BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3414.p (309 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776320.1| uroporphyrinogen-III synthase [Herbaspirillu... 327 1e-87 ref|YP_004752066.1| uroporphyrinogen III synthase [Collimonas fu... 249 5e-64 ref|YP_001352833.1| uroporphyrinogen-III synthase [Janthinobacte... 222 5e-56 ref|YP_001099317.1| uroporphyrinogen III synthase [Herminiimonas... 214 1e-53 ref|ZP_08273543.1| uroporphyrinogen III synthase [Oxalobacterace... 201 9e-50 >ref|YP_003776320.1| uroporphyrinogen-III synthase [Herbaspirillum seropedicae SmR1] gb|ADJ64412.1| uroporphyrinogen-III synthase protein [Herbaspirillum seropedicae SmR1] Length = 269 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 201/258 (77%), Positives = 215/258 (83%), Gaps = 3/258 (1%) Query: 45 MPLRPETAAPLPVVVTRPLQQAGGFAERVQQLGRRAVVFPLLAIGPVEDDSELKATLARL 104 MP PE+ A LPVVVTRP QQA FA VQ LGR AVVFPLL I VED + L+A LARL Sbjct: 1 MPPLPESGAALPVVVTRPRQQAHAFAASVQALGRPAVVFPLLEISAVEDVATLQAMLARL 60 Query: 105 HDFALVVFVSPNAIDAAFAHLQG---WPRNVPIGIVGEGSRVALRGHGVDGANATIYGPQ 161 +FALVVFVSPNAIDAAFA L WP V IGIVGEGSR+ALR HGVD A AT+YGPQ Sbjct: 61 EEFALVVFVSPNAIDAAFAQLPAGRPWPAKVAIGIVGEGSRLALRAHGVDAACATLYGPQ 120 Query: 162 RADKMDSEELFKSLPLEQLRGRRALIVRGQAGRDFLSEALQQQGVEIEFLTAYRRLAPEL 221 RADKMDSEEL KSLPL QLRG+RALIVRGQ+GRDFLSEALQQQGV +E+LTAYRR AP L Sbjct: 121 RADKMDSEELLKSLPLAQLRGQRALIVRGQSGRDFLSEALQQQGVTVEYLTAYRRTAPRL 180 Query: 222 NPQSRLQLLDLLDGGADWVITSSEALRNLLHLARLAGGEERVVKLQRQRIVVSHHRIAET 281 + Q+ LLDLLDGGADWVITSSEALRNL+ L RLAGGEERVVKLQRQRI VSHHRIAET Sbjct: 181 DAQNGPLLLDLLDGGADWVITSSEALRNLVDLTRLAGGEERVVKLQRQRIFVSHHRIAET 240 Query: 282 AREQGFVQVVLTGSGDER 299 AREQGF +VVLTGSGDER Sbjct: 241 AREQGFERVVLTGSGDER 258 >ref|YP_004752066.1| uroporphyrinogen III synthase [Collimonas fungivorans Ter331] gb|AEK61243.1| uroporphyrinogen III synthase [Collimonas fungivorans Ter331] Length = 271 Score = 249 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 141/266 (53%), Positives = 185/266 (69%), Gaps = 2/266 (0%) Query: 44 LMPLRPET--AAPLPVVVTRPLQQAGGFAERVQQLGRRAVVFPLLAIGPVEDDSELKATL 101 L+PL P +A PV++TRPLQQA A ++ GR+ VVFPLL I P+ D++ L+A L Sbjct: 