BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3454.p (297 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776341.1| HflC protein [Herbaspirillum seropedicae SmR... 523 e-146 ref|YP_001353809.1| inner membrane-anchored protein [Janthinobac... 438 e-121 ref|YP_004752578.1| HflC protein [Collimonas fungivorans Ter331]... 437 e-120 ref|YP_001099574.1| HflKC membrane-associated complex associates... 430 e-118 ref|ZP_08274391.1| HflC protein [Oxalobacteraceae bacterium IMCC... 428 e-118 >ref|YP_003776341.1| HflC protein [Herbaspirillum seropedicae SmR1] gb|ADJ64433.1| HflC protein [Herbaspirillum seropedicae SmR1] Length = 297 Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats. Identities = 286/297 (96%), Positives = 294/297 (98%) Query: 1 MGRLVTSVIVAVVAIWLASSTIFVVDQRSSAIVFALGEVKQVISEPGLHFKLPPPFQNVM 60 MGRLVTSVIVAVVAIWLASSTIFVVDQRSSAIVFALGEVKQVI+EPGLHFKLPPPFQNVM Sbjct: 1 MGRLVTSVIVAVVAIWLASSTIFVVDQRSSAIVFALGEVKQVITEPGLHFKLPPPFQNVM 60 Query: 61 YLDKRIQTLDTPDADRFITAEKMNVLVDAYVKWRIVDPRLYFVSFGADERRTQDRLSQIV 120 YLDKRIQTLDTPDADRFITAEKMNVLVDAYVKWRIVDPRLYFVSFGADERRTQDRLSQIV Sbjct: 61 YLDKRIQTLDTPDADRFITAEKMNVLVDAYVKWRIVDPRLYFVSFGADERRTQDRLSQIV 120 Query: 121 KAALNDEITKRTVREVISSQRNNVMDAIQARVANEAKQIGVEVIDVRLRRVDYVDQINNS 180 KAALNDEITKRTVREVISSQRNNVMDAIQARVANEAKQIGVEVIDVRLRRVDYVDQINNS Sbjct: 121 KAALNDEITKRTVREVISSQRNNVMDAIQARVANEAKQIGVEVIDVRLRRVDYVDQINNS 180 Query: 181 VFERMKSERVRVANELRSTGAAESEKIRADADRQRVVILAEAYRESEKIRGAGDAKASQI 240 VFERMKSERVRVANELRSTGAAESEKIRADADRQRVVILAEAYRESEKIRGAGD+KASQI Sbjct: 181 VFERMKSERVRVANELRSTGAAESEKIRADADRQRVVILAEAYRESEKIRGAGDSKASQI 240 Query: 241 YAQAFGQNPDFYKFYRSLEAYRASFKNRHDVMVLDPSSEFFKYFKGVGGGNTSAAKK 297 YAQAFGQNP+F+KFYRSLEAYRASFKNRHDVMV+DPSSEFFKYFKG+G G+ S +KK Sbjct: 241 YAQAFGQNPEFFKFYRSLEAYRASFKNRHDVMVVDPSSEFFKYFKGIGAGSASTSKK 297 >ref|YP_001353809.1| inner membrane-anchored protein [Janthinobacterium sp. Marseille] gb|ABR89010.1| inner membrane-anchored protein [Janthinobacterium sp. Marseille] Length = 296 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 232/296 (78%), Positives = 262/296 (88%) Query: 1 MGRLVTSVIVAVVAIWLASSTIFVVDQRSSAIVFALGEVKQVISEPGLHFKLPPPFQNVM 60 M RL++ VIVAV+A SST+FVVDQR AIVFALGEVK VISEPGLHFKLPPPFQNV+ Sbjct: 1 MNRLISYVIVAVIAFIALSSTLFVVDQRQYAIVFALGEVKTVISEPGLHFKLPPPFQNVV 60 Query: 61 YLDKRIQTLDTPDADRFITAEKMNVLVDAYVKWRIVDPRLYFVSFGADERRTQDRLSQIV 