BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3461.p (451 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776348.1| histidyl-tRNA synthetase [Herbaspirillum ser... 895 0.0 ref|YP_001353816.1| histidyl-tRNA synthetase [Janthinobacterium ... 820 0.0 ref|YP_004752571.1| histidyl-tRNA synthetase [Collimonas fungivo... 794 0.0 ref|YP_001099567.1| histidine tRNA synthetase [Herminiimonas ars... 791 0.0 ref|ZP_08275724.1| Histidyl-tRNA synthetase [Oxalobacteraceae ba... 720 0.0 >ref|YP_003776348.1| histidyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gb|ADJ64440.1| histidyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1] Length = 451 Score = 895 bits (2313), Expect = 0.0, Method: Composition-based stats. Identities = 431/438 (98%), Positives = 436/438 (99%) Query: 1 MSEQKKVEKIVGVKGMNDILPADAPLWELFENTVQSVLKSYGFQQIRTPIVEPTALFARG 60 MSEQKKVEKIVGVKGMNDILPADAPLWELFENTVQSVLKSYGFQQIRTPIVEPTALFARG Sbjct: 1 MSEQKKVEKIVGVKGMNDILPADAPLWELFENTVQSVLKSYGFQQIRTPIVEPTALFARG 60 Query: 61 LGEVTDIVEKEMYSFTDSMNGDNLTLRPENTAGVVRAALEHNLTYDGPKRLWYVGPMFRH 120 LGEVTDIVEKEMYSFTDSMNGDNLTLRPENTAGVVRAALEHNLTYDGPKRLWYVGPMFRH Sbjct: 61 LGEVTDIVEKEMYSFTDSMNGDNLTLRPENTAGVVRAALEHNLTYDGPKRLWYVGPMFRH 120 Query: 121 ERPQRGRYRQFHQVGAEAVGFSGPDIDAELIMMCQRLWDDLGLSDIRLELNSIGNAEERN 180 ERPQRGRYRQFHQVGAEAVGFSGPDIDAELIMMCQRLWDDLGLSDIRLELNSIGNAEERN Sbjct: 121 ERPQRGRYRQFHQVGAEAVGFSGPDIDAELIMMCQRLWDDLGLSDIRLELNSIGNAEERN 180 Query: 181 KHRADLIAYFEQHKDLLDTDAQRRLHANPLRILDTKNPAMQEMVNAAPKLLDYLGEESRA 240 KHRADLIAYFEQHKDLLDTDAQRRLHANPLRILDTKNPAMQEMVNAAPKLLDYLGEESRA Sbjct: 181 KHRADLIAYFEQHKDLLDTDAQRRLHANPLRILDTKNPAMQEMVNAAPKLLDYLGEESRA 240 Query: 241 HFEGVQKILRHNNIPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPLIEMF 300 HFEGVQKILRHNNIPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPLIEMF Sbjct: 241 HFEGVQKILRHNNIPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPLIEMF 300 Query: 301 GGKPTPACGFAMGVERLLELMKANGEQYAPNQCDVYLVHQGEEAQLQSFVLAERLRTAGL 360 GGKPTPACGFAMGVERLLELMKA+GEQYAPNQCDVYLVHQGE+AQLQSFVLAERLRTAGL Sbjct: 301 GGKPTPACGFAMGVERLLELMKASGEQYAPNQCDVYLVHQGEDAQLQSFVLAERLRTAGL 360 Query: 361 DVVLHCASSNGGGSFKAQMKRADASGAAFAVIIGEDELKAGTATVKHMREGNAEEGRANQ 420 DVVLHCASSNGGGSFKAQMKRADASGAAFAVIIGEDELK GTATVKHMREGNAEEGRANQ Sbjct: 361 DVVLHCASSNGGGSFKAQMKRADASGAAFAVIIGEDELKGGTATVKHMREGNAEEGRANQ 420 Query: 421 SNMAFDGVVDYIVEQIVG 438 +++ FDGVVDYIVEQIVG Sbjct: 421 NSLPFDGVVDYIVEQIVG 438 >ref|YP_001353816.1| histidyl-tRNA synthetase [Janthinobacterium sp. Marseille] gb|ABR88570.1| histidyl-tRNA synthetase [Janthinobacterium sp. Marseille] Length = 449 Score = 820 bits (2118), Expect = 0.0, Method: Composition-based stats. Identities = 389/451 (86%), Positives = 419/451 (92%), Gaps = 4/451 (0%) Query: 1 MSEQKKVEKIVGVKGMNDILPADAPLWELFENTVQSVLKSYGFQQIRTPIVEPTALFARG 60 MS+ KK EKIVGVKGMNDILPADAPLWELFENTV +VLKSYGFQQIRTPIVEPTALFARG Sbjct: 1 MSDTKKTEKIVGVKGMNDILPADAPLWELFENTVHTVLKSYGFQQIRTPIVEPTALFARG 60 Query: 61 LGEVTDIVEKEMYSFTDSMNGDNLTLRPENTAGVVRAALEHNLTYDGPKRLWYVGPMFRH 120 LGEVTDIVEKEMYSFTDSMNGD LTLRPE TAGVVRAALEHNLTYDGPKRLWY GPMFRH Sbjct: 61 LGEVTDIVEKEMYSFTDSMNGDQLTLRPECTAGVVRAALEHNLTYDGPKRLWYAGPMFRH 120 Query: 121 ERPQRGRYRQFHQVGAEAVGFSGPDIDAELIMMCQRLWDDLGLSDIRLELNSIGNAEERN 180 ERPQRGRYRQFHQ+GAEA+GF+GPDIDAELIMMCQRLWDDLGL D+RLELNSIGNAEERN Sbjct: 121 ERPQRGRYRQFHQIGAEAIGFAGPDIDAELIMMCQRLWDDLGLQDVRLELNSIGNAEERN 180 Query: 181 KHRADLIAYFEQHKDLLDTDAQRRLHANPLRILDTKNPAMQEMVNAAPKLLDYLGEESRA 240 KHRADLIAYFE++ DLLDT+AQ+RLH+NPLRILDTKNP MQ+MVNAAPKLLDYLGEESRA Sbjct: 181 KHRADLIAYFEKNADLLDTEAQKRLHSNPLRILDTKNPTMQDMVNAAPKLLDYLGEESRA 240 Query: 241 HFEGVQKILRHNNIPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPLIEMF 300 HFEGVQKILRHN IPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPL+EMF Sbjct: 241 HFEGVQKILRHNAIPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPLVEMF 300 Query: 301 GGKPTPACGFAMGVERLLELMKANGEQYAPNQCDVYLVHQGEEAQLQSFVLAERLRTAGL 360 GGKPTPACGFAMGVERLLELMKA+GEQ+APNQCDVY+VHQGEEAQLQ+ V+AERLR AGL Sbjct: 301 GGKPTPACGFAMGVERLLELMKASGEQFAPNQCDVYIVHQGEEAQLQASVVAERLRDAGL 360 Query: 361 DVVLHCASSNGGGSFKAQMKRADASGAAFAVIIGEDELKAGTATVKHMREGNAEEGRANQ 420 DVVLHCA++ G GSFK+QMKRAD SGAA+AVIIGEDE+ GTA VK MR E NQ Sbjct: 361 DVVLHCAAATGIGSFKSQMKRADGSGAAYAVIIGEDEIAQGTAVVKEMRNA---EAAGNQ 417 Query: 421 SNMAFDGVVDYIVEQIVGDHDHDHD-HVHYH 450 +++ F+G+ DY+V+QIVG HDH HD HVHYH Sbjct: 418 ASVPFEGIADYLVDQIVGAHDHAHDEHVHYH 448 >ref|YP_004752571.1| histidyl-tRNA synthetase [Collimonas fungivorans Ter331] gb|AEK61748.1| Histidyl-tRNA synthetase [Collimonas fungivorans Ter331] Length = 459 Score = 794 bits (2050), Expect = 0.0, Method: Composition-based stats. Identities = 387/458 (84%), Positives = 416/458 (90%), Gaps = 8/458 (1%) Query: 1 MSEQKKVEKIVGVKGMNDILPADAPLWELFENTVQSVLKSYGFQQIRTPIVEPTALFARG 60 MSE KK EKIVGVKGMNDILPADA LWELFENTV+SVLKSYGFQ+IRTPIVEPTALFARG Sbjct: 1 MSENKKAEKIVGVKGMNDILPADAALWELFENTVESVLKSYGFQKIRTPIVEPTALFARG 60 Query: 61 LGEVTDIVEKEMYSFTDSMNGDNLTLRPENTAGVVRAALEHNLTYDGPKRLWYVGPMFRH 120 LG VTDIVEKEMYSFTDSMNGDNLTLRPE+TAGVVRAA+EHNLTYDGPKRLWY GPMFRH Sbjct: 61 LGAVTDIVEKEMYSFTDSMNGDNLTLRPESTAGVVRAAIEHNLTYDGPKRLWYSGPMFRH 