5 LVPLAPPAGNSALRPVIITRPLQQASALARQIAARGRQPVVFPLLEILPLNDNAPLQAVL 64 Query: 102 ARLHDFALVVFVSPNAIDAAFAHLQGWPRNVPIGIVGEGSRVALRGHGVDGANATIYGPQ 161 L DFALVVFVSPNAIDAAF H+ GWPR +PIGIVGEGSR AL HG+ N TI+ P Sbjct: 65 GELADFALVVFVSPNAIDAAFRHIAGWPRQLPIGIVGEGSRAALARHGLTAHNTTIFSPP 124 Query: 162 RADKMDSEELFKSLPLEQLRGRRALIVRGQAGRDFLSEALQQQGVEIEFLTAYRRLAPEL 221 + DSE L ++L L+ LRGR+ L+VRG++GR+F +++L G++++ + AYRR AP L Sbjct: 125 DPARTDSEGLLQALDLDSLRGRQVLLVRGESGREFFADSLLAAGIKVQAVAAYRRQAPVL 184 Query: 222 NPQSRLQLLDLLDGGADWVITSSEALRNLLHLARLAGGEERVVKLQRQRIVVSHHRIAET 281 + R +L LLD DW++TSSEALR+L+ L + G V K+Q+Q+++V H RIAET Sbjct: 185 DASLRTRLQFLLDTENDWILTSSEALRHLVDLVQALAGGAGVAKIQQQKLLVPHARIAET 244 Query: 282 AREQGFVQVVLTGSGDERLLAALVPP 307 A GF V LTGSGDERLL AL P Sbjct: 245 AHTLGFTDVTLTGSGDERLLDALQFP 270 >ref|YP_001352833.1| uroporphyrinogen-III synthase [Janthinobacterium sp. Marseille] gb|ABR90255.1| uroporphyrinogen-III synthase [Janthinobacterium sp. Marseille] Length = 256 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 124/248 (50%), Positives = 161/248 (64%) Query: 57 VVVTRPLQQAGGFAERVQQLGRRAVVFPLLAIGPVEDDSELKATLARLHDFALVVFVSPN 116 VV+TRPL QA A+RV +LGR+AV+FPLL I P++D L+ L L +AL+ FVSPN Sbjct: 5 VVITRPLAQADALAQRVTELGRKAVIFPLLEILPLDDQQSLRQALRELDQYALIAFVSPN 64 Query: 117 AIDAAFAHLQGWPRNVPIGIVGEGSRVALRGHGVDGANATIYGPQRADKMDSEELFKSLP 176 AIDAAF WP +P+ +VGEGSR+AL HG N+TI P ++ DS+ L L Sbjct: 65 AIDAAFNARPDWPWQIPLAVVGEGSRMALLRHGATTGNSTIISPTDLERTDSQTLLAELD 124 Query: 177 LEQLRGRRALIVRGQAGRDFLSEALQQQGVEIEFLTAYRRLAPELNPQSRLQLLDLLDGG 236 L LRG++ LI+RG+ GR+ L + L+ GV + L AYRR+APELN R +L LL Sbjct: 125 LPVLRGKQVLIIRGETGRELLGDTLRAAGVGVTPLAAYRRVAPELNNARRGELKRLLSCQ 184 Query: 237 ADWVITSSEALRNLLHLARLAGGEERVVKLQRQRIVVSHHRIAETAREQGFVQVVLTGSG 296 DW++TSSE LR L + V K+Q+QRI+VSH RIAETA+ GF + LT SG Sbjct: 185 NDWIVTSSEGLRFLTEMVAQLDEAGSVAKMQQQRIIVSHVRIAETAQLLGFSNITLTRSG 244 Query: 297 DERLLAAL 304 D+ LLAAL Sbjct: 245 DDGLLAAL 252 >ref|YP_001099317.1| uroporphyrinogen III synthase [Herminiimonas arsenicoxydans] emb|CAL61190.1| uroporphyrinogen III synthase (UROS) (Uroporphyrinogen-III cosynthetase) (Hydroxymethylbilane hydrolyase [cyclizing]) [Herminiimonas