BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3463.p (368 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776350.1| transmembrane protein [Herbaspirillum serope... 356 4e-96 ref|XP_002538072.1| conserved hypothetical protein [Ricinus comm... 347 3e-93 ref|YP_001099565.1| hypothetical protein HEAR1263 [Herminiimonas... 155 1e-35 ref|YP_001353818.1| hypothetical protein mma_2128 [Janthinobacte... 132 1e-28 ref|ZP_08275722.1| putative membrane protein [Oxalobacteraceae b... 119 1e-24 >ref|YP_003776350.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64442.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 360 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 261/368 (70%), Positives = 290/368 (78%), Gaps = 8/368 (2%) Query: 1 MSDQQMNEMSSQQPQDPGPSSPAQVLPGAALAAARQKKGWTIEQAASLVKLAPRQIMAIE 60 MSDQQMNE+ SQ + LPGA LAA RQKKGW++EQ ASLVKLAPRQI AIE Sbjct: 1 MSDQQMNEVPSQPSPEGAQPVQGPSLPGAMLAAQRQKKGWSVEQVASLVKLAPRQIQAIE 60 Query: 61 ADNYAALPGLAVARGFVRSYAKVLGLDVHAVTASLPQESAVQQRDHIVPQHQLSTPFSEG 120 ADNYAALPGLAVARGFVRSYAKV+GLD +A+TA++PQES V QRDHIVPQH LSTPFSEG Sbjct: 61 ADNYAALPGLAVARGFVRSYAKVVGLDANALTAAMPQESDVAQRDHIVPQHSLSTPFSEG 120 Query: 121 PLPAMMMSTRGNSSALPIVAGVVVVALLAGAAAVRWTELGANVPQLAFLKSHHEEAAAAS 180 PLPAMMMSTRGNSS LPI+AGVVVVALLAG AAVRW++LGANVPQLA+LKSH E+AAA Sbjct: 121 PLPAMMMSTRGNSSPLPIIAGVVVVALLAGGAAVRWSDLGANVPQLAWLKSHKSESAAAP 180 Query: 181 GTSPDAQNVQSAETASSTETPVNARVETITSAPAEEPAKPAAPVAEAPAPLAQTPVAAKP 240 +A A S+ETPVNARVETIT A E AA V APA A TP AA+ Sbjct: 181 ELPANAD-------AGSSETPVNARVETITPASDEAAKSAAAAVEAAPAQ-AATPAAAET 232 Query: 241 EPVQAATPAASQPASTPAPAAASAPASAASAAPAQMASTTVPSGLNIVNSKDLLRLTFRE 300 A A + + A+A+ AS ++ APAQ + TTVPSGLNIVNSKD+LRLTFRE Sbjct: 233 ASAPAHAADAPAASVPASAASAANAASGSAPAPAQASGTTVPSGLNIVNSKDMLRLTFRE 292 Query: 301 DSWVEIRRADKSTVISRLLKAGTTETFDVSDATTLIIGNAAGVDASLRGQPLDLKTPGGS 360 DSWVEIRRADKST+ISRLLKAGTTE FDVSDAT+L IGNAAGVDA+LRGQPLDLKTPGGS Sbjct: 293 DSWVEIRRADKSTIISRLLKAGTTEAFDVSDATSLTIGNAAGVDATLRGQPLDLKTPGGS 352 Query: 361 NVARLNLN 368 NVAR+NLN Sbjct: 353 NVARINLN 360 >ref|XP_002538072.1| conserved hypothetical protein [Ricinus communis] gb|EEF24311.1| conserved hypothetical protein [Ricinus communis] Length = 355 Score = 347 bits (889), Expect = 3e-93, Method: Composition-based stats. Identities = 257/363 (70%), Positives = 286/363 (78%), Gaps = 8/363 (2%) Query: 6 MNEMSSQQPQDPGPSSPAQVLPGAALAAARQKKGWTIEQAASLVKLAPRQIMAIEADNYA 65 MNE+ SQ + LPGA LAA RQKKGW++EQ ASLVKLAPRQI AIEADNYA Sbjct: 1 MNEVPSQPSPEGAQPVQGPSLPGAMLAAQRQKKGWSVEQVASLVKLAPRQIQAIEADNYA 60 Query: 66 ALPGLAVARGFVRSYAKVLGLDVHAVTASLPQESAVQQRDHIVPQHQLSTPFSEGPLPAM 125 ALPGLAVARGFVRSYAKV+GLD +A+TA++PQES