BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3399.p (463 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776296.1| high affinity nitrate/nitrite transporter tr... 710 0.0 emb|CBJ40899.1| nitrate transporter; Major facilitator superfami... 573 e-161 ref|NP_522784.1| high affinity nitrate transporter transmembrane... 572 e-161 ref|YP_004750827.1| nitrate/nitrite transporter [Collimonas fung... 570 e-160 ref|YP_003748519.1| nitrate transporter; Major facilitator super... 561 e-157 >ref|YP_003776296.1| high affinity nitrate/nitrite transporter transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64388.1| high affinity nitrate/nitrite transporter transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 435 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 420/435 (96%), Positives = 429/435 (98%) Query: 29 MSKSNRIALFSLGTPQMRAFHLTWMAFFVCFFAWFACAPLMPVIKGEFHLTPGQIANINI 88 MSK+NRI LFSL +PQMRAFHLTWMAFFVCFFAWFACAPLMPVIKGEFHLTPGQIANINI Sbjct: 1 MSKANRIELFSLRSPQMRAFHLTWMAFFVCFFAWFACAPLMPVIKGEFHLTPGQIANINI 60 Query: 89 AAVAVTILVRLIIGPMCDRFGPRKAYTGLLLAGAVPVIGVAFAQSYESFLFFRLLIGAVG 148 AAVAVTILVRLIIGPMCDRFGPRK YTGLLLAGAVPVIGVAFAQSYESFLFFRLLIGAVG Sbjct: 61 AAVAVTILVRLIIGPMCDRFGPRKTYTGLLLAGAVPVIGVAFAQSYESFLFFRLLIGAVG 120 Query: 149 ASFVITQYHTSVMFAPNVVGTANAATAGWGNAGGGVAQGVMPLLMAAMLMLGVSQGWGWR 208 ASFVITQYHTSVMFAPNVVGTANAATAGWGNAGGGVAQGVMPLLMAA+LMLGVSQGWGWR Sbjct: 121 ASFVITQYHTSVMFAPNVVGTANAATAGWGNAGGGVAQGVMPLLMAALLMLGVSQGWGWR 180 Query: 209 AALLVPGVLMLVMAALYWRFTQDCPEGNYDALRAAGVTIESGKRGGWASFRAAAANYRVW 268 AALLVPGVLMLVMAALYWRFTQDCPEGNYDALRAAGVTIESGKRGGWASFRAAAANYRVW Sbjct: 181 AALLVPGVLMLVMAALYWRFTQDCPEGNYDALRAAGVTIESGKRGGWASFRAAAANYRVW 240 Query: 269 MLFITYGACFGVEIFIHNIAAIYYVDHFQLSLESAGIAAASFGLLALFARALGGYISDKV 328 MLFITYGACFGVEIFIHNIAAIYYV+HF+LSLESAGIAAASFGLLALFARALGG+ISDKV Sbjct: 241 MLFITYGACFGVEIFIHNIAAIYYVEHFKLSLESAGIAAASFGLLALFARALGGFISDKV 300 Query: 329 ALRGGLNRRATLLFVMMLGEGLGLLWFAHAGSVVAAVVAMLCFGLFTHMACGATYALVPF 388 AL GGLNRRATLLFVMMLGEGLGLLWFAHAGSVVAAV+AMLCFGLFTHMACGATYALVPF Sbjct: 301 ALAGGLNRRATLLFVMMLGEGLGLLWFAHAGSVVAAVIAMLCFGLFTHMACGATYALVPF 360 Query: 389 IDRKALGGVAGIIGAGGNVGAVAAGFLMKGLGNTQQTLSMLGVLVTISALCAVAIRFTAS 448 IDRKALGGVAGIIGAGGNVGAV AGFLMKGLGNTQQTLSMLGVLVTISALCAVAIRFTAS Sbjct: 361 IDRKALGGVAGIIGAGGNVGAVLAGFLMKGLGNTQQTLSMLGVLVTISALCAVAIRFTAS 420 Query: 449 DKSGDAALADSKVAA 463 DKSG+A LAD+KVAA Sbjct: 421 DKSGEAVLADNKVAA 435 >emb|CBJ40899.1| nitrate transporter; Major