BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3456.p (374 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776343.1| GTP-binding protein [Herbaspirillum seropedi... 665 0.0 ref|YP_004752576.1| GTP-binding protein [Collimonas fungivorans ... 567 e-159 ref|YP_001353811.1| HflX GTP-binding protein [Janthinobacterium ... 554 e-156 ref|ZP_08273694.1| GTP-binding protein HflX [Oxalobacteraceae ba... 549 e-154 emb|CAL61445.2| GTP-binding protein HflX [Herminiimonas arsenico... 540 e-151 >ref|YP_003776343.1| GTP-binding protein [Herbaspirillum seropedicae SmR1] gb|ADJ64435.1| GTP-binding protein [Herbaspirillum seropedicae SmR1] Length = 374 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 364/374 (97%), Positives = 373/374 (99%) Query: 1 MRAALVGLDFGKNDFAASLDELFLLAKSAGAEPVITITGRRASPDAALFVGTGKAQEVAD 60 MRAALVGLDFGKNDFAASLDEL+LLAKSAGAEPVITITGRRASPDAALF+GTGKAQEVAD Sbjct: 1 MRAALVGLDFGKNDFAASLDELYLLAKSAGAEPVITITGRRASPDAALFIGTGKAQEVAD 60 Query: 61 AVADLQLELVIFNHALSPAQQRNLERVLKVRVLDRTSLILDIFAQRAKSHEGKVQVELAQ 120 AVADLQLELVIFNHALSPAQQRNLER+LKVRVLDRTSLILDIFAQRAKSHEGKVQVELAQ Sbjct: 61 AVADLQLELVIFNHALSPAQQRNLERLLKVRVLDRTSLILDIFAQRAKSHEGKVQVELAQ 120 Query: 121 LQHLATRLIRGWTHLERQKGGIGLRGPGETQLETDRRLLGERVKALRAVLAKLRRQHATQ 180 LQHL+TRLIRGWTHLERQKGGIGLRGPGETQLETDRRLLGERVKALRAVLAKLRRQHATQ Sbjct: 121 LQHLSTRLIRGWTHLERQKGGIGLRGPGETQLETDRRLLGERVKALRAVLAKLRRQHATQ 180 Query: 181 RRARGRSETFSVSLVGYTNAGKSTIFNSVAKAGVYAANQLFATLDTTSRRVYLGEVGHVV 240 RRARGR+ETFSVSLVGYTNAGKSTIFN++AKAGVYAANQLFATLDTTSRRVYLGEVGHVV Sbjct: 181 RRARGRNETFSVSLVGYTNAGKSTIFNALAKAGVYAANQLFATLDTTSRRVYLGEVGHVV 240 Query: 241 ISDTVGFIRELPHQLVEAFRATLEETIHADLLLHVVDAASPVRMEQIEQVNLVLKEIGAD 300 ISDTVGFIRELPHQLVEAFRATLEETIHADLLLHVVDAASPVRMEQIE+VNLVLKEIGAD Sbjct: 241 ISDTVGFIRELPHQLVEAFRATLEETIHADLLLHVVDAASPVRMEQIEEVNLVLKEIGAD 300 Query: 301 HVPQILVWNKIDAAGLEPTVEYDEYGKIQRVFVSAKSGAGLDLLREAIAASLKAALEARG 360 HVPQILVWNKIDAAGLEPTVEYDEYGKIQRVFVSAKSGAGLDLLREAIAASLKAALEARG Sbjct: 301 HVPQILVWNKIDAAGLEPTVEYDEYGKIQRVFVSAKSGAGLDLLREAIAASLKAALEARG 360 Query: 361 RSRSQPVDSEDMHA 