BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3385.p         (165 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003746986.1| hypothetical protein RCFBP_21229 [Ralstonia ...   122   2e-26
ref|YP_003167411.1| prevent-host-death family protein [Candidatu...   120   7e-26
ref|YP_316036.1| prevent-host-death protein [Thiobacillus denitr...   120   9e-26
emb|CBJ39430.1| conserved protein of unknown function; putative ...   120   9e-26
ref|NP_518385.1| hypothetical protein RSc0264 [Ralstonia solanac...   119   1e-25

>ref|YP_003746986.1| hypothetical protein RCFBP_21229 [Ralstonia solanacearum CFBP2957]
 emb|CBJ44404.1| conserved protein of unknown function; putative prevent-host-death
           family protein [Ralstonia solanacearum CFBP2957]
          Length = 98

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 66/97 (68%), Positives = 80/97 (82%)

Query: 66  MAFSSTDVITLTQARAQLSELADQVKAGTEKIITKNGVSYVALIDAERLDYYHQLEREHL 125
           MAFS+ D+I L+QARA LSELA+QVKAG EKI+TKNG SY+ALIDA+RLDYYH+LER H+
Sbjct: 1   MAFSARDIIPLSQARANLSELAEQVKAGAEKIVTKNGESYIALIDAQRLDYYHELERAHI 60

Query: 126 HLLTIEDARAGLADVAAGHVDDARTALNGLKRRRTAK 162
           HLL +++A  GLADV  G V DAR AL  LK RR++K
Sbjct: 61  HLLVLDEASKGLADVEVGRVKDARRALGALKHRRSSK 97


>ref|YP_003167411.1| prevent-host-death family protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gb|ACV35482.1| prevent-host-death family protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 96

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 64/96 (66%), Positives = 76/96 (79%)

Query: 66  MAFSSTDVITLTQARAQLSELADQVKAGTEKIITKNGVSYVALIDAERLDYYHQLEREHL 125
           M  S++DVI L+ ARA  SELAD+VK G EKIITKNG SY+ALIDA RLDYYHQLERE +
Sbjct: 1   MGISASDVIPLSYARANFSELADEVKGGAEKIITKNGESYIALIDANRLDYYHQLERERI 60

Query: 126 HLLTIEDARAGLADVAAGHVDDARTALNGLKRRRTA 161
           HLL I++A  GL DVAAG V DAR+ +  +KRRR+A
Sbjct: 61  HLLLIDEASRGLDDVAAGKVKDARSVIQAIKRRRSA 96


>ref|YP_316036.1| prevent-host-death protein [Thiobacillus denitrificans ATCC 25259]
 gb|AAZ98231.1| Prevent-host-death protein [Thiobacillus denitrificans ATCC 25259]
          Length = 185

 Score =  120 bits (300), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 69/110 (62%), Positives = 80/110 (72%)

Query: 52  YTVQESVHHFRRSEMAFSSTDVITLTQARAQLSELADQVKAGTEKIITKNGVSYVALIDA 111
           Y V  SV  F    M F++ DV+  TQARA LSELADQ KAG EKIITKNG SYVALIDA
Sbjct: 56  YAVHNSVIPFEELAMGFTTGDVVPFTQARANLSELADQAKAGAEKIITKNGESYVALIDA 115

Query: 112 ERLDYYHQLEREHLHLLTIEDARAGLADVAAGHVDDARTALNGLKRRRTA 161
           +RLDYYH+LERE +HLL I+DAR GLAD+ AG    A  A+  L++RR A
Sbjct: 116 DRLDYYHRLERERIHLLLIDDARRGLADIDAGRTFAADDAIERLQQRRAA 165


>emb|CBJ39430.1| conserved protein of unknown function; putative prevent-host-death
           family protein [Ralstonia solanacearum CMR15]
          Length = 98

 Score =  120 bits (300), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 67/97 (69%), Positives = 80/97 (82%)

Query: 66  MAFSSTDVITLTQARAQLSELADQVKAGTEKIITKNGVSYVALIDAERLDYYHQLEREHL 125
           MAFS+ D+I L+QARA LSELA+QVKAG EKI+TKNG SY+ALIDA+RLDYYHQLER  +
Sbjct: 1   MAFSARDIIPLSQARAHLSELAEQVKAGAEKIVTKNGESYIALIDAQRLDYYHQLERARI 60

Query: 126 HLLTIEDARAGLADVAAGHVDDARTALNGLKRRRTAK 162
           HLL +++A  GLADV AG V DAR AL  LK RR++K
Sbjct: 61  HLLVLDEASKGLADVEAGRVKDARRALGALKHRRSSK 97


>ref|NP_518385.1| hypothetical protein RSc0264 [Ralstonia solanacearum GMI1000]
 ref|YP_003753760.1| hypothetical protein RPSI07_3150 [Ralstonia solanacearum PSI07]
 emb|CAD13792.1| hypothetical protein of unknown function duf172 [Ralstonia
           solanacearum GMI1000]
 emb|CBJ52502.1| conserved protein of unknown function; putative prevent-host-death
           family protein [Ralstonia solanacearum PSI07]
 emb|CCA80403.1| conserved hypothetical protein; putative prevent-host-death family
           protein [blood disease bacterium R229]
 emb|CCA88531.1| conserved hypothetical protein; putative prevent-host-death family
           protein [Ralstonia syzygii R24]
          Length = 99

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 67/96 (69%), Positives = 79/96 (82%)

Query: 66  MAFSSTDVITLTQARAQLSELADQVKAGTEKIITKNGVSYVALIDAERLDYYHQLEREHL 125
           MAFS+ DVI L+QARA LSELA+QVKAG EKI+TKNG SY+ALIDA+RLDYYHQLER  +
Sbjct: 1   MAFSARDVIPLSQARANLSELAEQVKAGAEKIVTKNGESYIALIDAQRLDYYHQLERARI 60

Query: 126 HLLTIEDARAGLADVAAGHVDDARTALNGLKRRRTA 161
           HLL +++A  GLADV AG V DAR  L  LKRRR++
Sbjct: 61  HLLVLDEASKGLADVEAGRVKDARQTLGALKRRRSS 96