facilitator superfamily MFS_1 [Ralstonia solanacearum CMR15] Length = 441 Score = 573 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 345/433 (79%), Positives = 390/433 (90%) Query: 31 KSNRIALFSLGTPQMRAFHLTWMAFFVCFFAWFACAPLMPVIKGEFHLTPGQIANINIAA 90 K+ RI LFSL TPQMRAFHLTW+AFFVCF+AWFACAPLMPV+KGEFHLTPGQIANINIAA Sbjct: 4 KATRIDLFSLRTPQMRAFHLTWLAFFVCFYAWFACAPLMPVLKGEFHLTPGQIANINIAA 63 Query: 91 VAVTILVRLIIGPMCDRFGPRKAYTGLLLAGAVPVIGVAFAQSYESFLFFRLLIGAVGAS 150 VAVTILVRL++GP+CDRFGPRK YTGLL+ GAVPV+GVA AQSYE+FLFFRL IGA+GAS Sbjct: 64 VAVTILVRLLVGPLCDRFGPRKTYTGLLVLGAVPVLGVALAQSYEAFLFFRLAIGAIGAS 123 Query: 151 FVITQYHTSVMFAPNVVGTANAATAGWGNAGGGVAQGVMPLLMAAMLMLGVSQGWGWRAA 210 FVITQYHTSVMFAPNVVGTANAA AGWGNAGGGVAQG MPLL+ A++M+GV+QG GWR A Sbjct: 124 FVITQYHTSVMFAPNVVGTANAAAAGWGNAGGGVAQGTMPLLLTAIVMMGVTQGMGWRLA 183 Query: 211 LLVPGVLMLVMAALYWRFTQDCPEGNYDALRAAGVTIESGKRGGWASFRAAAANYRVWML 270 ++VPGV ML++AALYWR+TQDCPEGN+D LRAAG TIESGK+GGW SF AA NYRVW+L Sbjct: 184 MVVPGVAMLIVAALYWRYTQDCPEGNFDDLRAAGKTIESGKKGGWGSFVTAAGNYRVWLL 243 Query: 271 FITYGACFGVEIFIHNIAAIYYVDHFQLSLESAGIAAASFGLLALFARALGGYISDKVAL 330 F+TYGACFGVEIFIHNIAA YYVDHF LSL +AG+AAASFGLLALFARALGG +SD+VA Sbjct: 244 FVTYGACFGVEIFIHNIAATYYVDHFGLSLSAAGMAAASFGLLALFARALGGIVSDRVAR 303 Query: 331 RGGLNRRATLLFVMMLGEGLGLLWFAHAGSVVAAVVAMLCFGLFTHMACGATYALVPFID 390 GL+ R LL V+M+GEGLGLL FAHAG+ AV+AML FGLFTHMACGATYALVPFID Sbjct: 304 SRGLDARTLLLCVLMVGEGLGLLGFAHAGTASLAVLAMLGFGLFTHMACGATYALVPFID 363 Query: 391 RKALGGVAGIIGAGGNVGAVAAGFLMKGLGNTQQTLSMLGVLVTISALCAVAIRFTASDK 450 R+ALGGVAGIIGAGGNVGAVAAGFLMKGLG+ QQTLS+LGV+V +SA+CAVA+RFTA K Sbjct: 364 RRALGGVAGIIGAGGNVGAVAAGFLMKGLGDAQQTLSVLGVMVMLSAICAVAVRFTAEHK 423 Query: 451 SGDAALADSKVAA 463 + + AL D+ +AA Sbjct: 424 AREQALYDNTLAA 436 >ref|NP_522784.1| high affinity nitrate transporter transmembrane protein [Ralstonia solanacearum GMI1000] emb|CAD18374.1| probable high affinity nitrate transporter transmembrane protein [Ralstonia solanacearum GMI1000] Length = 441 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 345/433 (79%), Positives = 389/433 (89%) Query: 31 KSNRIALFSLGTPQMRAFHLTWMAFFVCFFAWFACAPLMPVIKGEFHLTPGQIANINIAA 90 K+ RI LFSL TPQMRAFHLTW+AFFVCF+AWFACAPLMPV+KGEFHLTPGQIANINIAA Sbjct: 4 KATRIDLFSLRTPQMRAFHLTWLAFFVCFYAWFACAPLMPVLKGEFHLTPGQIANINIAA 63 Query: 91 VAVTILVRLIIGPMCDRFGPRKAYTGLLLAGAVPVIGVAFAQSYESFLFFRLLIGAVGAS 150 VAVTILVRLI+GP+CDRFGPRK YTGLL+ GAVPV+GVA AQSYE+FLFFRL IGA+GAS Sbjct: 64 VAVTILVRLIVGPLCDRFGPRKTYTGLLVLGAVPVLGVALAQSYEAFLFFRLAIGAIGAS 