BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3409.p (480 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776315.1| hypothetical protein Hsero_2918 [Herbaspiril... 282 9e-74 ref|ZP_03698636.1| putative lipoprotein [Lutiella nitroferrum 20... 180 5e-43 ref|YP_004847251.1| hypothetical protein NH8B_2022 [Pseudogulben... 179 7e-43 ref|YP_001981808.1| putative lipoprotein [Cellvibrio japonicus U... 177 4e-42 ref|YP_001861994.1| hypothetical protein Bphy_5884 [Burkholderia... 176 7e-42 >ref|YP_003776315.1| hypothetical protein Hsero_2918 [Herbaspirillum seropedicae SmR1] gb|ADJ64407.1| exported protein [Herbaspirillum seropedicae SmR1] Length = 511 Score = 282 bits (722), Expect = 9e-74, Method: Composition-based stats. Identities = 237/360 (65%), Positives = 267/360 (74%), Gaps = 23/360 (6%) Query: 1 MLAPVALYPDSLLAQVLMASTYPLEVVQAARFVDSRPGLQGDALARSIAPMPWDPSVKAL 60 MLAPVALYPDSLLAQVLMASTYPLEVVQA RF+++RPGLQGD LAR++APMPWDPSVKAL Sbjct: 43 MLAPVALYPDSLLAQVLMASTYPLEVVQAQRFIEARPGLQGDGLARAVAPMPWDPSVKAL 102 Query: 61 VQFPSVLAMMNDKLDWTQRLGDAFLSQQANVMDTVQNLRVKAQIAGNLQSSNQQRIVQQE 120 VQFPSVLAMMND+LDW Q+LG AFL QQ VMDTVQNLR +A+IAG L+SS QQR+V Q+ Sbjct: 103 VQFPSVLAMMNDRLDWMQQLGQAFLGQQPAVMDTVQNLRERARIAGTLESSPQQRVVVQD 162 Query: 121 QIIVIEPVNPQVIYVPYYNPTVVYGGWWWPQRPPVYWAPPPRYRPPSYN--VSIGISFGA 178 I I PVNPQV+YVPYYNP VVYG WWWP PPV WAPPPRYRPPSYN S ISF Sbjct: 163 DFIEIVPVNPQVVYVPYYNPVVVYGDWWWPSAPPVVWAPPPRYRPPSYNPGFSASISFST 222 Query: 179 GTGIVRSVYSDARPDWRQRQVMVTQTRINNVTNVTNVNNVNNTNVINNRYVNNNINVNRN 238 G G++ +V+ +ARPDWR+RQVMVTQTRI NV N+ N N N +NRN Sbjct: 223 GIGVMSAVFGEARPDWRERQVMVTQTRITNVNNINNNVVNNRIVNNNVT-------INRN 275 Query: 239 VSMNQRPVVWHHDPRYAGGR-YAQQPAPALAPPPGQRPLAGPQAQNLVQAQHVPQWNGHG 297 V++NQRPVVWHH+ RY GR PA A P P PQA A +P W HG Sbjct: 276 VTVNQRPVVWHHEGRYGAGRAVPPPPALAAQAAPRPSPQGQPQA-----AAGMPSWRDHG 330 Query: 298 PQPQAGQPFPANTPRPLPVADNVQQRLAQQDQFRQRQAIDQQRQREQQANDQQRQREQMI 357 PQP RPLPVADN QQR+AQQDQ RQRQA++QQRQREQQANDQQRQREQ++ Sbjct: 331 PQP--------GPARPLPVADNPQQRIAQQDQMRQRQAVEQQRQREQQANDQQRQREQIV 382 >ref|ZP_03698636.1| putative lipoprotein [Lutiella nitroferrum 2002] gb|EEG08630.1| putative lipoprotein [Lutiella nitroferrum 2002] Length = 497 Score = 180 bits (456), Expect = 5e-43, Method: Composition-based stats. Identities = 124/307 (40%), Positives = 164/307 (53%), Gaps = 30/307 (9%) Query: 1 MLAPVALYPDSLLAQVLMASTYPLEVVQAARFVDSRPGLQGDALARSIAPMPWDPSVKAL 60 MLAP+ALYPDSLL QVLMASTYPLEVV+AAR+ PGL+GD R WDPSV +L Sbjct: 44 