIPFNPFPE Sbjct: 253 AACKRYLEFAPRDFVTFEYCMLDGVNDSDQHARELLTLVRD----VPCKFNLIPFNPFPE 308 Query: 313 SGLTRSHNPRIKAFAQILMDAGIVTTIRKTRGDDIDAACGQLAGEVKDRTRVQERMQKMA 372 SGLTRS+NPRIKAFAQ+LMD G+VTTIRKTRGDDIDAACGQLAGEV+DRTRVQ+RM+KMA Sbjct: 309 SGLTRSNNPRIKAFAQVLMDGGLVTTIRKTRGDDIDAACGQLAGEVQDRTRVQDRMKKMA 368 Query: 373 EYQAKFGKDFGRIVEI 388 EYQ KFGK+FGRIVEI Sbjct: 369 EYQEKFGKNFGRIVEI 384