123 Query: 151 FVITQYHTSVMFAPNVVGTANAATAGWGNAGGGVAQGVMPLLMAAMLMLGVSQGWGWRAA 210 FVITQYHTSVMFAPNVVGTANAA AGWGNAGGGVAQG MPLL+ A++MLGV+QG GWR A Sbjct: 124 FVITQYHTSVMFAPNVVGTANAAAAGWGNAGGGVAQGTMPLLLTAIVMLGVTQGMGWRLA 183 Query: 211 LLVPGVLMLVMAALYWRFTQDCPEGNYDALRAAGVTIESGKRGGWASFRAAAANYRVWML 270 ++VPGV ML++A LYWR+TQDCPEGN+D LRAAG TIE GK+GGW SF AA NYRVW+L Sbjct: 184 MVVPGVAMLIVAVLYWRYTQDCPEGNFDDLRAAGKTIEGGKKGGWGSFVTAAGNYRVWLL 243 Query: 271 FITYGACFGVEIFIHNIAAIYYVDHFQLSLESAGIAAASFGLLALFARALGGYISDKVAL 330 F+TYGACFGVEIFIHNIAAIYYVDHF LSL +AG+AAASFGLLALFARALGG +SD+VA Sbjct: 244 FVTYGACFGVEIFIHNIAAIYYVDHFGLSLSAAGMAAASFGLLALFARALGGIVSDRVAR 303 Query: 331 RGGLNRRATLLFVMMLGEGLGLLWFAHAGSVVAAVVAMLCFGLFTHMACGATYALVPFID 390 GL+ R LL V+M+GEGLGLL FAHAG+ AV+AML FGLFTHMACGATYALVPFID Sbjct: 304 SRGLDARTLLLCVLMVGEGLGLLGFAHAGTASLAVLAMLGFGLFTHMACGATYALVPFID 363 Query: 391 RKALGGVAGIIGAGGNVGAVAAGFLMKGLGNTQQTLSMLGVLVTISALCAVAIRFTASDK 450 R+ALGGVAGIIGAGGNVGAVAAGFLMKGLG+ QQTLS+LGV+V +SA+CAVA+RF+A K Sbjct: 364 RRALGGVAGIIGAGGNVGAVAAGFLMKGLGDAQQTLSVLGVMVMLSAICAVAVRFSAEHK 423 Query: 451 SGDAALADSKVAA 463 + + AL D+ +AA Sbjct: 424 AREQALYDNTLAA 436 >ref|YP_004750827.1| nitrate/nitrite transporter [Collimonas fungivorans Ter331] gb|AEK60004.1| Nitrate/nitrite transporter [Collimonas fungivorans Ter331] Length = 439 Score = 570 bits (1470), Expect = e-160, Method: Composition-based stats. Identities = 351/433 (81%), Positives = 386/433 (89%) Query: 30 SKSNRIALFSLGTPQMRAFHLTWMAFFVCFFAWFACAPLMPVIKGEFHLTPGQIANINIA 89 +K+ I LFSL TPQMRAFHLTWMAFFVCFFAWFACAPLMP+IKG+ L+ QIANINIA Sbjct: 3 NKATSIQLFSLRTPQMRAFHLTWMAFFVCFFAWFACAPLMPLIKGQLGLSMAQIANINIA 62 Query: 90 AVAVTILVRLIIGPMCDRFGPRKAYTGLLLAGAVPVIGVAFAQSYESFLFFRLLIGAVGA 149 AVAVTILVRL++GP+CDR+GPRK YTGLLL GA+PV GVA QSYESFLFFRL IGAVGA Sbjct: 63 AVAVTILVRLLVGPLCDRYGPRKTYTGLLLIGALPVFGVAMVQSYESFLFFRLCIGAVGA 122 Query: 150 SFVITQYHTSVMFAPNVVGTANAATAGWGNAGGGVAQGVMPLLMAAMLMLGVSQGWGWRA 209 SFVITQYHTSVMFA NVVGTANAA+AGWGNAGGG AQ +MPLL A+LMLGVS+ GWR Sbjct: 123 SFVITQYHTSVMFASNVVGTANAASAGWGNAGGGAAQALMPLLATALLMLGVSETLGWRL 182 Query: 210 ALLVPGVLMLVMAALYWRFTQDCPEGNYDALRAAGVTIESGKRGGWASFRAAAANYRVWM 269 ALLVPGV ML+MAALYWR+TQDCP+GNY LRA GV IE GK+GGWASFRAA+ANYRVW+ Sbjct: 183 ALLVPGVFMLIMAALYWRYTQDCPQGNYADLRARGVAIEGGKKGGWASFRAASANYRVWL 242 Query: 270 LFITYGACFGVEIFIHNIAAIYYVDHFQLSLESAGIAAASFGLLALFARALGGYISDKVA 329 LF+TYGACFGVEIFIHNIAAIYYVDHF LSL+ AG+AAASFGLLALFARALGG++SDK A Sbjct: 