120 Query: 121 ERPQRGRYRQFHQVGAEAVGFSGPDIDAELIMMCQRLWDDLGLSDIRLELNSIGNAEERN 180 ERPQRGRYRQFHQVGAEA+GF+GPDIDAELIMMCQRLWDDLGL D++L+LNSIG+AEERN Sbjct: 121 ERPQRGRYRQFHQVGAEALGFTGPDIDAELIMMCQRLWDDLGLQDVKLQLNSIGDAEERN 180 Query: 181 KHRADLIAYFEQHKDLLDTDAQRRLHANPLRILDTKNPAMQEMVNAAPKLLDYLGEESRA 240 +HRADLIAYFEQHK+LLD DAQRRLH NPLRILDTKNPAMQ+MVN AP+LL YLG ES A Sbjct: 181 RHRADLIAYFEQHKELLDADAQRRLHTNPLRILDTKNPAMQDMVNGAPQLLSYLGAESLA 240 Query: 241 HFEGVQKILRHNNIPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPLIEMF 300 HFEGVQKIL HNNIPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPL+EMF Sbjct: 241 HFEGVQKILNHNNIPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPLVEMF 300 Query: 301 GGKPTPACGFAMGVERLLELMKANGEQYAPNQCDVYLVHQGEEAQLQSFVLAERLRTAGL 360 GGKPTPACGFAMG+ERLLELM+ANGEQ N+CDVYLVHQGE AQLQSFVLAERLR AGL Sbjct: 301 GGKPTPACGFAMGIERLLELMRANGEQAVRNECDVYLVHQGEAAQLQSFVLAERLRNAGL 360 Query: 361 DVVLHCASSNGGGSFKAQMKRADASGAAFAVIIGEDELKAGTATVKHMR-EGNAEEGRA- 418 DVVLHCAS+N GGSFK+QMKRADASGAA+A+IIGEDE+ TATVK +R EG+AE+ A Sbjct: 361 DVVLHCASANAGGSFKSQMKRADASGAAYAIIIGEDEVANQTATVKTLRAEGDAEKASAG 420 Query: 419 NQSNMAFDGVVDYIVEQIVG------DHDHDHDHVHYH 450 NQS + FD V DY+V+QIVG DH HVHYH Sbjct: 421 NQSVVPFDAVSDYLVDQIVGAGDDHDHDHGDHGHVHYH 458 >ref|YP_001099567.1| histidine tRNA synthetase [Herminiimonas arsenicoxydans] emb|CAL61440.1| histidine tRNA synthetase (Histidine--tRNA ligase) (HisRS) [Herminiimonas arsenicoxydans] Length = 448 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 376/438 (85%), Positives = 405/438 (92%), Gaps = 5/438 (1%) Query: 1 MSEQKKVEKIVGVKGMNDILPADAPLWELFENTVQSVLKSYGFQQIRTPIVEPTALFARG 60 MS+ KK EKIVGVKGMNDILPADAPLWELFENTV +VLKSYGFQQIRTPIVEPTALFARG Sbjct: 1 MSDTKKTEKIVGVKGMNDILPADAPLWELFENTVHTVLKSYGFQQIRTPIVEPTALFARG 60 Query: 61 LGEVTDIVEKEMYSFTDSMNGDNLTLRPENTAGVVRAALEHNLTYDGPKRLWYVGPMFRH 120 LG VTDIVEKEMYSFTDSMNGD LTLRPE TA VVRAALEHNLTYDGPKRLWY GPMFRH Sbjct: 61 LGAVTDIVEKEMYSFTDSMNGDELTLRPECTASVVRAALEHNLTYDGPKRLWYSGPMFRH 120 Query: 121 ERPQRGRYRQFHQVGAEAVGFSGPDIDAELIMMCQRLWDDLGLSDIRLELNSIGNAEERN 180 ERPQRGRYRQFHQ+GAEA+GFSGPDIDAELIMMCQRLWDDLGL D+RLELNSIGNAEERN Sbjct: 121 ERPQRGRYRQFHQIGAEAIGFSGPDIDAELIMMCQRLWDDLGLQDVRLELNSIGNAEERN 180 Query: 181 KHRADLIAYFEQHKDLLDTDAQRRLHANPLRILDTKNPAMQEMVNAAPKLLDYLGEESRA 240 KHRADLI+YFEQH +LLD +AQ+RLH+NPLRILDTKNPAMQEMVNAAPKLLDYLGE+SRA Sbjct: 181 KHRADLISYFEQHAELLDAEAQKRLHSNPLRILDTKNPAMQEMVNAAPKLLDYLGEDSRA 240 Query: 241 HFEGVQKILRHNNIPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPLIEMF 300 HFEGVQKIL