BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3371.p         (789 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776915.1| exporter of the RND superfamily protein [Her...  1497   0.0  
ref|YP_003777318.1| protein exporter of the Resistance-Nodulatio...  1234   0.0  
ref|YP_002889947.1| RND efflux transporter [Thauera sp. MZ1T] >g...  1081   0.0  
ref|YP_001861016.1| RND efflux transporter [Burkholderia phymatu...  1046   0.0  
ref|YP_004234202.1| RND efflux transporter [Acidovorax avenae su...  1040   0.0  

>ref|YP_003776915.1| exporter of the RND superfamily protein [Herbaspirillum seropedicae
           SmR1]
 gb|ADJ65007.1| exporter of the RND superfamily protein [Herbaspirillum seropedicae
           SmR1]
          Length = 789

 Score = 1497 bits (3876), Expect = 0.0,   Method: Composition-based stats.
 Identities = 762/789 (96%), Positives = 772/789 (97%)

Query: 1   MANAPSLFSLDRLEASLFRLRIPILTLLLAFTAVLSYFALQLRMDAGFEKQMPTHHEYID 60
           MA  PSLFSLDRLEASLFRLRIPIL LLLAFTAVLSYFALQLRMDAGFEKQMPTHHEYID
Sbjct: 1   MAATPSLFSLDRLEASLFRLRIPILALLLAFTAVLSYFALQLRMDAGFEKQMPTHHEYID 60

Query: 61  TFKQYRDDVLGANRLNIVLRARKGSIWTREGLTRLSEMTQAVMFLPNISRLGVQSLWTPN 120
           TFKQYRDDVLGANRLNIVLRAR GSIWT+EGLTRLSEMTQAVMFLPNISRLGVQSLWTPN
Sbjct: 61  TFKQYRDDVLGANRLNIVLRARHGSIWTKEGLTRLSEMTQAVMFLPNISRLGVQSLWTPN 120

Query: 121 TFVNEITEEGFRADPVIPGTVIPSALTPETIEQIRNTAVNGGFVGTLISRNQDSAMIVAE 180
           TFVNEITEEGFRADPVIPGTVIPSALTPE IEQIRNTA+NGGFVGTLISRNQDSAMIVAE
Sbjct: 121 TFVNEITEEGFRADPVIPGTVIPSALTPEIIEQIRNTAINGGFVGTLISRNQDSAMIVAE 180

Query: 181 INEFDVKGDKVDYLAYNKLLNDLRAKYENADFEVQIIGFAKQIGDVADGAEGVLKFCAMA 240
           INEFD KG+KVDYLAYNKLLNDLRAKYENADFEVQIIGFAKQIGDVADGAEGV+KFC MA
Sbjct: 181 INEFDAKGEKVDYLAYNKLLNDLRAKYENADFEVQIIGFAKQIGDVADGAEGVVKFCIMA 240

Query: 241 LLLTTIAVYWYCRSLPFTLLPVACSLVSLVWQFGTLRLLGYGLDPLAVLVPFLVFAIGVS 300
           LLLT IAVYWYCRSLPFTLLPVACSLVSLVWQFGTLRLLGYGLDPLAVLVPFLVFAIGVS
Sbjct: 241 LLLTAIAVYWYCRSLPFTLLPVACSLVSLVWQFGTLRLLGYGLDPLAVLVPFLVFAIGVS 300

Query: 301 HGVQQINTIVRGIASGQSCEAAARASFKGLLIPGVLALVTALVSFVTLVMIPIPMVRELA 360
           HGVQQINTIVRGIASGQSCEAAARASFKGLLIPGVLALVTALVSFVTLVMIPIPMVRELA
Sbjct: 301 HGVQQINTIVRGIASGQSCEAAARASFKGLLIPGVLALVTALVSFVTLVMIPIPMVRELA 360

Query: 361 ITASIGVGYKIITNLVMLPLAASLLKVGKTYADSAMRAQQARGRWLAVLSRSAQPRVARS 420
           ITASIGVGYKIITNLVMLPLAASLLKVGKTYAD+AMRAQQARGRWLAVLSRSAQPRVARS
Sbjct: 361 ITASIGVGYKIITNLVMLPLAASLLKVGKTYADAAMRAQQARGRWLAVLSRSAQPRVARS 420

