BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3394.p (184 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776291.1| phospholipid-binding protein [Herbaspirillum... 262 2e-68 ref|YP_004352146.1| kinase inhibitor [Pseudomonas brassicacearum... 229 1e-58 ref|NP_902827.1| kinase inhibitor [Chromobacterium violaceum ATC... 217 7e-55 ref|ZP_04637655.1| hypothetical protein yinte0001_21550 [Yersini... 215 2e-54 ref|ZP_02903310.1| putative phosphatidylethanolamine-binding pro... 213 9e-54 >ref|YP_003776291.1| phospholipid-binding protein [Herbaspirillum seropedicae SmR1] gb|ADJ64383.1| phospholipid-binding protein [Herbaspirillum seropedicae SmR1] Length = 192 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 140/186 (75%), Positives = 159/186 (85%), Gaps = 2/186 (1%) Query: 1 MSFFRFSVATLALTFSALS--AHAADFTVTSRDIQDGKALSNAEVFNGFGCSGLNRSPQL 58 M+ R ++A ALTFSAL+ A AA+FT+TS DI +G++LS A+VFNGFGC GLN+SPQL Sbjct: 1 MTLIRPTLAAAALTFSALTLPAQAAEFTLTSSDIAEGQSLSIAQVFNGFGCIGLNKSPQL 60 Query: 59 SWSNAPAGTKSFAVTVYDPDAPTGSGWWHWTVFNLPASVRSLPGGINAQGQGLPAGAIQG 118 SWS APA TKSFA+TVYDPDAPTGSGWWHWTVFN+PASVRSLP G A G+GLPAG+IQG Sbjct: 61 SWSGAPADTKSFAITVYDPDAPTGSGWWHWTVFNIPASVRSLPAGATAPGKGLPAGSIQG 120 Query: 119 RTDFGSSGYGGACPPAGDKPHRYQFVIWALNTEKLPLDAQASGAMLGFFLNGAALGQARL 178 RTDFGSSG+GGACPP GDKPHRYQFV+WAL TE LPLDAQASGAMLGF+LN AL A+L Sbjct: 121 RTDFGSSGFGGACPPEGDKPHRYQFVVWALKTETLPLDAQASGAMLGFYLNAQALATAKL 180 Query: 179 TATYGR 184 TA Y R Sbjct: 181 TAVYER 186 >ref|YP_004352146.1| kinase inhibitor [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA67142.1| Putative kinase inhibitor; putative exported protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 179 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 116/167 (69%), Positives = 133/167 (79%), Gaps = 3/167 (1%) Query: 18 LSAHAADFTVTSRDIQDGKALSNAEVFNGFGCSGLNRSPQLSWSNAPAGTKSFAVTVYDP 77 S HAADF++TS+DI D + L+ EVF GFGC G N SPQLSW NAP GTKS+A+TVYDP Sbjct: 16 FSGHAADFSLTSQDIADNRPLTRREVFQGFGCEGGNTSPQLSWINAPTGTKSYAITVYDP 75 Query: 78 DAPTGSGWWHWTVFNLPASVRSLPGGINAQGQGLPAGAIQGRTDFGSSGYGGACPPAGDK 137 DAPTGSGWWHWTVFNLPASV SLP G G LPAGA+QGRTDFG S +GGACPP GDK Sbjct: 76 DAPTGSGWWHWTVFNLPASVHSLPRG---AGPSLPAGAVQGRTDFGQSEFGGACPPVGDK 132 Query: 138 PHRYQFVIWALNTEKLPLDAQASGAMLGFFLNGAALGQARLTATYGR 184 PHRYQF +WAL +KL LD QASGA++G+ LN AL +A +T+TYGR Sbjct: 133 PHRYQFTVWALKVDKLALDNQASGALVGYMLNANALAKATITSTYGR 179 >ref|NP_902827.1| kinase inhibitor [Chromobacterium violaceum ATCC 12472] gb|AAQ60824.