HN IPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPL+EMF Sbjct: 241 HFEGVQKILNHNAIPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPLVEMF 300 Query: 301 GGKPTPACGFAMGVERLLELMKANGEQYAPNQCDVYLVHQGEEAQLQSFVLAERLRTAGL 360 GGKPTPACGFAMGVERLLELMKA+GE++ PNQCDVY+VHQGE AQLQ+ V+AERLR AGL Sbjct: 301 GGKPTPACGFAMGVERLLELMKASGEKFTPNQCDVYIVHQGEPAQLQASVVAERLRDAGL 360 Query: 361 DVVLHCASSNGGGSFKAQMKRADASGAAFAVIIGEDELKAGTATVKHMREGNAEEGRANQ 420 DVVLHCA+S G GSFK+QMKRAD SGAA+AVIIGEDE+ G A VK MR+ EG+ Q Sbjct: 361 DVVLHCAASAGIGSFKSQMKRADNSGAAYAVIIGEDEIAKGAAVVKEMRDA---EGK--Q 415 Query: 421 SNMAFDGVVDYIVEQIVG 438 S +AF+G+ DY+V+QIVG Sbjct: 416 SEVAFEGIADYLVDQIVG 433 >ref|ZP_08275724.1| Histidyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30811.1| Histidyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 464 Score = 720 bits (1859), Expect = 0.0, Method: Composition-based stats. Identities = 345/434 (79%), Positives = 387/434 (89%), Gaps = 1/434 (0%) Query: 5 KKVEKIVGVKGMNDILPADAPLWELFENTVQSVLKSYGFQQIRTPIVEPTALFARGLGEV 64 KK +KI VKGMNDILPADA LWELF+NTVQ+VLKSYGFQQIRTPIVE T+LFARGLG V Sbjct: 15 KKADKITAVKGMNDILPADAGLWELFDNTVQTVLKSYGFQQIRTPIVESTSLFARGLGTV 74 Query: 65 TDIVEKEMYSFTDSMNGDNLTLRPENTAGVVRAALEHNLTYDGPKRLWYVGPMFRHERPQ 124 TDIVEKEMYSF DSMNGD LTLRPE TAGVVRAA+EHNLTY+GPKRLWY GPMFRHERPQ Sbjct: 75 TDIVEKEMYSFADSMNGDLLTLRPEATAGVVRAAIEHNLTYEGPKRLWYTGPMFRHERPQ 134 Query: 125 RGRYRQFHQVGAEAVGFSGPDIDAELIMMCQRLWDDLGLSDIRLELNSIGNAEERNKHRA 184 RGRYRQFHQVGAEA+GFSGPDIDAEL+M+CQRLWDDLGL +IRLELNSIGNAEERN HR Sbjct: 135 RGRYRQFHQVGAEALGFSGPDIDAELMMLCQRLWDDLGLDNIRLELNSIGNAEERNSHRI 194 Query: 185 DLIAYFEQHKDLLDTDAQRRLHANPLRILDTKNPAMQEMVNAAPKLLDYLGEESRAHFEG 244 DLIAYFEQH +++D +A+RRLH NPLRILDTKNPAMQ MVNAAP+LL YLGEES+AHF+G Sbjct: 195 DLIAYFEQHLEVMDEEAKRRLHTNPLRILDTKNPAMQAMVNAAPQLLAYLGEESQAHFDG 254 Query: 245 VQKILRHNNIPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPLIEMFGGKP 304 VQ ILRHNN+PFTINPRLVRGMDYYNRTVFEWVTD+LGSQGTVC GGRYD L +MFGGKP Sbjct: 255 VQNILRHNNVPFTINPRLVRGMDYYNRTVFEWVTDELGSQGTVCAGGRYDTLFDMFGGKP 314 Query: 305 TPACGFAMGVERLLELMKANGEQYAPNQCDVYLVHQGEEAQLQSFVLAERLRTAGLDVVL 364 TP+CGFAMG+ERLLELMKA GE+YA +QCDVY+VHQG+ AQL++ V+AERLR AGLDVVL Sbjct: 315 TPSCGFAMGIERLLELMKAGGEKYAGSQCDVYVVHQGDAAQLKASVVAERLRDAGLDVVL 374 Query: 365 HCASSNGGGSFKAQMKRADASGAAFAVIIGEDELKAGTATVKHMREGNAEEGRANQSNMA 424 HCAS++ S KAQMKRADASGAAFAVI+GEDE+ ATVK +R + E + Q+ + Sbjct: 375 HCASAS-SSSVKAQMKRADASGAAFAVILGEDEVAGDMATVKALRATDGETHQHQQALVP 433 Query: 425 FDGVVDYIVEQIVG 438 FD V DY+V+QI+G Sbjct: 434 FDSVADYLVDQIIG 447