arsenicoxydans] Length = 260 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 128/248 (51%), Positives = 163/248 (65%) Query: 57 VVVTRPLQQAGGFAERVQQLGRRAVVFPLLAIGPVEDDSELKATLARLHDFALVVFVSPN 116 VV+TRPL QA G A RV LGR+A VFPLL I P+ D + L+ L L +AL+ FVSPN Sbjct: 9 VVITRPLAQAEGLARRVTALGRKATVFPLLDILPLADQASLQQALRDLSGYALIAFVSPN 68 Query: 117 AIDAAFAHLQGWPRNVPIGIVGEGSRVALRGHGVDGANATIYGPQRADKMDSEELFKSLP 176 AIDAA A WPR++P+ +VGEGSR+AL HG+ N+TI P D+ DSE L L Sbjct: 69 AIDAALAARADWPRDIPMAVVGEGSRLALARHGLTAENSTIISPTDLDRTDSETLLAELD 128 Query: 177 LEQLRGRRALIVRGQAGRDFLSEALQQQGVEIEFLTAYRRLAPELNPQSRLQLLDLLDGG 236 L LR ++ LIVRG+ GR LSEAL+ G ++ L AYRR+AP + R +L LL G Sbjct: 129 LPALRNKQILIVRGETGRPLLSEALRAAGAQVTLLAAYRRVAPVFDATRRRELKRLLHGQ 188 Query: 237 ADWVITSSEALRNLLHLARLAGGEERVVKLQRQRIVVSHHRIAETAREQGFVQVVLTGSG 296 DW++TSSEALR L+ + E V K+Q+QRI+VSH RI ETA+ GF + +T SG Sbjct: 189 NDWIVTSSEALRFLMQMVAQLDEAEGVAKMQQQRIIVSHIRIGETAQLLGFSNITVTRSG 248 Query: 297 DERLLAAL 304 D+ LLAAL Sbjct: 249 DDGLLAAL 256 >ref|ZP_08273543.1| uroporphyrinogen III synthase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32979.1| uroporphyrinogen III synthase [Oxalobacteraceae bacterium IMCC9480] Length = 256 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 124/249 (49%), Positives = 164/249 (65%) Query: 56 PVVVTRPLQQAGGFAERVQQLGRRAVVFPLLAIGPVEDDSELKATLARLHDFALVVFVSP 115 P+V+TRPL Q+ A++++ R V+ PLL I P+ D S L+A LA+L FALV FVSP Sbjct: 4 PLVITRPLAQSLALAQQLRDGDRELVILPLLEILPLPDTSALQAVLAQLESFALVAFVSP 63 Query: 116 NAIDAAFAHLQGWPRNVPIGIVGEGSRVALRGHGVDGANATIYGPQRADKMDSEELFKSL 175 NAIDA FA L WP +VP+ ++GEGSR AL HGV I P + DS+ L ++L Sbjct: 64 NAIDATFAQLACWPPSVPLAVMGEGSRRALARHGVAAGLYQITSPLDTQRTDSQTLLEAL 123 Query: 176 PLEQLRGRRALIVRGQAGRDFLSEALQQQGVEIEFLTAYRRLAPELNPQSRLQLLDLLDG 235 L +L+GR+ LIVRG++GR+ L++AL+ G+ ++ + AYRR AP L+ R +L DLL Sbjct: 124 DLSRLQGRQVLIVRGESGRELLADALRDAGISVQQVAAYRRAAPLLDDALRQRLTDLLAQ 183 Query: 236 GADWVITSSEALRNLLHLARLAGGEERVVKLQRQRIVVSHHRIAETAREQGFVQVVLTGS 295 DWVITSSEAL+ L+H + E V K+QR ++ V H RIAETA GF V LTGS Sbjct: 184 EGDWVITSSEALQVLMHFVQQVDAESGVDKIQRMKLFVPHRRIAETALSLGFRSVCLTGS 243 Query: 296 GDERLLAAL 304 GDE LL AL Sbjct: 244 GDEGLLTAL 252