MLAPIALYPDSLLTQVLMASTYPLEVVEAARWSRDHPGLKGDQAVREANRNDWDPSVLSL 103 Query: 61 VQFPSVLAMMNDKLDWTQRLGDAFLSQQANVMDTVQNLRVKAQIAGNLQSSNQQRIVQQE 120 + FP VL MM++ LDWT++LGDAFL+Q+ VMDTVQ LR KA G+L+S+ R+ ++ Sbjct: 104 LAFPQVLQMMDEHLDWTEQLGDAFLAQEDQVMDTVQRLRDKAWEQGSLRSNRYLRVAREH 163 Query: 121 QIIVIEPVNPQVIYVPYYNPTVVYGGWWWPQRPPVYWAPPPRYRPPSYNVSIGISFGAGT 180 +IVIEP +P+++YVPYY+P VVYG WWWP PP YW P Y P+ + G G Sbjct: 164 TVIVIEPADPEIVYVPYYDPLVVYGAWWWPGYPPYYWIWPGYYVGPTVGIYWGTGITVGV 223 Query: 181 GIVRSVYSDARPDWRQRQVMVTQTRINNVTNVTNVNNVNNTNVINNRYVNNNINVNRNVS 240 G + DW +R V + +NN Y ++ +R Sbjct: 224 GFFFGNF-----DWPRRHVTIVN--------------------VNNYYFRPHV-THREWL 257 Query: 241 MNQRPVVWHHDPRYAGGRYAQQPAPALAPPPGQRPLAGPQAQNLVQAQHVPQWNGHGPQP 300 + P W HDP R P P P +R + + + Q P P+P Sbjct: 258 DRKGPFRWEHDP----SRRGNVPYHGFTPRPPERVAPSGEPRQFPRQQAQPTSPALQPKP 313 Query: 301 QAGQPFP 307 + P Sbjct: 314 DLRRDMP 320 >ref|YP_004847251.1| hypothetical protein NH8B_2022 [Pseudogulbenkiania sp. NH8B] dbj|BAK76837.1| protein of unknown function [Pseudogulbenkiania sp. NH8B] Length = 497 Score = 179 bits (455), Expect = 7e-43, Method: Composition-based stats. Identities = 124/307 (40%), Positives = 164/307 (53%), Gaps = 30/307 (9%) Query: 1 MLAPVALYPDSLLAQVLMASTYPLEVVQAARFVDSRPGLQGDALARSIAPMPWDPSVKAL 60 MLAP+ALYPDSLL QVLMASTYPLEVV+AAR+ PGL+GD R WDPSV +L Sbjct: 44 MLAPIALYPDSLLTQVLMASTYPLEVVEAARWSRDHPGLKGDQAVREANRNDWDPSVLSL 103 Query: 61 VQFPSVLAMMNDKLDWTQRLGDAFLSQQANVMDTVQNLRVKAQIAGNLQSSNQQRIVQQE 120 + FP VL MM++ LDWT++LGDAFL+Q+ VMDTVQ LR KA G+L+S+ R+ ++ Sbjct: 104 LAFPQVLQMMDEHLDWTEQLGDAFLAQEDQVMDTVQRLRDKAWEQGSLRSNRYLRVAREH 163 Query: 121 QIIVIEPVNPQVIYVPYYNPTVVYGGWWWPQRPPVYWAPPPRYRPPSYNVSIGISFGAGT 180 +IVIEP +P+++YVPYY+P VVYG WWWP PP YW P Y P+ + G G Sbjct: 164 TVIVIEPADPEIVYVPYYDPLVVYGAWWWPGYPPYYWIWPGYYVGPTVGIYWGTGITVGV 223 Query: 181 GIVRSVYSDARPDWRQRQVMVTQTRINNVTNVTNVNNVNNTNVINNRYVNNNINVNRNVS 240 G + DW +R V + +NN Y ++ +R Sbjct: 224 GFFFGNF-----DWPRRHVTIVN--------------------VNNYYFRPHV-THREWL 257 Query: 241 MNQRPVVWHHDPRYAGGRYAQQPAPALAPPPGQRPLAGPQAQNLVQAQHVPQWNGHGPQP 300 + P W HDP R P P P +R + + + Q P P+P Sbjct: 258 DRKGPFRWEHDP----SRRGNVPYHGFTPRPPERVAPSGEPRQFPRQQTQPTSPALQPKP 313 Query: 301 QAGQPFP 307 + P Sbjct: 314 DLRRDMP 320 >ref|YP_001981808.1| putative lipoprotein [Cellvibrio japonicus Ueda107] gb|ACE83228.1| putative lipoprotein [Cellvibrio japonicus Ueda107] Length = 508 Score = 177 bits (449), Expect = 4e-42, Method: Composition-based stats. Identities = 