120 +LDKRI TLDTPDADRFITAEK N+LVDA+VKWRIVDPRLYFVSF DER Q+R++QIV Sbjct: 61 FLDKRILTLDTPDADRFITAEKKNILVDAFVKWRIVDPRLYFVSFSGDERSAQNRMAQIV 120 Query: 121 KAALNDEITKRTVREVISSQRNNVMDAIQARVANEAKQIGVEVIDVRLRRVDYVDQINNS 180 KA+LN+EITKRTVREVIS +R VMD IQ +V EAKQIGVE++DVRL+RVDYV+QINNS Sbjct: 121 KASLNEEITKRTVREVISGERGKVMDGIQKKVTEEAKQIGVEIVDVRLKRVDYVEQINNS 180 Query: 181 VFERMKSERVRVANELRSTGAAESEKIRADADRQRVVILAEAYRESEKIRGAGDAKASQI 240 VF+RMKSER RVANELRSTGAAESEKIRADADRQR VILAEAYR++E+IRG GDAKASQI Sbjct: 181 VFDRMKSERARVANELRSTGAAESEKIRADADRQRTVILAEAYRDAEQIRGEGDAKASQI 240 Query: 241 YAQAFGQNPDFYKFYRSLEAYRASFKNRHDVMVLDPSSEFFKYFKGVGGGNTSAAK 296 YAQAFGQ+P+FYKFYRSLEAYRASFK R+D++V+DP+SEFFKYFK G A K Sbjct: 241 YAQAFGQSPEFYKFYRSLEAYRASFKTRNDMLVIDPNSEFFKYFKNPGSTGAGAKK 296 >ref|YP_004752578.1| HflC protein [Collimonas fungivorans Ter331] gb|AEK61755.1| HflC protein [Collimonas fungivorans Ter331] Length = 298 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 221/285 (77%), Positives = 259/285 (90%) Query: 1 MGRLVTSVIVAVVAIWLASSTIFVVDQRSSAIVFALGEVKQVISEPGLHFKLPPPFQNVM 60 M RL++ +I A+WL STIFVVDQR AI+FA GEVKQVI++PGLHFKLPPPFQNV+ Sbjct: 1 MNRLISLLIFVFAALWLLFSTIFVVDQRQYAILFAFGEVKQVINQPGLHFKLPPPFQNVL 60 Query: 61 YLDKRIQTLDTPDADRFITAEKMNVLVDAYVKWRIVDPRLYFVSFGADERRTQDRLSQIV 120 +LDKRI T+D PD DRFITAEKMN+L+DA+VKWRI DP+LYFVSFG DE+R QDR+SQIV Sbjct: 61 FLDKRILTIDPPDTDRFITAEKMNILIDAFVKWRITDPKLYFVSFGGDEKRAQDRMSQIV 120 Query: 121 KAALNDEITKRTVREVISSQRNNVMDAIQARVANEAKQIGVEVIDVRLRRVDYVDQINNS 180 KAALNDEITKRTVREVIS QR VMD+I+++VA E+KQIGV++IDVRL+RVDYVDQIN S Sbjct: 121 KAALNDEITKRTVREVISGQRGKVMDSIRSKVAEESKQIGVDIIDVRLKRVDYVDQINAS 180 Query: 181 VFERMKSERVRVANELRSTGAAESEKIRADADRQRVVILAEAYRESEKIRGAGDAKASQI 240 V++RMKSER+RVANELRSTG+A+SEKIRADAD+QR VILAEAYR++EK+RG GDAKASQI Sbjct: 181 VYDRMKSERLRVANELRSTGSADSEKIRADADKQRTVILAEAYRDAEKMRGEGDAKASQI 240 Query: 241 YAQAFGQNPDFYKFYRSLEAYRASFKNRHDVMVLDPSSEFFKYFK 285 YAQAFGQNP+FYKFYRSLEAYRASFK R D+MV+DP+SEFFKYF+ Sbjct: 241 YAQAFGQNPEFYKFYRSLEAYRASFKTRQDLMVIDPNSEFFKYFR 285 >ref|YP_001099574.1| HflKC membrane-associated complex associates with HflK, part of modulator for protease specific for FtsH phage lambda cII repressor [Herminiimonas arsenicoxydans] emb|CAL61447.1| Protein HflC [Herminiimonas arsenicoxydans] Length = 296 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 227/296 (76%), Positives = 260/296 (87%) Query: 1 MGRLVTSVIVAVVAIWLASSTIFVVDQRSSAIVFALGEVKQVISEPGLHFKLPPPFQNVM 60 M RL++ VI +A + ST+FVVDQR AIVFALGEVK VI+EPGLHFKLPPPFQNV+ Sbjct: 1 MNRLISYVIALAIAAGIFFSTMFVVDQRQYAIVFALGEVKTVINEPGLHFKLPPPFQNVV 60 Query: 61 YLDKRIQTLDTPDADRFITAEKMNVLVDAYVKWRIVDPRLYFVSFGADERRTQDRLSQIV 120 +LDKRI TLDTPDADRFITAEK N+LVDA+VKWRIVDPRLYFVSF DER Q+R++QIV Sbjct: 61 FLDKRILTLDTPDADRFITAEKKNILVDAFVKWRIVDPRLYFVSFSGDERSAQNRMAQIV 120 Query: 121 KAALNDEITKRTVREVISSQRNNVMDAIQARVANEAKQIGVEVIDVRLRRVDYVDQINNS 180 KAALNDEITKRTVREVIS +R+ VMD IQ +V EAKQIGVE++DVRL+RVDYV+QIN S Sbjct: 121 KAALNDEITKRTVREVISGERSKVMDGIQKKVTEEAKQIGVEIVDVRLKRVDYVEQINAS 180 Query: 181 VFERMKSERVRVANELRSTGAAESEKIRADADRQRVVILAEAYRESEKIRGAGDAKASQI 240 VF+RMKSER RVANELRSTGAAESEKIRADADRQR VILAEAYR++E+IRG GDAKASQ+ Sbjct: 181 VFDRMKSERARVANELRSTGAAESEKIRADADRQRTVILAEAYRDAEQIRGEGDAKASQV 240 Query: 241 YAQAFGQNPDFYKFYRSLEAYRASFKNRHDVMVLDPSSEFFKYFKGVGGGNTSAAK 296 YAQAFGQNP+FYKFYRSLEAYR SFK R+D++V+DP+SEFFKYFK G+ +A K Sbjct: 241 YAQAFGQNPEFYKFYRSLEAYRGSFKTRNDMLVIDPNSEFFKYFKNPTTGSGAAKK 296 >ref|ZP_08274391.1| HflC protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32141.1| HflC protein [Oxalobacteraceae bacterium IMCC9480] Length = 296 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 222/296 (75%), Positives = 267/296 (90%) Query: 1 MGRLVTSVIVAVVAIWLASSTIFVVDQRSSAIVFALGEVKQVISEPGLHFKLPPPFQNVM 60 M R+V++V++A++A++L +S+IFVV+QR AIVFALGEVKQVISEPGLHFK+P PFQNV+ Sbjct: 1 MNRIVSAVVLALIALYLLTSSIFVVNQRQYAIVFALGEVKQVISEPGLHFKMPQPFQNVL 60 Query: 61 YLDKRIQTLDTPDADRFITAEKMNVLVDAYVKWRIVDPRLYFVSFGADERRTQDRLSQIV 120 +LDKRI TLDTPDADRFITAEK N+LVDA+VKWRI+ P LYFVSFG DERR DR++QIV Sbjct: 61 FLDKRILTLDTPDADRFITAEKKNILVDAFVKWRIIGPTLYFVSFGGDERRALDRMAQIV 120 Query: 121 KAALNDEITKRTVREVISSQRNNVMDAIQARVANEAKQIGVEVIDVRLRRVDYVDQINNS 180 KAALN+EITKRTVREVIS +R +VMDAIQ +VA+EAK+IGVE++DVRL+RVDYV+QIN S Sbjct: 121 KAALNEEITKRTVREVISGERGSVMDAIQKKVADEAKEIGVEIVDVRLKRVDYVEQINLS 180 Query: 181 VFERMKSERVRVANELRSTGAAESEKIRADADRQRVVILAEAYRESEKIRGAGDAKASQI 240 V+ERMK+ER RVANELRSTGAAESEKIRADADRQR V+LA+AYR++E +RG GDAKASQI Sbjct: 181 VYERMKAERTRVANELRSTGAAESEKIRADADRQRTVLLADAYRDAEMLRGEGDAKASQI 240 Query: 241 YAQAFGQNPDFYKFYRSLEAYRASFKNRHDVMVLDPSSEFFKYFKGVGGGNTSAAK 296 YA+AFG++P+FYKFYRSLEAYR+SFK+R D+MV+DPSSEFFKYFK G S K Sbjct: 241 YAEAFGKSPEFYKFYRSLEAYRSSFKSRSDLMVVDPSSEFFKYFKAPGATAASPKK 296