Query: 421 IVVITLLVLAGSAWYSHDRLVGTLQPGAPELHADARYNRDARWIADNYGNGLDWLTVILS 480
           IVVITLLVLAGSAWYSHDRLVGTLQPGAPELHADARYNRDARWIADNYGNGLDWLTVIL+
Sbjct: 421 IVVITLLVLAGSAWYSHDRLVGTLQPGAPELHADARYNRDARWIADNYGNGLDWLTVILA 480

Query: 481 TPSNSCDNVSFGRYQDQFDTVMRHVPGVLSVSSFADQMKIYNEGYNEGNPAMFTVPLDAA 540
           TP+NSCD V FGRYQDQFDTVMRHVPGVLSVSSFADQMKIYNEGYNEGNPAMFTVPLDA 
Sbjct: 481 TPANSCDQVRFGRYQDQFDTVMRHVPGVLSVSSFADQMKIYNEGYNEGNPAMFTVPLDAG 540

Query: 541 NYAALAVEIGRVRGFLSKDCNMLASHLFLADHKAATINGVIQAVKAYRDQHKLAGLEIRL 600
           NYAALAVEIGRVRGFLSKDCNMLASHLFLADHKAATINGVIQAVK YRDQHKL GLEIRL
Sbjct: 541 NYAALAVEIGRVRGFLSKDCNMLASHLFLADHKAATINGVIQAVKRYRDQHKLEGLEIRL 600

Query: 601 AAGNAGVIAAVNDEVEKSELPMMLYVYGAIVLLVFAVYRDWRAIIACCLPLTVATLYTYA 660
           AAGNAGVIAAVNDEVEKSELPMMLYVYGAIVLLVFAVYRDWRAIIACCLPLTVAT   YA
Sbjct: 601 AAGNAGVIAAVNDEVEKSELPMMLYVYGAIVLLVFAVYRDWRAIIACCLPLTVATFIGYA 660

Query: 661 FMKQLQIGLTVATLPVMVLAVGIGVDYAFYIYNRLQLHLAAGLPIEQALHNAIQEVGIAT 720
           FMKQLQIGLTVATLPVMVLAVGIGVDYAFYIYNRLQLHLAAGL IE+ALHNAIQEVGIAT
Sbjct: 661 FMKQLQIGLTVATLPVMVLAVGIGVDYAFYIYNRLQLHLAAGLAIEEALHNAIQEVGIAT 720

Query: 721 IFTAITLAIGVATWSFSDLKFQADMGKLLAFMFLVNLVMAMTALPAFAVVLEKMFPRKSP 780
           IFTAITLAIGVATWSFSDLKFQADMGKLLAFMFLVNL+MAMTALPAFAVVL+KMFPRKSP
Sbjct: 721 IFTAITLAIGVATWSFSDLKFQADMGKLLAFMFLVNLIMAMTALPAFAVVLDKMFPRKSP 780

Query: 781 IKLNSALAH 789
           IKLNSALAH
Sbjct: 781 IKLNSALAH 789


>ref|YP_003777318.1| protein exporter of the Resistance-Nodulation-Cell Division (RND)
           superfamily protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ65410.1| protein exporter of the Resistance-Nodulation-Cell Division (RND)
           superfamily protein [Herbaspirillum seropedicae SmR1]
          Length = 755

 Score = 1234 bits (3193), Expect = 0.0,   Method: Composition-based stats.
 Identities = 614/755 (81%), Positives = 677/755 (89%)

Query: 35  LSYFALQLRMDAGFEKQMPTHHEYIDTFKQYRDDVLGANRLNIVLRARKGSIWTREGLTR 94
           ++ F+LQLRMDAGFEKQ+P+ HEY+ T  QYRD++ GANRLNIVLRAR GSIWT+EGLTR
Sbjct: 1   MAVFSLQLRMDAGFEKQIPSDHEYVATQHQYRDELFGANRLNIVLRARHGSIWTKEGLTR 60

