BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3446.p (393 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776337.1| transmembrane efflux transmembrane protein [... 553 e-155 ref|YP_001633133.1| putative transmembrane efflux protein of the... 433 e-119 ref|NP_879170.1| transporter [Bordetella pertussis Tohama I] >gi... 408 e-112 ref|YP_001856654.1| major facilitator transporter [Burkholderia ... 377 e-102 ref|YP_001523200.1| transmembrane efflux protein [Azorhizobium c... 360 3e-97 >ref|YP_003776337.1| transmembrane efflux transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64429.1| transmembrane efflux transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 395 Score = 553 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 365/379 (96%), Positives = 372/379 (98%) Query: 1 MPIALWALTISAFAIGTTEFVIMGLLPEVATNLGVSLSSAGLLVTGYALGVFVGAPLVTA 60 MPIALWALTISAFAIGTTEFVIMGLLPEVA NLGVSLSSAGLLVTGYALGVFVGAPL+TA Sbjct: 1 MPIALWALTISAFAIGTTEFVIMGLLPEVAANLGVSLSSAGLLVTGYALGVFVGAPLLTA 60 Query: 61 TTGRLPRKTLLIALMVVFVIGNLACAIAPGYVTLMIGRVVASFAHGAFFGVGSVVATSLV 120 TTGRLPRKTLL+ALMVVFV+GNLACAIAP Y TLMIGRVVASFAHGAFFGVGSVVATSLV Sbjct: 61 TTGRLPRKTLLVALMVVFVVGNLACAIAPDYTTLMIGRVVASFAHGAFFGVGSVVATSLV 120 Query: 121 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQSYGWRATFWAVTVIGVIALAATAVLVPR 180 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQSYGWRATFWAVTVIGVIALAATAVLVPR Sbjct: 121 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQSYGWRATFWAVTVIGVIALAATAVLVPR 180 Query: 181 SQGGEEADFGKEVRVLMRPQVMLGLLMTVLGFGGVFAAFTYIAPILTDISGFPASAVSPI 240 SQGGEE DFGKEVRVLMRPQVMLGLLMTVLGFGGVFAAFTYIAPILTD+SGFPASAVSPI Sbjct: 181 SQGGEETDFGKEVRVLMRPQVMLGLLMTVLGFGGVFAAFTYIAPILTDLSGFPASAVSPI 240 Query: 241 LLLFGLGLVIGNLAGGKLADRKLMATLLGSLVLLAVVLVLFGLTNENKIAAIIGVGLMGM 300 LLLFGLGLVIGNLAGGKLAD+KLMATLLGSLVLLA VLVLFGLT +NK+AAIIGVGLMGM Sbjct: 241 LLLFGLGLVIGNLAGGKLADKKLMATLLGSLVLLAAVLVLFGLTVDNKVAAIIGVGLMGM 300 Query: 301 AAFATVPPLQMRVLEKATGAPNLASSANIAAFNLGNAAGAWLGGVTIDHGPGLHAVPYVA 360 AAFATVPPLQMRVLEKATGAPNLASSANIAAFNLGNAAGAWLGGVTIDHGPGLHAVPYVA Sbjct: 301 AAFATVPPLQMRVLEKATGAPNLASSANIAAFNLGNAAGAWLGGVTIDHGPGLHAVPYVA 360 Query: 361 ALLPLAGIAVALVSWKMDA 379 ALLPLAGI VALVSWKMDA Sbjct: 361 ALLPLAGIVVALVSWKMDA 379 >ref|YP_001633133.1| putative transmembrane efflux protein of the MFS type [Bordetella petrii DSM 12804] emb|CAP44866.1| putative Transmembrane efflux protein of the MFS type [Bordetella petrii] Length = 387 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 284/387 (73%), Positives = 321/387 (82%) Query: 1 MPIALWALTISAFAIGTTEFVIMGLLPEVATNLGVSLSSAGLLVTGYALGVFVGAPLVTA 60 MPIALWAL + AF IGTTEFVIMGLLPEV +LGVSLSSAGLLVTGYALGV VGAP V Sbjct: 1 MPIALWALAVGAFGIGTTEFVIMGLLPEVGADLGVSLSSAGLLVTGYALGVVVGAPPVAI 60 Query: 61 TTGRLPRKTLLIALMVVFVIGNLACAIAPGYVTLMIGRVVASFAHGAFFGVGSVVATSLV 120 T R+PRKTLL+ALMV+F +GNLACA+APGY TLM RV+ S AHGAFFGVGSVVATSLV Sbjct: 61 LTTRMPRKTLLLALMVIFTLGNLACALAPGYGTLMAARVLTSLAHGAFFGVGSVVATSLV 120 Query: 121 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQSYGWRATFWAVTVIGVIALAATAVLVPR 180 EKQASAIALMFTGLT+ANVLGVPFGTWLGQ++GWRATFWAVTV+G++A+ A A VPR Sbjct: 121 KPEKQASAIALMFTGLTLANVLGVPFGTWLGQAWGWRATFWAVTVVGIVAMLAIATWVPR 180 Query: 181 SQGGEEADFGKEVRVLMRPQVMLGLLMTVLGFGGVFAAFTYIAPILTDISGFPASAVSPI 240 S+G D E+R L RPQV+LG MTVLGFGGVF AFTYIAP+LT+++GF AVSPI Sbjct: 181 SRGDRGGDLMGELRALSRPQVLLGFAMTVLGFGGVFTAFTYIAPLLTELAGFSPGAVSPI 240 Query: 241 LLLFGLGLVIGNLAGGKLADRKLMATLLGSLVLLAVVLVLFGLTNENKIAAIIGVGLMGM 300 LLLFG+GLV GN GGKLADR+LM TL+GSL LLA+VL +F LT + AA+ V ++G Sbjct: 241 LLLFGVGLVAGNTYGGKLADRRLMPTLVGSLALLAIVLAVFSLTVHAQFAAVATVAVLGA 300 Query: 301 AAFATVPPLQMRVLEKATGAPNLASSANIAAFNLGNAAGAWLGGVTIDHGPGLHAVPYVA 360 AAFATVPPLQMRVLEKA APNLAS+ NIAAFNLGNAAGAWLGG+TIDHGPGL A P VA Sbjct: 301 AAFATVPPLQMRVLEKAGDAPNLASAFNIAAFNLGNAAGAWLGGLTIDHGPGLAATPLVA 360 Query: 361 ALLPLAGIAVALVSWKMDARPAALARA 387 A + +G+AVAL SWK+D RP ALA A Sbjct: 361 AAVTASGLAVALYSWKLDMRPRALATA 387 >ref|NP_879170.1| transporter [Bordetella pertussis Tohama I] emb|CAE40669.1| probable transporter [Bordetella pertussis Tohama I] gb|AEE65734.1| transporter [Bordetella pertussis CS] Length = 400 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 272/387 (70%), Positives = 309/387 (79%) Query: 1 MPIALWALTISAFAIGTTEFVIMGLLPEVATNLGVSLSSAGLLVTGYALGVFVGAPLVTA 60 MPIALWAL AF IGTTEFVIMGLLPEV +LGVS+ AGLLVTGYALGV VGAP V Sbjct: 1 MPIALWALAAGAFGIGTTEFVIMGLLPEVGADLGVSIPQAGLLVTGYALGVVVGAPPVAI 60 Query: 61 TTGRLPRKTLLIALMVVFVIGNLACAIAPGYVTLMIGRVVASFAHGAFFGVGSVVATSLV 