BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3379.p (305 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776286.1| organic solvents resistance ABC transporter ... 495 e-138 ref|ZP_06877775.1| ABC-type transporter, periplasmic component [... 322 5e-86 ref|NP_251903.1| hypothetical protein PA3213 [Pseudomonas aerugi... 322 6e-86 ref|ZP_07794531.1| ABC-type transporter, periplasmic component [... 320 1e-85 ref|YP_001347294.1| hypothetical protein PSPA7_1913 [Pseudomonas... 320 2e-85 >ref|YP_003776286.1| organic solvents resistance ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ64378.1| ABC-type transport system involved in resistance to organic solvents, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 305 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 276/305 (90%), Positives = 290/305 (95%) Query: 1 METRAHHVLIGLFTILVALAALVFCLWLTKVGQDRDVDYYTVIFNEAVSGLSRGSPVQYS 60 METRAHHVLIGLFTILVAL AL FCLWLTK GQDRDVDYYTVIFNEAVSGLSRGSPVQYS Sbjct: 1 METRAHHVLIGLFTILVALGALGFCLWLTKAGQDRDVDYYTVIFNEAVSGLSRGSPVQYS 60 Query: 61 GIKVGDVVGLSLDPADPRKVRARIRVTGKAPIKEDTGAKLALAGITGTALIQLTNGSPES 120 GIKVGDVVGLSLDPADPRKVRARIRV G+APIKEDTGAKLALAGITGTALIQLTNGSP+S Sbjct: 61 GIKVGDVVGLSLDPADPRKVRARIRVVGRAPIKEDTGAKLALAGITGTALIQLTNGSPQS 120 Query: 121 PRLESKDGNDPIIIASPSPLSALLSNGEDLLSNVNEVLLNAKQFLAPENARRLNQTLAHL 180 PRLESKDG+DP+IIASPSPLSALLSNGEDLL NVNEVL+NAKQFLAP+NARRLN TLAHL Sbjct: 121 PRLESKDGSDPVIIASPSPLSALLSNGEDLLGNVNEVLINAKQFLAPDNARRLNATLAHL 180 Query: 181 EQLTDTLANQRGNVGTAMQELAAAARQANLAMQSANQLLATRGNDAMGNLQQAMRSLAAS 240 E+LT TLA QR N G AMQELA AARQANLAMQSANQLL+TRGNDAM NLQQAMRSLAAS Sbjct: 181 EELTSTLAAQRNNAGAAMQELAEAARQANLAMQSANQLLSTRGNDAMSNLQQAMRSLAAS 240 Query: 241 SQQIEKLIQQNQAALNNGAQGVAEIGPAITELRSTLASVRAISRKLESNPGAYLLGQDNL 300 SQQ+E+LIQQNQAALNNGAQGVAEIGPAI ELR+TL+SVRA+SRKLESNPGAYLLG DN+ Sbjct: 241 SQQVERLIQQNQAALNNGAQGVAEIGPAIAELRATLSSVRAVSRKLESNPGAYLLGHDNV 300 Query: 301 QEFQP 305 QEFQP Sbjct: 301 QEFQP 305 >ref|ZP_06877775.1| ABC-type transporter, periplasmic component [Pseudomonas aeruginosa PAb1] gb|EGM23572.1| ABC-type transporter, periplasmic component [Pseudomonas aeruginosa 152504] Length = 312 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 176/312 (56%), Positives = 230/312 (73%), Gaps = 7/312 (2%) Query: 1 METRAHHVLIGLFTILVALAALVFCLWLTKVGQDRDVDYYTVIFNEAVSGLSRGSPVQYS 60 METRAHHVLIGLF+++V AAL+F LWL K G + +YY ++FNEAVSGLS+GS VQYS Sbjct: 1 METRAHHVLIGLFSVIVIGAALLFGLWLAKSGSEGKFNYYDIVFNEAVSGLSQGSSVQYS 60 Query: 61 GIKVGDVVGLSLDPADPRKVRARIRVTGKAPIKEDTGAKLALAGITGTALIQLTNGSPES 120 GIKVGDV L LDP DPRKV ARIRV APIK+DT AKLAL GITGT++IQL++G+P S Sbjct: 61 GIKVGDVAFLRLDPQDPRKVWARIRVVASAPIKQDTTAKLALTGITGTSIIQLSSGTPAS 120 Query: 121 PRLESKDGNDPIIIASPSPLSALLSNGEDLLSNVNEVLLNAKQFLAPENARRLNQTLAHL 180 P LE KDG P+I+A+PSPL+ LLSNGEDL+ N+N+++ L+ EN R+++TL HL Sbjct: 121 PMLEGKDGKIPVIVATPSPLTQLLSNGEDLMGNINQLIARFSNLLSEENTARISRTLDHL 180 Query: 181 