Query: 95  LSEMTQAVMFLPNISRLGVQSLWTPNTFVNEITEEGFRADPVIPGTVIPSALTPETIEQI 154
           L+ MTQAVMFLPN++RLGVQSLWTPNTFVNEITEEGFRADPVI GTV P +LTPE I  I
Sbjct: 61  LNAMTQAVMFLPNVNRLGVQSLWTPNTFVNEITEEGFRADPVIAGTVTPESLTPEVIASI 120

Query: 155 RNTAVNGGFVGTLISRNQDSAMIVAEINEFDVKGDKVDYLAYNKLLNDLRAKYENADFEV 214
           R++A NGGFVGTL+SR QDSAMI+AEINEFD  G KVDYLAYNKLLNDLRAKYENADFEV
Sbjct: 121 RDSANNGGFVGTLVSRKQDSAMIIAEINEFDANGKKVDYLAYNKLLNDLRAKYENADFEV 180

Query: 215 QIIGFAKQIGDVADGAEGVLKFCAMALLLTTIAVYWYCRSLPFTLLPVACSLVSLVWQFG 274
           QIIGFAKQIGDVADGA+GVLKFC MALLLT +AVYWYCRSLPFTLLP+ CSLVSLVWQFG
Sbjct: 181 QIIGFAKQIGDVADGAQGVLKFCIMALLLTALAVYWYCRSLPFTLLPIVCSLVSLVWQFG 240

Query: 275 TLRLLGYGLDPLAVLVPFLVFAIGVSHGVQQINTIVRGIASGQSCEAAARASFKGLLIPG 334
           TL LLGYGLDPLAVLVPFLVFAIGVSHGVQQIN IVRGIA+G  CE AARASF+GLL+PG
Sbjct: 241 TLHLLGYGLDPLAVLVPFLVFAIGVSHGVQQINYIVRGIAAGMGCEEAARASFRGLLVPG 300

Query: 335 VLALVTALVSFVTLVMIPIPMVRELAITASIGVGYKIITNLVMLPLAASLLKVGKTYADS 394
           VLALVTA VSF+TL +IPIPMV+ELAITASIGVGYKIITNLVMLPLAASLLKV K YAD+
Sbjct: 301 VLALVTAFVSFITLTLIPIPMVKELAITASIGVGYKIITNLVMLPLAASLLKVNKAYADA 360

Query: 395 AMRAQQARGRWLAVLSRSAQPRVARSIVVITLLVLAGSAWYSHDRLVGTLQPGAPELHAD 454
           AMRAQQ R RWL V +R+A PR AR IVV+TL + A S WYS DRLVGTLQ GAPEL AD
Sbjct: 361 AMRAQQKRARWLQVFARAAHPRNARVIVVVTLALFAASVWYSSDRLVGTLQAGAPELRAD 420

Query: 455 ARYNRDARWIADNYGNGLDWLTVILSTPSNSCDNVSFGRYQDQFDTVMRHVPGVLSVSSF 514
           +RYN DA+ I+DNY  GLDWL+VIL+TP NSCD V+FGRYQ+QFD  MRHVPGV+SVSSF
Sbjct: 421 SRYNLDAKSISDNYDTGLDWLSVILATPENSCDKVAFGRYQEQFDAAMRHVPGVMSVSSF 480

Query: 515 ADQMKIYNEGYNEGNPAMFTVPLDAANYAALAVEIGRVRGFLSKDCNMLASHLFLADHKA 574
           A+QMKIYNEGYNEGNP+M++VPLD ANYAALAVEIGRVRGFLSKDC+MLA+HL+L DHKA
Sbjct: 481 AEQMKIYNEGYNEGNPSMYSVPLDPANYAALAVEIGRVRGFLSKDCSMLATHLYLTDHKA 540

Query: 575 ATINGVIQAVKAYRDQHKLAGLEIRLAAGNAGVIAAVNDEVEKSELPMMLYVYGAIVLLV 634
           +TING+I AVK YR  H L GL IRLAAGNAGVIAAVN+EVEKSELPMMLYVY AI++LV
Sbjct: 541 STINGIIAAVKQYRAAHPLPGLTIRLAAGNAGVIAAVNEEVEKSELPMMLYVYAAIIVLV 600