V QRDHIVPQH LSTPFSEGPLPAM Sbjct: 61 ALPGLAVARGFVRSYAKVVGLDANALTAAMPQESDVAQRDHIVPQHSLSTPFSEGPLPAM 120 Query: 126 MMSTRGNSSALPIVAGVVVVALLAGAAAVRWTELGANVPQLAFLKSHHEEAAAASGTSPD 185 MMSTRGNSS LPI+AGVVVVALLAG AAVRW++LGANVPQLA+LKSH E+AAA + Sbjct: 121 MMSTRGNSSPLPIIAGVVVVALLAGGAAVRWSDLGANVPQLAWLKSHKSESAAAPELPAN 180 Query: 186 AQNVQSAETASSTETPVNARVETITSAPAEEPAKPAAPVAEAPAPLAQTPVAAKPEPVQA 245 A A S+ETPVNARVETIT A E AA V APA A TP AA+ A Sbjct: 181 AD-------AGSSETPVNARVETITPASDEAAKSAAAAVEAAPAQ-AATPAAAETASAPA 232 Query: 246 ATPAASQPASTPAPAAASAPASAASAAPAQMASTTVPSGLNIVNSKDLLRLTFREDSWVE 305 A + + A+A+ ASA++ APAQ + TTVPSGLNIVNSKD+LRLTFREDSWVE Sbjct: 233 HAADAPAASVPASAASAANAASASAPAPAQASGTTVPSGLNIVNSKDMLRLTFREDSWVE 292 Query: 306 IRRADKSTVISRLLKAGTTETFDVSDATTLIIGNAAGVDASLRGQPLDLKTPGGSNVARL 365 IRRADKST+ISRLLKAGTTE FDVSDAT+L IGNAAGVDA+LRGQPLDLKTPGGSNVAR+ Sbjct: 293 IRRADKSTIISRLLKAGTTEAFDVSDATSLTIGNAAGVDATLRGQPLDLKTPGGSNVARI 352 Query: 366 NLN 368 NLN Sbjct: 353 NLN 355 >ref|YP_001099565.1| hypothetical protein HEAR1263 [Herminiimonas arsenicoxydans] emb|CAL61438.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 352 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 131/340 (38%), Positives = 184/340 (54%), Gaps = 18/340 (5%) Query: 28 GAALAAARQKKGWTIEQAASLVKLAPRQIMAIEADNYAALPGLAVARGFVRSYAKVLGLD 87 G LAA R+ +GWT Q AS + LA RQI A+EADNYAALPG+ + RGF+RSYAKVL D Sbjct: 30 GTQLAALREARGWTTVQIASQLNLANRQIQALEADNYAALPGMVIVRGFIRSYAKVLQTD 89 Query: 88 VHAVTASLPQESAVQQRDHIVPQHQLSTPFSEGPLPAMMMSTRGNSSALPIVAGVVVVAL 147 + A++ ++ V + ++ LS FSE L + + + ++A +V+ L Sbjct: 90 PAPILAAVIDDTVVPPV-LLPERNTLSASFSETRLSPSGSRGLSSKTVMGVLALLVIGVL 148 Query: 148 LAGAAAVRWTELGANVPQLAFLKSHHEEAAAASGTSPDAQNVQSAETASSTETPVNARVE 207 L A + W G +A ++ + +++ + + E P Sbjct: 149 LFAALRMGWLPGGV----------------SAVSSTAEEKSIPTESAEEAVEVPATQTEA 192 Query: 208 TITSAPAEEPAKPAAPVAEAPAPLAQTPVAAKPEPVQAATPAASQPASTPAPAAASAPAS 267 ++ A EP +PA P A P + P A +PV A A A TP P + +APA Sbjct: 193 VEATSGANEPVQPAVPEAARPPAVTPAPAVATVKPVTAPHVPAPVLAPTPTPVSVTAPAG 252 Query: 268 AASAAPAQMASTTVPSGLNIVNSKDLLRLTFREDSWVEIRRADKSTVISRLLKAGTTETF 327 AAP Q + +P V+SKD L + REDSWVEI+RAD S V+SRLLKAG+ E Sbjct: 253 LPVAAP-QASKVAIPVAAVPVDSKDALAIKVREDSWVEIKRADNSIVLSRLLKAGSAEVV 311 Query: 328 DVSDATTLIIGNAAGVDASLRGQPLDLKTPGGSNVARLNL 367 +VS +++IGNAAGVD +LRG P+D+ SNVARLNL Sbjct: 312 EVSGPVSMVIGNAAGVDVTLRGAPIDVVAGNTSNVARLNL 351 >ref|YP_001353818.1| hypothetical protein mma_2128 [Janthinobacterium sp. Marseille] gb|ABR89367.