EQLTDTLANQRGNVGTAMQELAAAARQANLA-------MQSANQLLATRGNDAMGNLQQA 233 +Q T L+ +R NV MQ+LA A+RQAN A M+SAN LL +G M N + Sbjct: 181 DQATGALSAERENVSAVMQQLAQASRQANAALAQASELMRSANGLLNEQGKGMMENANKT 240 Query: 234 MRSLAASSQQIEKLIQQNQAALNNGAQGVAEIGPAITELRSTLASVRAISRKLESNPGAY 293 M SL +S +++LI +N+ +L+ G QG+AE+GPA++ELR TLA++R ISR+LE NP Y Sbjct: 241 MASLERTSATLDQLISENRHSLDGGIQGLAELGPAVSELRDTLAALRGISRRLEENPANY 300 Query: 294 LLGQDNLQEFQP 305 LLG++ +EF P Sbjct: 301 LLGREKTKEFTP 312 >ref|NP_251903.1| hypothetical protein PA3213 [Pseudomonas aeruginosa PAO1] ref|ZP_01366661.1| hypothetical protein PaerPA_01003810 [Pseudomonas aeruginosa PACS2] ref|YP_789966.1| hypothetical protein PA14_22660 [Pseudomonas aeruginosa UCBPP-PA14] ref|YP_002439458.1| ABC-type transporter, periplasmic component [Pseudomonas aeruginosa LESB58] ref|ZP_04929498.1| hypothetical protein PACG_02140 [Pseudomonas aeruginosa C3719] ref|ZP_04935223.1| hypothetical protein PA2G_02622 [Pseudomonas aeruginosa 2192] gb|AAG06601.1|AE004744_16 hypothetical protein PA3213 [Pseudomonas aeruginosa PAO1] gb|ABJ12439.1| ABC-type transporter, periplasmic component [Pseudomonas aeruginosa UCBPP-PA14] gb|EAZ53617.1| hypothetical protein PACG_02140 [Pseudomonas aeruginosa C3719] gb|EAZ59342.1| hypothetical protein PA2G_02622 [Pseudomonas aeruginosa 2192] emb|CAW26582.1| ABC-type transporter, periplasmic component [Pseudomonas aeruginosa LESB58] gb|EGM23180.1| ABC-type transporter, periplasmic component [Pseudomonas aeruginosa 138244] dbj|GAA18910.1| ABC-type transporter, periplasmic component [Pseudomonas aeruginosa NCMG1179] gb|AEO74245.1| ABC-type transporter, periplasmic component [Pseudomonas aeruginosa M18] Length = 312 Score = 322 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 175/312 (56%), Positives = 230/312 (73%), Gaps = 7/312 (2%) Query: 1 METRAHHVLIGLFTILVALAALVFCLWLTKVGQDRDVDYYTVIFNEAVSGLSRGSPVQYS 60 METRAHHVLIGLF+++V AAL+F LWL K G + +YY ++FNEAVSGLS+GS VQYS Sbjct: 1 METRAHHVLIGLFSVIVIGAALLFGLWLAKSGSEGKFNYYDIVFNEAVSGLSQGSSVQYS 60 Query: 61 GIKVGDVVGLSLDPADPRKVRARIRVTGKAPIKEDTGAKLALAGITGTALIQLTNGSPES 120 GIKVGDV L LDP DPRKV ARIRV APIK+DT AKLAL GITGT++IQL++G+P S Sbjct: 61 GIKVGDVAFLRLDPKDPRKVWARIRVVASAPIKQDTTAKLALTGITGTSIIQLSSGTPAS 120 Query: 121 PRLESKDGNDPIIIASPSPLSALLSNGEDLLSNVNEVLLNAKQFLAPENARRLNQTLAHL 180 P LE KDG P+I+A+PSPL+ LLSNGEDL+ N+N+++ L+ EN R+++TL HL Sbjct: 121 PMLEGKDGKIPVIVATPSPLTQLLSNGEDLMGNINQLIARFSNLLSEENTARISRTLDHL 180 Query: 181 EQLTDTLANQRGNVGTAMQELAAAARQANLA-------MQSANQLLATRGNDAMGNLQQA 233 +Q T L+ +R NV MQ+LA A+RQAN A M+SAN LL +G + N + Sbjct: 181 DQATGALSAERENVSAVMQQLAQASRQANAALAQASELMRSANGLLNEQGKGMLENANKT 240 Query: 234 MRSLAASSQQIEKLIQQNQAALNNGAQGVAEIGPAITELRSTLASVRAISRKLESNPGAY 293 M SL +S +++LI +N+ +L+ G QG+AE+GPA++ELR TLA++R ISR+LE NP Y Sbjct: 241 MASLERTSATLDQLISENRHSLDGGIQGLAELGPAVSELRDTLAALRGISRRLEENPANY 300 Query: 294 LLGQDNLQEFQP 305 LLG++ +EF P Sbjct: 301 