243 LFVTYGACFGVEIFIHNIAAIYYVDHFGLSLKGAGMAAASFGLLALFARALGGWLSDKAA 302 Query: 330 LRGGLNRRATLLFVMMLGEGLGLLWFAHAGSVVAAVVAMLCFGLFTHMACGATYALVPFI 389 LRG L+ RA LLFV+MLGEGLGLLWFAHAGSV AVVAML FGLFTHMACGATYALVPFI Sbjct: 303 LRGNLDSRAALLFVLMLGEGLGLLWFAHAGSVALAVVAMLTFGLFTHMACGATYALVPFI 362 Query: 390 DRKALGGVAGIIGAGGNVGAVAAGFLMKGLGNTQQTLSMLGVLVTISALCAVAIRFTASD 449 DRKALGGVAGIIGAGGNVGAVAAGFLMKGLG+TQQTL+MLG LVTISALCA+A+RF+ Sbjct: 363 DRKALGGVAGIIGAGGNVGAVAAGFLMKGLGDTQQTLTMLGALVTISALCAIAVRFSPEH 422 Query: 450 KSGDAALADSKVA 462 K+ + L D +A Sbjct: 423 KAQEQELHDLALA 435 >ref|YP_003748519.1| nitrate transporter; Major facilitator superfamily MFS_1 [Ralstonia solanacearum CFBP2957] emb|CBJ54133.1| nitrate transporter; Major facilitator superfamily MFS_1 [Ralstonia solanacearum CFBP2957] Length = 441 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 349/433 (80%), Positives = 391/433 (90%) Query: 31 KSNRIALFSLGTPQMRAFHLTWMAFFVCFFAWFACAPLMPVIKGEFHLTPGQIANINIAA 90 K+ RI LFSL TPQMRAFHLTW+AFFVCF+AWFACAPLMPV+KGEFHLTPGQIANINIAA Sbjct: 4 KATRIDLFSLRTPQMRAFHLTWLAFFVCFYAWFACAPLMPVLKGEFHLTPGQIANINIAA 63 Query: 91 VAVTILVRLIIGPMCDRFGPRKAYTGLLLAGAVPVIGVAFAQSYESFLFFRLLIGAVGAS 150 VAVTILVRLI+GP+CDRFGPRK YTGLL+ GAVPV+GVA AQSYE+FLFFRL IGA+GAS Sbjct: 64 VAVTILVRLIVGPLCDRFGPRKTYTGLLVIGAVPVLGVALAQSYEAFLFFRLAIGAIGAS 123 Query: 151 FVITQYHTSVMFAPNVVGTANAATAGWGNAGGGVAQGVMPLLMAAMLMLGVSQGWGWRAA 210 FVITQYHTSVMFAPNVVGTANAA AGWGNAGGGVAQG MPLL+ A++MLGV+QG GWR A Sbjct: 124 FVITQYHTSVMFAPNVVGTANAAAAGWGNAGGGVAQGTMPLLLTAIVMLGVTQGLGWRIA 183 Query: 211 LLVPGVLMLVMAALYWRFTQDCPEGNYDALRAAGVTIESGKRGGWASFRAAAANYRVWML 270 ++VPGV ML++AALYWR+TQDCPEGN+D LRAAG TIESGK+GGW SF AA NYRVW+L Sbjct: 184 MVVPGVAMLIVAALYWRYTQDCPEGNFDDLRAAGKTIESGKKGGWGSFVTAAGNYRVWLL 243 Query: 271 FITYGACFGVEIFIHNIAAIYYVDHFQLSLESAGIAAASFGLLALFARALGGYISDKVAL 330 F+TYGACFGVEIFIHNIAA YYVD F LSL +AG+AAASFGLLALFARALGG +SD+VA Sbjct: 244 FVTYGACFGVEIFIHNIAATYYVDRFGLSLSAAGMAAASFGLLALFARALGGIVSDRVAR 303 Query: 331 RGGLNRRATLLFVMMLGEGLGLLWFAHAGSVVAAVVAMLCFGLFTHMACGATYALVPFID 390 R GL+ RA LL V+MLGEGLGLL F+HAG+ AV+AML FGLFTHMACGATYALVPFID Sbjct: 304 RRGLDARAQLLCVLMLGEGLGLLGFSHAGTASMAVLAMLGFGLFTHMACGATYALVPFID 363 Query: 391 RKALGGVAGIIGAGGNVGAVAAGFLMKGLGNTQQTLSMLGVLVTISALCAVAIRFTASDK 450 R+ALGGVAGIIGAGGNVGAVAAGFLMKGLG+ QQTLS+LGVLV +SALCAVA+RF+A K Sbjct: 364 RRALGGVAGIIGAGGNVGAVAAGFLMKGLGDAQQTLSVLGVLVGLSALCAVAVRFSAEHK 423 Query: 451 SGDAALADSKVAA 463 + + AL D+ +AA Sbjct: 424 AREQALYDNTLAA 436