120 T RLPRKTLL+ LM++F +GNLACA+APGY LM RV+ S AHGAFFGVGSVVATSLV Sbjct: 61 LTARLPRKTLLLGLMLIFTLGNLACALAPGYGALMAARVLTSLAHGAFFGVGSVVATSLV 120 Query: 121 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQSYGWRATFWAVTVIGVIALAATAVLVPR 180 +KQASAIALMFTGLT+ANVLGVPFGTWLGQ++GWRATFWAVT +G+ A+AA VP Sbjct: 121 RPDKQASAIALMFTGLTLANVLGVPFGTWLGQAWGWRATFWAVTAVGIAAMAAIMYWVPA 180 Query: 181 SQGGEEADFGKEVRVLMRPQVMLGLLMTVLGFGGVFAAFTYIAPILTDISGFPASAVSPI 240 S+G +AD E+R L RPQV+LG MTVLGFGGVF FTYIAPILT +SG A+AVSPI Sbjct: 181 SRGQHQADLAGELRALARPQVLLGFAMTVLGFGGVFTTFTYIAPILTGVSGIAAAAVSPI 240 Query: 241 LLLFGLGLVIGNLAGGKLADRKLMATLLGSLVLLAVVLVLFGLTNENKIAAIIGVGLMGM 300 LLLFG+GLV GN GG+LADR+LM TL+GSL +LA VL F T + IAA+ V L+G Sbjct: 241 LLLFGVGLVAGNTLGGRLADRRLMPTLVGSLAVLAAVLAAFAWTAHHSIAAVATVALLGA 300 Query: 301 AAFATVPPLQMRVLEKATGAPNLASSANIAAFNLGNAAGAWLGGVTIDHGPGLHAVPYVA 360 AAFATVPPLQMRVL++A GAPNLAS+ NIAAFNLGNAAGAWLGG+TIDHGPGL A P VA Sbjct: 301 AAFATVPPLQMRVLQQAGGAPNLASAFNIAAFNLGNAAGAWLGGLTIDHGPGLAATPLVA 360 Query: 361 ALLPLAGIAVALVSWKMDARPAALARA 387 A + G+A+AL+SW D R A RA Sbjct: 361 AAVTGGGLALALLSWSRDRRNDANQRA 387 >ref|YP_001856654.1| major facilitator transporter [Burkholderia phymatum STM815] gb|ACC69608.1| major facilitator superfamily MFS_1 [Burkholderia phymatum STM815] Length = 392 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 246/385 (63%), Positives = 294/385 (76%), Gaps = 1/385 (0%) Query: 1 MPIALWALTISAFAIGTTEFVIMGLLPEVATNLGVSLSSAGLLVTGYALGVFVGAPLVTA 60 MPI L AL ISAFAIGTTEFVIMGLLPEVA +L VSL SAGLLV+GYALGV VGAPL+ Sbjct: 1 MPIPLLALAISAFAIGTTEFVIMGLLPEVAKDLAVSLPSAGLLVSGYALGVAVGAPLLAV 60 Query: 61 TTGRLPRKTLLIALMVVFVIGNLACAIAPGYVTLMIGRVVASFAHGAFFGVGSVVATSLV 120 T R+PRK L LM VF++GNL CAIA Y LMI RVV SFAHG+FFG+G+VVA SLV Sbjct: 61 VTSRMPRKLALQLLMGVFIVGNLLCAIASDYSVLMIARVVTSFAHGSFFGIGAVVAASLV 120 Query: 121 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQSYGWRATFWAVTVIGVIALAATAVLVPR 180 P+EK+ASAIALMFTGLT+ANVLGVPFGT++GQ +GWR FW V GV++LA LVP Sbjct: 121 PQEKRASAIALMFTGLTLANVLGVPFGTFIGQQFGWRVAFWIVAAFGVMSLAGVTALVPN 180 Query: 181 SQGGEEADFGKEVRVLMRPQVMLGLLMTVLGFGGVFAAFTYIAPILTDISGFPASAVSPI 240 A G EVRVL PQV L L MTVLGFGGVF FTYIAPIL + GF V+ I Sbjct: 181 RHDTGPAGLGHEVRVLKEPQVWLALTMTVLGFGGVFVVFTYIAPILEQVGGFTPHGVTLI 