LLGREKTKEFTP 312 >ref|ZP_07794531.1| ABC-type transporter, periplasmic component [Pseudomonas aeruginosa 39016] gb|EFQ39627.1| ABC-type transporter, periplasmic component [Pseudomonas aeruginosa 39016] dbj|BAK91154.1| hypothetical protein NCGM2_4328 [Pseudomonas aeruginosa NCGM2.S1] Length = 312 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 175/312 (56%), Positives = 230/312 (73%), Gaps = 7/312 (2%) Query: 1 METRAHHVLIGLFTILVALAALVFCLWLTKVGQDRDVDYYTVIFNEAVSGLSRGSPVQYS 60 METRAHHVLIGLF+++V AAL+F LWL K G + +YY ++FNEAVSGLS+GS VQYS Sbjct: 1 METRAHHVLIGLFSVIVIGAALLFGLWLAKSGSEGKFNYYDIVFNEAVSGLSQGSSVQYS 60 Query: 61 GIKVGDVVGLSLDPADPRKVRARIRVTGKAPIKEDTGAKLALAGITGTALIQLTNGSPES 120 GIKVGDV L LDP DPRKV ARIRV APIK+DT AKLAL GITGT++IQL++G+P S Sbjct: 61 GIKVGDVAFLRLDPQDPRKVWARIRVVASAPIKQDTTAKLALTGITGTSIIQLSSGTPAS 120 Query: 121 PRLESKDGNDPIIIASPSPLSALLSNGEDLLSNVNEVLLNAKQFLAPENARRLNQTLAHL 180 P LE KDG P+I+A+PSPL+ LLSNGEDL+ N+N+++ L+ EN R+++TL HL Sbjct: 121 PMLEGKDGKIPVIVATPSPLTQLLSNGEDLMGNINQLIARFSNLLSEENTARISRTLDHL 180 Query: 181 EQLTDTLANQRGNVGTAMQELAAAARQANLA-------MQSANQLLATRGNDAMGNLQQA 233 +Q T L+ +R NV MQ+LA A+RQAN A M+SAN LL +G + N + Sbjct: 181 DQATGALSAERENVSAVMQQLAQASRQANAALAQASELMRSANGLLNEQGKGMLENANKT 240 Query: 234 MRSLAASSQQIEKLIQQNQAALNNGAQGVAEIGPAITELRSTLASVRAISRKLESNPGAY 293 M SL +S +++LI +N+ +L+ G QG+AE+GPA++ELR TLA++R ISR+LE NP Y Sbjct: 241 MASLERTSATLDQLISENRHSLDGGIQGLAELGPAVSELRDTLAALRGISRRLEENPANY 300 Query: 294 LLGQDNLQEFQP 305 LLG++ +EF P Sbjct: 301 LLGREKTKEFTP 312 >ref|YP_001347294.1| hypothetical protein PSPA7_1913 [Pseudomonas aeruginosa PA7] gb|ABR84694.1| hypothetical protein PSPA7_1913 [Pseudomonas aeruginosa PA7] Length = 312 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 173/312 (55%), Positives = 231/312 (74%), Gaps = 7/312 (2%) Query: 1 METRAHHVLIGLFTILVALAALVFCLWLTKVGQDRDVDYYTVIFNEAVSGLSRGSPVQYS 60 METRAHHVLIGLF+++V AAL+F LWL K G + +YY ++FNEAVSGLS+GS VQYS Sbjct: 1 METRAHHVLIGLFSVIVIGAALLFGLWLAKSGSEGKFNYYDIVFNEAVSGLSQGSSVQYS 60 Query: 61 GIKVGDVVGLSLDPADPRKVRARIRVTGKAPIKEDTGAKLALAGITGTALIQLTNGSPES 120 GIKVGDV L LDP DPRKV ARIRV APIK+DT AKLAL GITGT++IQL++G+P S Sbjct: 61 GIKVGDVAFLRLDPQDPRKVWARIRVVASAPIKQDTTAKLALTGITGTSIIQLSSGTPSS 120 Query: 121 PRLESKDGNDPIIIASPSPLSALLSNGEDLLSNVNEVLLNAKQFLAPENARRLNQTLAHL 180 P LE KDG P+I+A+PSPL+ LLSNGEDL+ N+N+++ L+ EN+ R+++TL HL Sbjct: 121 PMLEGKDGKIPVIVATPSPLTQLLSNGEDLMGNINQLIARFSNLLSEENSARISRTLDHL 180 Query: 181 EQLTDTLANQRGNVGTAMQELAAAARQANLA-------MQSANQLLATRGNDAMGNLQQA 233 +Q T L+ +R NV MQ+LA A++QAN A M++AN LL +G + N + Sbjct: 181 DQATGALSAERENVSAVMQQLAQASKQANAALAQASELMRNANGLLNEQGKGMLENASKT 240 Query: 234 MRSLAASSQQIEKLIQQNQAALNNGAQGVAEIGPAITELRSTLASVRAISRKLESNPGAY 293 M SL +S +++LI +N+ +L+ G QG+AE+GPA++ELR TLA++R ISR+LE NP Y Sbjct: 241 MASLERTSATLDQLISENRHSLDGGIQGIAELGPAVSELRDTLAALRGISRRLEENPANY 300 Query: 294 LLGQDNLQEFQP 305 LLG++ +EF P Sbjct: 301 LLGREKTKEFTP 312