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 181 Score = 217 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 112/160 (70%), Positives = 129/160 (80%) Query: 25 FTVTSRDIQDGKALSNAEVFNGFGCSGLNRSPQLSWSNAPAGTKSFAVTVYDPDAPTGSG 84 F ++S + DGK LS +V+ GFGC G N SPQLSWS AP GTKSFA+T YDPDAPTGSG Sbjct: 22 FRLSSDSMADGKPLSLKQVYRGFGCEGGNVSPQLSWSGAPLGTKSFAITAYDPDAPTGSG 81 Query: 85 WWHWTVFNLPASVRSLPGGINAQGQGLPAGAIQGRTDFGSSGYGGACPPAGDKPHRYQFV 144 WWHWTV NLPASV SLP G +QG LP GA+QGRTD+G S +GGACPPAGDKPHRYQF Sbjct: 82 WWHWTVANLPASVHSLPEGAGSQGGSLPPGAVQGRTDYGESRFGGACPPAGDKPHRYQFT 141 Query: 145 IWALNTEKLPLDAQASGAMLGFFLNGAALGQARLTATYGR 184 +WAL +KLP+DA ASGA++GF LN ALG+A+LTATYGR Sbjct: 142 VWALKIDKLPIDANASGALVGFMLNANALGKAQLTATYGR 181 >ref|ZP_04637655.1| hypothetical protein yinte0001_21550 [Yersinia intermedia ATCC 29909] gb|EEQ18205.1| hypothetical protein yinte0001_21550 [Yersinia intermedia ATCC 29909] Length = 182 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 109/176 (61%), Positives = 131/176 (74%), Gaps = 1/176 (0%) Query: 10 TLALTFSALSAHAADFTVTSRDIQDGKALSNAEVFNGFGCSGLNRSPQLSWSNAPAGTKS 69 +LA+ +LSA A F+V S D+ +GK L +VFNGFGC G N+SPQLSW APAGTKS Sbjct: 7 SLAIIAVSLSAQAQTFSVKSSDMSEGKPLQTQQVFNGFGCEGGNQSPQLSWQGAPAGTKS 66 Query: 70 FAVTVYDPDAPTGSGWWHWTVFNLPASVRSLPGGINAQGQG-LPAGAIQGRTDFGSSGYG 128 FA+T YDPDAPTGSGWWHWTV N+PA V SL G LP GA+QGR DFG +G+G Sbjct: 67 FAITAYDPDAPTGSGWWHWTVVNIPADVHSLATNAGQSKNGTLPVGAVQGRNDFGYAGFG 126 Query: 129 GACPPAGDKPHRYQFVIWALNTEKLPLDAQASGAMLGFFLNGAALGQARLTATYGR 184 GACPP GDKPHRYQF +WAL T+KLPL++ ASGA++GF LN + +A+L ATY R Sbjct: 127 GACPPVGDKPHRYQFTVWALKTDKLPLNSDASGALVGFMLNSNVISKAQLVATYSR 182 >ref|ZP_02903310.1| putative phosphatidylethanolamine-binding protein [Escherichia albertii TW07627] gb|EDS91336.1| putative phosphatidylethanolamine-binding protein [Escherichia albertii TW07627] Length = 183 Score = 213 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 106/176 (60%), Positives = 131/176 (74%), Gaps = 1/176 (0%) Query: 8 VATLALTFSALSAHAADFTVTSRDIQDGKALSNAEVFNGFGCSGLNRSPQLSWSNAPAGT 67 + + L SA AA F VTS +I++G++LS A VF+GFGC G N SP LSWS AP GT Sbjct: 5 IVSSVLALITFSAQAAPFQVTSSEIKNGESLSKAHVFSGFGCEGENISPSLSWSGAPQGT 64 Query: 68 KSFAVTVYDPDAPTGSGWWHWTVFNLPASVRSLPGGINAQ-GQGLPAGAIQGRTDFGSSG 126 KSFAVTVYDPDAPTGSGWWHWTV N+PA+V SLP + G LPAGA+QGR DFG +G Sbjct: 65 KSFAVTVYDPDAPTGSGWWHWTVVNIPATVTSLPVDAGRRDGTKLPAGAVQGRNDFGYAG 124 Query: 127 YGGACPPAGDKPHRYQFVIWALNTEKLPLDAQASGAMLGFFLNGAALGQARLTATY 182 +GGACPPAGDKPH YQF +WAL T+K+P+D+ +SGA++G+ LN + A +T Y Sbjct: 125 FGGACPPAGDKPHHYQFKVWALKTDKIPVDSHSSGALVGYMLNANKIATAEITPVY 180