374 RSRS+PVDS DMHA Sbjct: 361 RSRSEPVDSVDMHA 374 >ref|YP_004752576.1| GTP-binding protein [Collimonas fungivorans Ter331] gb|AEK61753.1| GTP-binding protein [Collimonas fungivorans Ter331] Length = 373 Score = 567 bits (1461), Expect = e-159, Method: Composition-based stats. Identities = 310/349 (88%), Positives = 329/349 (94%) Query: 1 MRAALVGLDFGKNDFAASLDELFLLAKSAGAEPVITITGRRASPDAALFVGTGKAQEVAD 60 MRAALVG+DFGK DFAASL+EL LLAKSAGA P++TITG+R+SPDAALFVG+GKAQE+AD Sbjct: 1 MRAALVGVDFGKGDFAASLEELSLLAKSAGAVPLVTITGKRSSPDAALFVGSGKAQEIAD 60 Query: 61 AVADLQLELVIFNHALSPAQQRNLERVLKVRVLDRTSLILDIFAQRAKSHEGKVQVELAQ 120 AV D +LE+VIFNHALSPAQQRNLERVLKVRVLDRTSLILDIFAQRAKSHEGKVQVELAQ Sbjct: 61 AVFDDELEIVIFNHALSPAQQRNLERVLKVRVLDRTSLILDIFAQRAKSHEGKVQVELAQ 120 Query: 121 LQHLATRLIRGWTHLERQKGGIGLRGPGETQLETDRRLLGERVKALRAVLAKLRRQHATQ 180 LQHLATRLIRGWTHLERQKGGIGLRGPGETQLETDRRLLG+RVKALRA L KL RQHATQ Sbjct: 121 LQHLATRLIRGWTHLERQKGGIGLRGPGETQLETDRRLLGDRVKALRARLDKLHRQHATQ 180 Query: 181 RRARGRSETFSVSLVGYTNAGKSTIFNSVAKAGVYAANQLFATLDTTSRRVYLGEVGHVV 240 RRARGRS T S+SLVGYTNAGKST+FN++AKAGVYAA+QLFATLDTTSRRVYLGE G VV Sbjct: 181 RRARGRSATISISLVGYTNAGKSTLFNALAKAGVYAADQLFATLDTTSRRVYLGEAGSVV 240 Query: 241 ISDTVGFIRELPHQLVEAFRATLEETIHADLLLHVVDAASPVRMEQIEQVNLVLKEIGAD 300 ISDTVGFIRELPHQLV AFRATLEETIHADLLLHVVDAASP RMEQIEQVNLVLKEIGAD Sbjct: 241 ISDTVGFIRELPHQLVAAFRATLEETIHADLLLHVVDAASPARMEQIEQVNLVLKEIGAD 300 Query: 301 HVPQILVWNKIDAAGLEPTVEYDEYGKIQRVFVSAKSGAGLDLLREAIA 349 H+PQILVWNKIDAA LEP VE DEY KIQRVFVSA+ G GLDLLR+AIA Sbjct: 301 HIPQILVWNKIDAAELEPAVERDEYDKIQRVFVSAQKGLGLDLLRQAIA 349 >ref|YP_001353811.1| HflX GTP-binding protein [Janthinobacterium sp. Marseille] gb|ABR89451.1| HflX GTP-binding protein [Janthinobacterium sp. Marseille] Length = 372 Score = 554 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 301/373 (80%), Positives = 336/373 (90%), Gaps = 2/373 (0%) Query: 1 MRAALVGLDFGKNDFAASLDELFLLAKSAGAEPVITITGRRASPDAALFVGTGKAQEVAD 60 MRA LVGLDFGK DFAASL+EL LL++SAGA+P++TITG+R+SPDAALFVG+GKA E+AD Sbjct: 1 MRAVLVGLDFGKGDFAASLEELSLLSRSAGADPIMTITGKRSSPDAALFVGSGKANEIAD 