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 343 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 130/371 (35%), Positives = 183/371 (49%), Gaps = 36/371 (9%) Query: 2 SDQQMNEMSSQQPQDPGPSS--PAQVLP-GAALAAARQKKGWTIEQAASLVKLAPRQIMA 58 +D +NE+ +P P++ P V+ GA LA RQ++GWT+EQ A+ + LA RQI A Sbjct: 3 NDVPVNEVMDDAAPEPVPATEKPEPVISAGAQLATLRQERGWTVEQVANQLNLASRQIQA 62 Query: 59 IEADNYAALPGLAVARGFVRSYAKVLGLDVHAVTASLPQESAVQQRDHIVPQHQ--LSTP 116 +E DNYAALPG+ + RGF+RSY+KVL +D + A + ++ I+P + LS Sbjct: 63 LEEDNYAALPGMVIVRGFIRSYSKVLRVDPAPILAGIKDDTVAPA---ILPPERSPLSAS 119 Query: 117 FSEGPLPAMMMSTRGNSSALPIVAGVVVVALLAGAAAVRWTELGANVPQLAFLKSHHEEA 176 FSE L + + RG S + G++VV L A L A Sbjct: 120 FSETKL--LSSNQRGLRSKAVLGGGILVVLGLLAYAGQHMGWLSHG--------PAGSPA 169 Query: 177 AAASGTSPDAQNVQSAETASSTETPVNARVETITSAPAEEPAKPAAPVAEAPAPLAQTPV 236 +P + + + T P+ T T P +PA+ A PVAE A A+ V Sbjct: 170 KVEEKLAPIELSDAAPQAVVETAPPLEVLEVTETKTPEVKPAETAKPVAETVAAAAKPTV 229 Query: 237 AAKPEPVQAATPAASQPASTPAPAAASAPASAASAAPAQMASTTVPSGLNIVNSKDLLRL 296 A AA A A A+ +SK+ L + Sbjct: 230 PAPASVATAAPAVAPLTPVAKPAAVAAPKPVVPV------------------DSKNALAI 271 Query: 297 TFREDSWVEIRRADKSTVISRLLKAGTTETFDVSDATTLIIGNAAGVDASLRGQPLDLKT 356 REDSWVEI+ AD S ++SRLLKAG++E V+ +++IGNAAGVD +LRG P+D+ T Sbjct: 272 NVREDSWVEIKGADNSVILSRLLKAGSSEAVAVTGPVSVVIGNAAGVDVTLRGAPVDVVT 331 Query: 357 PGGSNVARLNL 367 SNVARLNL Sbjct: 332 GNSSNVARLNL 342 >ref|ZP_08275722.1| putative membrane protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF30809.1| putative membrane protein [Oxalobacteraceae bacterium IMCC9480] Length = 321 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 113/356 (31%), Positives = 165/356 (46%), Gaps = 45/356 (12%) Query: 14 PQDPGPSSPAQVLPGAALAAARQKKGWTIEQAASLVKLAPRQIMAIEADNYAALPGLAVA 73 P P S+ + + PGA +A R +GW+I + S + LAPRQI A+E DN+AALPG+AV Sbjct: 8 PGQPEQSAQSTLSPGAQMARQRVARGWSISEVGSHLNLAPRQIQAMEDDNHAALPGIAVT 67 Query: 74 RGFVRSYAKVLGLDVHAVTASLPQESAVQQRDHIVPQHQLSTPFSEGPLPAMMMSTRGNS 133 RGF+R+YAK+LG+D + +L I+P LS + M + ++ Sbjct: 68 RGFIRAYAKLLGIDAAPLMVNL-----------ILPVEDLSGSVAAHARRTMAPTRFSDN 116 Query: 134 SALPIVAGVVVVALLAGAAAVRWTELGANVPQLAFLKSHHEEAAAASGTSPDAQNVQSAE 193 L A+ R + + + A G P SA+ Sbjct: 117 R-------------LTSASGHRSSSKWYSALLVVVAVVAISSVAQHYGWLPHDLETASAK 163 Query: 194 TASSTETPVNARVETITSAPAEEPAKPAAPVAEAPAPLAQTPVAAKPEPVQAATPAASQP 253 +S VE +S P P + P+ TPA S P Sbjct: 164 VSSGLSVLRGDAVEPDSSGPEPSPGH----------------IEITPDMPIGTTPALSAP 207 Query: 254 ASTPAPAAASAP--ASAASAAPAQMASTTVPSGLNIVNSKDLLRLTFREDSWVEIRRADK 311 + P A + P A +A P + P+ + N L L R DSW+EIR + Sbjct: 208 VAVDVPVAEAKPPVVPATAAIPPVDLALVAPAAASTNNQ---LVLNVRSDSWIEIRGSGT 264 Query: 312 STVISRLLKAGTTETFDVSDATTLIIGNAAGVDASLRGQPLDLKTPGGSNVARLNL 367 +TV S+L +AG+ TFD+++ TL++GNAAGVDA+LRG PL L + +NVAR+NL Sbjct: 265 TTVASKLYRAGSVGTFDIAEPVTLVVGNAAGVDATLRGAPLPLPSASNNNVARINL 320