240 Query: 241 LLLFGLGLVIGNLAGGKLADRKLMATLLGSLVLLAVVLVLFGLTNENKIAAIIGVGLMGM 300 L+LFG+GL +GN GGKLADR LM +L+G L+ LAVV+ +F T+ +++AA + V + G+ Sbjct: 241 LVLFGVGLTVGNTVGGKLADRSLMPSLMGILIALAVVMAVFAHTSHSQVAAAVTVFIWGI 300 Query: 301 AAFATVPPLQMRVLEKATGAPNLASSANIAAFNLGNAAGAWLGGVTIDHGPGLHAVPYVA 360 AAFATVPPLQMRV+EKA APNLAS+ NI AFN+GNA GAWLGG+ I HG GL A+PYVA Sbjct: 301 AAFATVPPLQMRVVEKAKAAPNLASTLNIGAFNVGNAGGAWLGGLAISHGYGLDALPYVA 360 Query: 361 ALLPLAGIAVALVSWKMDARPAALA 385 A++ LA + + ++ ++DA PAA+A Sbjct: 361 AVVALAALGLTWIAARLDA-PAAIA 384 >ref|YP_001523200.1| transmembrane efflux protein [Azorhizobium caulinodans ORS 571] dbj|BAF86282.1| transmembrane efflux protein [Azorhizobium caulinodans ORS 571] Length = 419 Score = 360 bits (923), Expect = 3e-97, Method: Composition-based stats. Identities = 250/381 (65%), Positives = 299/381 (78%), Gaps = 2/381 (0%) Query: 1 MPIALWALTISAFAIGTTEFVIMGLLPEVATNLGVSLSSAGLLVTGYALGVFVGAPLVTA 60 MP+AL+AL AF IG TEFVIMGLL +V +LGVSLS+AGLL++GYALGV VGAP++T Sbjct: 29 MPVALYALAAGAFGIGVTEFVIMGLLLDVGADLGVSLSAAGLLISGYALGVVVGAPVLTI 88 Query: 61 TTGRLPRKTLLIALMVVFVIGNLACAIAPGYVTLMIGRVVASFAHGAFFGVGSVVATSLV 120 T R PRK +L+ LM VF +GNLACA+AP Y LM RV+ +FAH FFGVGSVVAT LV Sbjct: 89 LTARWPRKAVLLGLMAVFTLGNLACALAPDYELLMAARVLTAFAHATFFGVGSVVATGLV 148 Query: 121 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQSYGWRATFWAVTVIGVIALAATAVLVPR 180 P K+ASAIA+MFTGLTVAN+LGVPFGTWLGQ YGWR+TFWAVT++GV+A A A+LVP Sbjct: 149 PANKKASAIAIMFTGLTVANILGVPFGTWLGQHYGWRSTFWAVTLVGVLAFAVIALLVPA 208 Query: 181 SQGGEEA-DFGKEVRVLMRPQVMLGLLMTVLGFGGVFAAFTYIAPILTDISGFPASAVSP 239 + EA + K++ VL R ++LGLL TVL + GVFAAFTYIAP+LT I+GF SAVSP Sbjct: 209 NAAKPEASNLKKDLAVLTRAPLLLGLLTTVLSWVGVFAAFTYIAPMLTKITGFAESAVSP 268 Query: 240 ILLLFGLGLVIGNLAGGKLADRKLMATLLGSLVLLAVVLVLFGLTNENKIAAIIGVGLMG 299 ILL+FG GLV+GNLAGG+LADR L+ T+ GSLV+LA VL N +AA+I VGL+G Sbjct: 269 ILLVFGAGLVVGNLAGGRLADRWLVPTVYGSLVVLAAVLGALTFALHNAVAAVIFVGLLG 328 Query: 300 MAAFATVPPLQMRVLEKATGA-PNLASSANIAAFNLGNAAGAWLGGVTIDHGPGLHAVPY 358 AFATV PLQM VLEKA GA +LASS NIAAFNLGNA GAWLGGV IDHG GL AVP+ Sbjct: 329 AVAFATVAPLQMWVLEKAQGAGQSLASSFNIAAFNLGNAIGAWLGGVVIDHGLGLGAVPW 388 Query: 359 VAALLPLAGIAVALVSWKMDA 379 VAAL+PLA + VA + +++A Sbjct: 389 VAALVPLAAVPVAWWAGRLEA 409