60 Query: 61 AVADLQLELVIFNHALSPAQQRNLERVLKVRVLDRTSLILDIFAQRAKSHEGKVQVELAQ 120 AV D +L++VIFNHALSPAQQRNLER LKVRV+DRTSLILDIFAQRA+SHEGKVQVELAQ Sbjct: 61 AVVDHELDIVIFNHALSPAQQRNLERHLKVRVVDRTSLILDIFAQRAQSHEGKVQVELAQ 120 Query: 121 LQHLATRLIRGWTHLERQKGGIGLRGPGETQLETDRRLLGERVKALRAVLAKLRRQHATQ 180 LQHLATRLIRGWTHLERQKGGIGLRGPGETQLETDRRLLG RVKALRA L KL +QHATQ Sbjct: 121 LQHLATRLIRGWTHLERQKGGIGLRGPGETQLETDRRLLGVRVKALRAKLDKLHKQHATQ 180 Query: 181 RRARGRSETFSVSLVGYTNAGKSTIFNSVAKAGVYAANQLFATLDTTSRRVYLGEVGHVV 240 RRARGR+ FSVSLVGYTNAGKST+FN++AK V AA+QLFATLDTTSRR+YLGE G+VV Sbjct: 181 RRARGRNNAFSVSLVGYTNAGKSTLFNALAKTRVLAADQLFATLDTTSRRIYLGEAGNVV 240 Query: 241 ISDTVGFIRELPHQLVEAFRATLEETIHADLLLHVVDAASPVRMEQIEQVNLVLKEIGAD 300 ISDTVGFIRELPHQLV AFRATLEETIHADLLLHVVD ASPVRMEQIEQVN+VL+EIGAD Sbjct: 241 ISDTVGFIRELPHQLVAAFRATLEETIHADLLLHVVDGASPVRMEQIEQVNMVLREIGAD 300 Query: 301 HVPQILVWNKIDAAGLEPTVEYDEYGKIQRVFVSAKSGAGLDLLREAIAASLKAALEARG 360 H+PQILVWNKIDAAGLEP +E DEY KI+RVF+SA++G+GLDLLREAIA A A G Sbjct: 301 HIPQILVWNKIDAAGLEPALERDEYDKIRRVFISAQTGSGLDLLREAIAEC--AQERAAG 358 Query: 361 RSRSQPVDSEDMH 373 V S+D++ Sbjct: 359 LEDVSEVASDDVN 371 >ref|ZP_08273694.1| GTP-binding protein HflX [Oxalobacteraceae bacterium IMCC9480] gb|EGF32838.1| GTP-binding protein HflX [Oxalobacteraceae bacterium IMCC9480] Length = 373 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 292/355 (82%), Positives = 322/355 (90%) Query: 1 MRAALVGLDFGKNDFAASLDELFLLAKSAGAEPVITITGRRASPDAALFVGTGKAQEVAD 60 MRAALVG+DFGK DF ASL+EL LLAKSAGA PV IT +R+SPDAA FVG+GKA E+ D Sbjct: 1 MRAALVGVDFGKGDFVASLEELALLAKSAGAIPVTRITCKRSSPDAAFFVGSGKASEIGD 60 Query: 61 AVADLQLELVIFNHALSPAQQRNLERVLKVRVLDRTSLILDIFAQRAKSHEGKVQVELAQ 120 AV D +LELVIFNHAL+PAQQRNLER +KVRV+DRTSLILDIFAQRA+SH GKVQVELAQ Sbjct: 61 AVIDDELELVIFNHALTPAQQRNLERHMKVRVIDRTSLILDIFAQRAQSHVGKVQVELAQ 120 Query: 121 LQHLATRLIRGWTHLERQKGGIGLRGPGETQLETDRRLLGERVKALRAVLAKLRRQHATQ 180 LQHLATRLIRGWTHLERQKGGIGLRGPGETQLETDRRLLGERVKALRA L KL++QHATQ Sbjct: 121 LQHLATRLIRGWTHLERQKGGIGLRGPGETQLETDRRLLGERVKALRAKLDKLQQQHATQ 180 