Query: 635 FAVYRDWRAIIACCLPLTVATLYTYAFMKQLQIGLTVATLPVMVLAVGIGVDYAFYIYNR 694
           FAVYRD RA++ACCLPLTVAT   YAFMKQLQIGLTVATLPVMVLAVGIGVDYAFYIY+R
Sbjct: 601 FAVYRDLRAVVACCLPLTVATFIGYAFMKQLQIGLTVATLPVMVLAVGIGVDYAFYIYSR 660

Query: 695 LQLHLAAGLPIEQALHNAIQEVGIATIFTAITLAIGVATWSFSDLKFQADMGKLLAFMFL 754
           LQ+HLAAG  I  AL  +IQE+G+ATIFTAITLAIGVATWSFS LKFQADMGKLLAFMF+
Sbjct: 661 LQMHLAAGEAIAVALEKSIQEIGVATIFTAITLAIGVATWSFSQLKFQADMGKLLAFMFI 720

Query: 755 VNLVMAMTALPAFAVVLEKMFPRKSPIKLNSALAH 789
           VNL+MAMTALPAFAVVLE+MFPRK  IK+NS + H
Sbjct: 721 VNLIMAMTALPAFAVVLERMFPRKGKIKVNSMMNH 755


>ref|YP_002889947.1| RND efflux transporter [Thauera sp. MZ1T]
 gb|ACR01570.1| RND efflux transporter [Thauera sp. MZ1T]
          Length = 797

 Score = 1081 bits (2796), Expect = 0.0,   Method: Composition-based stats.
 Identities = 546/780 (70%), Positives = 644/780 (82%)

Query: 10  LDRLEASLFRLRIPILTLLLAFTAVLSYFALQLRMDAGFEKQMPTHHEYIDTFKQYRDDV 69
           L  LEA  FR R  IL  L+ FTA++ YFALQLRMDAGFEKQMP  HEYI TF +YR+DV
Sbjct: 18  LRLLEAVCFRFRGTILVALMLFTALMGYFALQLRMDAGFEKQMPIGHEYIQTFDKYREDV 77

Query: 70  LGANRLNIVLRARKGSIWTREGLTRLSEMTQAVMFLPNISRLGVQSLWTPNTFVNEITEE 129
           LGANRLN V++AR G IWT+ GL RL E+TQAV FLPN+ RLGVQSLWTPN+FVNEITEE
Sbjct: 78  LGANRLNFVVKARSGDIWTQAGLERLYEVTQAVSFLPNVDRLGVQSLWTPNSFVNEITEE 137

Query: 130 GFRADPVIPGTVIPSALTPETIEQIRNTAVNGGFVGTLISRNQDSAMIVAEINEFDVKGD 189
           GFRADP+I GT++P  LTPE I  I+  A  GGF+GTL++R+Q SAMIVAE++E D +G 
Sbjct: 138 GFRADPLISGTIMPRDLTPEIIAGIQRAASQGGFIGTLVARDQTSAMIVAELHERDREGK 197

Query: 190 KVDYLAYNKLLNDLRAKYENADFEVQIIGFAKQIGDVADGAEGVLKFCAMALLLTTIAVY 249
            +DY+AYN++L +LRAK+E+A FEVQIIGFAKQIGD+ADGA  VL+FCA+ALLLT +AVY
Sbjct: 198 ALDYVAYNRILEELRAKFEDAQFEVQIIGFAKQIGDIADGASAVLEFCAIALLLTALAVY 257

Query: 250 WYCRSLPFTLLPVACSLVSLVWQFGTLRLLGYGLDPLAVLVPFLVFAIGVSHGVQQINTI 309
           WYC S+ FTLLP+ACSL SLVWQFGTLRLLGYGLDPLAVLVPFLVFAIGVSHGVQQIN I
Sbjct: 258 WYCHSVRFTLLPIACSLTSLVWQFGTLRLLGYGLDPLAVLVPFLVFAIGVSHGVQQINFI 317

Query: 310 VRGIASGQSCEAAARASFKGLLIPGVLALVTALVSFVTLVMIPIPMVRELAITASIGVGY 369
           VR ++ G+S + AARASF GLLIPG LALVTA VSF+TL++IPIPMVRELAITAS+GVGY
Sbjct: 318 VRELSHGKSSDEAARASFTGLLIPGTLALVTAFVSFITLILIPIPMVRELAITASLGVGY 377