147/480 (30%), Positives = 231/480 (48%), Gaps = 44/480 (9%) Query: 1 MLAPVALYPDSLLAQVLMASTYPLEVVQAARFVDSRPGLQGDALARSIAPMPWDPSVKAL 60 +LAP+ALYPD+LL+ +L+ASTYPLEV+QA R+V + L GDA+ ++ WDPSVKAL Sbjct: 47 LLAPIALYPDTLLSHILIASTYPLEVIQADRWVRNNKQLSGDAVVNAVEQQDWDPSVKAL 106 Query: 61 VQFPSVLAMMNDKLDWTQRLGDAFLSQQANVMDTVQNLRVKAQIAGNLQSSNQQRIVQQE 120 V FP VL M++ LDWTQ+LGDAFL+ +A +MD++Q LR KA +GNL ++V++E Sbjct: 107 VAFPDVLKRMSEDLDWTQQLGDAFLADEARIMDSIQGLRNKAYASGNLDKMEHVKVVREE 166 Query: 121 QIIVIEPVNPQVIYVPYYNPTVVYGGWWWPQRPPVYWAPPPRYRPPSYNVSIGISFGAGT 180 ++I +EP +V+YVP Y+ VVYG WWWP PPVYW + P +Y G +G Sbjct: 167 RVITLEPTVERVVYVPVYDTRVVYGSWWWPDYPPVYW-----HYPSNYVYVSGFYWGPRV 221 Query: 181 GIVRSVYSDARPDWRQRQVMVTQTRINNVTNVTNVNNVNNTNVINNRYVNNNINVNRNVS 240 I S + WR R+V+ VI+ Y ++ NR++ Sbjct: 222 YIGSSFFFSG-CHWRDRRVV----------------------VIDRHYHSHRFYNNRSIV 258 Query: 241 MNQRPVVWHHDPRYAGGRYAQQPAPALAPPPGQRPLAGPQAQNLVQAQHVPQWNGHGPQP 300 + WHH+P + G + P QA + + Q+ QP Sbjct: 259 HYRNSRHWHHNPVHRRGVAYYDNHTRERFHSAREPY---QASRVYRTQYA--------QP 307 Query: 301 QAGQPFPANTPRPLPVADNVQQRLAQQDQFRQRQAIDQQRQREQQANDQQRQ-----REQ 355 GQ N RPL + + + Q + R + QA + QR R + Sbjct: 308 TTGQRPHDNLNRPLTRPTDSLRAGSSPTQPGGDRVSGGGRVQNGQATETQRHAPNVNRVE 367 Query: 356 MIRDQQHQRDQQAQEQRQQQQAQERQWQQRQQQVQQQQQRQQQMQQQQLQQQQREQQMRQ 415 +R++ + QQ ++ Q+Q + +Q+ QR+ + + R Sbjct: 368 QLRERMNNSAQQWRDNNPQRQVNRNNSASERAPAEQRLQRESNRETTTYRTGNITPTPRD 427 Query: 416 HQQQEQQRQQQMMNQQREQQHRQMEQARQQQQQHQAAQHEQQARQQQAQQRDAHQRREDR 475 + ++ QQ +R Q+ + EQ R ++ + + +QQ ++ Q+ R+ DR Sbjct: 428 NSSGYRRDIQQPQRIERTQERVEREQPRIERTPERIDRSQQQRVERTYQRESPTPRQFDR 487 >ref|YP_001861994.1| hypothetical protein Bphy_5884 [Burkholderia phymatum STM815] gb|ACC74948.1| conserved hypothetical protein [Burkholderia phymatum STM815] Length = 466 Score = 176 bits (446), Expect = 7e-42, Method: Composition-based stats. Identities = 93/157 (59%), Positives = 117/157 (74%), Gaps = 10/157 (6%) Query: 1 MLAPVALYPDSLLAQVLMASTYPLEVVQAARFVDSRPGLQGDALARSIAPMPWDPSVKAL 60 ++AP+ALYPDS+LAQVLMASTYPLE+V AAR+V + P ++GDA +++A PWD SVK++ Sbjct: 85 LVAPIALYPDSVLAQVLMASTYPLEIVHAARWVKANPNVKGDAAVQAVADQPWDTSVKSM 144 Query: 61 VQFPSVLAMMNDKLDWTQRLGDAFLSQQANVMDTVQNLRVKAQIAGNLQSSNQQRIVQQ- 119 V FP +L M+DKLDWTQRLGDAFL+QQ V D VQ LR +AQ +GNL S+ QQ ++ + Sbjct: 145 VAFPQILEPMSDKLDWTQRLGDAFLAQQKEVFDAVQRLRSRAQESGNLTSNEQQNVIVEP 204 Query: 120 ---------EQIIVIEPVNPQVIYVPYYNPTVVYGGW 147 I+ IEP NPQVIYVP YNPTVVYG W Sbjct: 205 APAGSQAGTSTIVRIEPANPQVIYVPAYNPTVVYGAW 241