Query: 181 RRARGRSETFSVSLVGYTNAGKSTIFNSVAKAGVYAANQLFATLDTTSRRVYLGEVGHVV 240 RRARGR + FSVSLVGYTNAGKST+FN++ KA VYAA+QLFATLDTTSRRVY+G+ G+VV Sbjct: 181 RRARGRGQVFSVSLVGYTNAGKSTLFNTMCKARVYAADQLFATLDTTSRRVYMGDAGNVV 240 Query: 241 ISDTVGFIRELPHQLVEAFRATLEETIHADLLLHVVDAASPVRMEQIEQVNLVLKEIGAD 300 +SDTVGFIRELPHQLV AFRATLEET+HADLLLHVVDAASP RMEQIEQVN VLKEIGAD Sbjct: 241 LSDTVGFIRELPHQLVAAFRATLEETVHADLLLHVVDAASPNRMEQIEQVNNVLKEIGAD 300 Query: 301 HVPQILVWNKIDAAGLEPTVEYDEYGKIQRVFVSAKSGAGLDLLREAIAASLKAA 355 H+PQILVWNKIDAAGLEP +E DEY KI+RVFVSA+SG G+DLLR AI K++ Sbjct: 301 HIPQILVWNKIDAAGLEPALERDEYDKIRRVFVSAQSGLGVDLLRSAIGEIAKSS 355 >emb|CAL61445.2| GTP-binding protein HflX [Herminiimonas arsenicoxydans] Length = 372 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 288/353 (81%), Positives = 323/353 (91%) Query: 1 MRAALVGLDFGKNDFAASLDELFLLAKSAGAEPVITITGRRASPDAALFVGTGKAQEVAD 60 MRA LVG+DFGK DFAASL+EL LL++SAGAEP++TITG+RASPDAALFVG+GKA EVAD Sbjct: 1 MRAVLVGVDFGKGDFAASLEELSLLSRSAGAEPIMTITGKRASPDAALFVGSGKANEVAD 60 Query: 61 AVADLQLELVIFNHALSPAQQRNLERVLKVRVLDRTSLILDIFAQRAKSHEGKVQVELAQ 120 A+ D ++++VIFNHALSPAQQRNLER LK+RV+DRTSLILDIFAQRA+SH GKVQVELAQ Sbjct: 61 AIVDHEIDIVIFNHALSPAQQRNLERHLKIRVVDRTSLILDIFAQRAQSHVGKVQVELAQ 120 Query: 121 LQHLATRLIRGWTHLERQKGGIGLRGPGETQLETDRRLLGERVKALRAVLAKLRRQHATQ 180 LQHL+TRLIRGWTHLERQKGGIGLRGPGETQLETDRRLLG RVKALRA L KL +QH TQ Sbjct: 121 LQHLSTRLIRGWTHLERQKGGIGLRGPGETQLETDRRLLGVRVKALRAKLEKLHKQHITQ 180 Query: 181 RRARGRSETFSVSLVGYTNAGKSTIFNSVAKAGVYAANQLFATLDTTSRRVYLGEVGHVV 240 RRARGR+ FSVSLVGYTNAGKST+FN++AK + AA+QLFATLDTTSRR+YLGE G+VV Sbjct: 181 RRARGRNNAFSVSLVGYTNAGKSTLFNALAKTKMLAADQLFATLDTTSRRIYLGEAGNVV 240 Query: 241 ISDTVGFIRELPHQLVEAFRATLEETIHADLLLHVVDAASPVRMEQIEQVNLVLKEIGAD 300 ISDTVGFIRELPHQLV AFRATLEETIHADLLLHVVD ASP RMEQIE+VN VL+EIGAD Sbjct: 241 ISDTVGFIRELPHQLVAAFRATLEETIHADLLLHVVDGASPARMEQIEEVNAVLREIGAD 300 Query: 301 HVPQILVWNKIDAAGLEPTVEYDEYGKIQRVFVSAKSGAGLDLLREAIAASLK 353 +PQILVWNKIDAAGLEP +E DEY KI+RVF+SA++G+GLDLLREAIA K Sbjct: 301 QIPQILVWNKIDAAGLEPALERDEYDKIRRVFISAQTGSGLDLLREAIAECAK 353