Query: 370 KIITNLVMLPLAASLLKVGKTYADSAMRAQQARGRWLAVLSRSAQPRVARSIVVITLLVL 429
           KI+TNLVMLPLAASL    K YAD A+  ++ R  WL  L+R A+PR A  +++ TL V 
Sbjct: 378 KIVTNLVMLPLAASLFTFTKEYADKAVLKREQRSAWLRTLARVAEPRNAAIVILATLAVF 437

Query: 430 AGSAWYSHDRLVGTLQPGAPELHADARYNRDARWIADNYGNGLDWLTVILSTPSNSCDNV 489
           A + W SHDR++GT+QPGAPEL A+AR+NRDA  IA +Y  GLDWLTVI   P ++CD+V
Sbjct: 438 AVAVWQSHDRVIGTVQPGAPELRAEARFNRDAVSIASSYDTGLDWLTVIFEAPPDACDDV 497

Query: 490 SFGRYQDQFDTVMRHVPGVLSVSSFADQMKIYNEGYNEGNPAMFTVPLDAANYAALAVEI 549
           + GRYQD+F   +++VPGVLS  SF+ Q++ YNEGYNEGNP M  VP D  NYAALA EI
Sbjct: 498 AVGRYQDRFVAEIQYVPGVLSALSFSGQLRTYNEGYNEGNPKMSVVPGDPGNYAALATEI 557

Query: 550 GRVRGFLSKDCNMLASHLFLADHKAATINGVIQAVKAYRDQHKLAGLEIRLAAGNAGVIA 609
           GRVRGF++KDC+M A HLFL+DHKA TIN VI AVKA+R++ +  GL IRLA+GNAGV A
Sbjct: 558 GRVRGFMNKDCSMTAVHLFLSDHKATTINRVIAAVKAFRERDREPGLTIRLASGNAGVQA 617

Query: 610 AVNDEVEKSELPMMLYVYGAIVLLVFAVYRDWRAIIACCLPLTVATLYTYAFMKQLQIGL 669
           AVN+EV KSELPMMLYVY AI++LV  +YRD+RA+IACCLPLTV T   Y FMK+L+IGL
Sbjct: 618 AVNEEVHKSELPMMLYVYAAIMVLVALMYRDFRAVIACCLPLTVGTFIGYWFMKELEIGL 677

Query: 670 TVATLPVMVLAVGIGVDYAFYIYNRLQLHLAAGLPIEQALHNAIQEVGIATIFTAITLAI 729
           TVATLPVMVLAVGIGVDYA+YIYNRLQLHLA G  I +AL ++I EVG ATIFTAITLA 
Sbjct: 678 TVATLPVMVLAVGIGVDYAYYIYNRLQLHLAGGENIVKALEHSILEVGTATIFTAITLAA 737

Query: 730 GVATWSFSDLKFQADMGKLLAFMFLVNLVMAMTALPAFAVVLEKMFPRKSPIKLNSALAH 789
           GVATW FS+LKFQADMGKLLAFMF+VN+VMAMTALPAFAV LE++FPRK P++    LAH
Sbjct: 738 GVATWMFSELKFQADMGKLLAFMFMVNMVMAMTALPAFAVWLERIFPRKGPVRAPGILAH 797


>ref|YP_001861016.1| RND efflux transporter [Burkholderia phymatum STM815]
 gb|ACC73970.1| exporter, RND superfamily [Burkholderia phymatum STM815]
          Length = 786

 Score = 1046 bits (2706), Expect = 0.0,   Method: Composition-based stats.
 Identities = 510/786 (64%), Positives = 634/786 (80%), Gaps = 9/786 (1%)

Query: 9   SLDRLEASLFRLRIPILTLLLAFTAVLSYFALQLRMDAGFEKQMPTHHEYIDTFKQYRDD 68
           S+ +LE   F  R+ IL LL+ FT ++++FA+QLRMDAGFEKQ+P  HEY+ TF QYR +
Sbjct: 5   SIKKLERWFFGYRLAILALLVIFTIIMAFFAVQLRMDAGFEKQIPIGHEYVRTFNQYRSN 64

Query: 69  VLGANRLNIVLRARKGSIWTREGLTRLSEMTQAVMFLPNISRLGVQSLWTPNTFVNEITE 128
           +  ANRL +V+R+R G+IW++EGL +L+ +TQAV +LPN+ RLGVQSLWTPN+FVNEITE
Sbjct: 65  LFSANRLTVVVRSRNGTIWSKEGLQKLASVTQAVTYLPNVDRLGVQSLWTPNSFVNEITE 124

Query: 129 EGFRADPVIPGTVIPSALTPETIEQIRNTAVNGGFVGTLISRNQDSAMIVAEINEFDVKG 188
           +GFR+ P+IPGTV P  LTPE +  I  + V GGF+G+L+SR+  SAM+ AE++E    G
Sbjct: 125 DGFRSQPIIPGTVTPDGLTPEMVTTIHRSTVEGGFIGSLVSRDGKSAMVTAELSELGSDG 184

Query: 189 DKVDYLAYNKLL-NDLRAKYENADFEVQIIGFAKQIGDVADGAEGVLKFCAMALLLTTIA 247
            K+DY+ +N LL  D+R K+EN D+E+QIIGFAKQIGD+ADGA+ VL FCA+AL+LT +A
Sbjct: 185 KKIDYITFNHLLETDIRQKFENGDYEIQIIGFAKQIGDIADGAKSVLVFCAIALVLTALA 244

Query: 248 VYWYCRSLPFTLLPVACSLVSLVWQFGTLRLLGYGLDPLAVLVPFLVFAIGVSHGVQQIN 307
           VYWYC S+ FT+LP+ACSL SLVWQFGTLRLLG+GLDPL VLVPFLVFAIGVSHGVQQIN
Sbjct: 245 VYWYCHSIRFTILPIACSLTSLVWQFGTLRLLGFGLDPLGVLVPFLVFAIGVSHGVQQIN 304

Query: 308 TIVRGIASGQSCEAAARASFKGLLIPGVLALVTALVSFVTLVMIPIPMVRELAITASIGV 367
            I R +A G+S   AAR+SF GLLIPG LAL+TALVSFVTL++IPIPM+RELAITAS+GV
Sbjct: 305 FITRELAHGKSSYDAARSSFSGLLIPGTLALITALVSFVTLLLIPIPMIRELAITASLGV 364

Query: 368 GYKIITNLVMLPLAASLLKVGKTYADSAMRAQQARGRWLAVLSRSAQPRVARSIVVITLL 427
           GYKI+TNL+MLPLAAS +   ++YA+  M+ ++ R  WL  LSR A+PR A    VITL+
Sbjct: 365 GYKILTNLLMLPLAASFVSFDQSYAEKMMKLREQRSNWLRALSRVAEPRNA----VITLI 420

Query: 428 VLAG----SAWYSHDRLVGTLQPGAPELHADARYNRDARWIADNYGNGLDWLTVILSTPS 483
           VLAG    + W S DR+VGTLQPGAPEL  DAR+NRDA  IA+N+  GLDWL+V++  P+
Sbjct: 421 VLAGVFSAAVWESRDRVVGTLQPGAPELRPDARFNRDAVSIANNFDVGLDWLSVVIEAPA 480

Query: 484 NSCDNVSFGRYQDQFDTVMRHVPGVLSVSSFADQMKIYNEGYNEGNPAMFTVPLDAANYA 543
           +SC++ + G++ D+    ++ VPGV+SV+S+   ++ Y++GYNEGNP M  VP+D  NYA
Sbjct: 481 DSCESPAVGQFDDKLVYALQDVPGVVSVTSYPGMLRSYSQGYNEGNPKMAVVPIDQGNYA 540

Query: 544 ALAVEIGRVRGFLSKDCNMLASHLFLADHKAATINGVIQAVKAYRDQHKLAGLEIRLAAG 603
           AL+ EI RVRG+L+KDC+M A H++L DHKA TIN V+  VK +RD+H   G+ IRLAAG
Sbjct: 541 ALSTEIARVRGYLNKDCSMTAVHIYLTDHKATTINRVVNEVKLFRDRHPTPGVRIRLAAG 600

Query: 604 NAGVIAAVNDEVEKSELPMMLYVYGAIVLLVFAVYRDWRAIIACCLPLTVATLYTYAFMK 663
           NAGV+AA+NDEVEKSELPMMLYVYGAI++LVFAVYRD RA++ACCLPLTV T   Y FMK
Sbjct: 601 NAGVLAAINDEVEKSELPMMLYVYGAIIVLVFAVYRDLRAVVACCLPLTVGTFIGYWFMK 660

Query: 664 QLQIGLTVATLPVMVLAVGIGVDYAFYIYNRLQLHLAAGLPIEQALHNAIQEVGIATIFT 723
             +IGLTVATLPVMVLAVGIGVDYAFYIYNRLQ HLA G  I  AL ++I EVG+ATIFT
Sbjct: 661 SFEIGLTVATLPVMVLAVGIGVDYAFYIYNRLQAHLAEGESIVGALEHSILEVGMATIFT 720

Query: 724 AITLAIGVATWSFSDLKFQADMGKLLAFMFLVNLVMAMTALPAFAVVLEKMFPRKSPIKL 783
           AITLAIGVATWSFS LKFQADMGKLLAFMF+VNLVMAMTALPA AVVLE++FPR+ P++ 
Sbjct: 721 AITLAIGVATWSFSSLKFQADMGKLLAFMFIVNLVMAMTALPALAVVLERVFPRRKPVRA 780

Query: 784 NSALAH 789
              L H
Sbjct: 781 PGILGH 786


>ref|YP_004234202.1| RND efflux transporter [Acidovorax avenae subsp. avenae ATCC 19860]
 gb|ADX45635.1| RND efflux transporter [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 781

 Score = 1040 bits (2690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 525/781 (67%), Positives = 631/781 (80%), Gaps = 2/781 (0%)

Query: 10  LDRLEASLFRLRIPILTLLLAFTAVLSYFALQLRMDAGFEKQMPTHHEYIDTFKQYRDDV 69
           + R+E  +F  R  +L  L+ FT V+++FA+QLRMDAGFEKQMP  HEYI+TFK+YR+DV
Sbjct: 1   MQRVEQIVFHHRTVLLAALVLFTVVMAWFAVQLRMDAGFEKQMPVGHEYIETFKEYRNDV 60

Query: 70  LGANRLNIVLRARKGSIWTREGLTRLSEMTQAVMFLPNISRLGVQSLWTPNTFVNEITEE 129
           LGANRLNIV++AR GSIWT   L R+ E+TQAV +LPN+ RLGV+S+WTPN+FVNEITEE
Sbjct: 61  LGANRLNIVVKARHGSIWTPAALQRVYEVTQAVGYLPNVERLGVRSVWTPNSFVNEITEE 120

Query: 130 GFRADPVIPGTVIPSALTPETIEQIRNTAVNGGFVGTLISRNQDSAMIVAEINEFDVKGD 189
           GFRADP+I  T+ P  LTPE+I  IR  A  GGFVGTL+SR++ SAM+ AE+ E      
Sbjct: 121 GFRADPLIDSTITPGQLTPESIAGIRRAASQGGFVGTLVSRDETSAMVTAELLEVGADNT 180

Query: 190 KVDYLAYNKLLND-LRAKYENADFEVQIIGFAKQIGDVADGAEGVLKFCAMALLLTTIAV 248
           K+DY+AYN LL + +RAK+E+ADFE+QIIGFAKQIGD+ADGA  VLKFCA+AL+LT +AV
Sbjct: 181 KLDYVAYNHLLEERIRAKFEDADFEIQIIGFAKQIGDIADGARSVLKFCAIALVLTALAV 240

Query: 249 YWYCRSLPFTLLPVACSLVSLVWQFGTLRLLGYGLDPLAVLVPFLVFAIGVSHGVQQINT 308
           YWYCRS+ FTLLP+ CSL SLVWQFGTL+LLG+GLDPL VLVPFLVFAIGVSHGVQQIN 
Sbjct: 241 YWYCRSVRFTLLPIVCSLTSLVWQFGTLKLLGFGLDPLGVLVPFLVFAIGVSHGVQQINF 300

Query: 309 IVRGIASGQSCEAAARASFKGLLIPGVLALVTALVSFVTLVMIPIPMVRELAITASIGVG 368
           IVR I+ G+S   A R SF GLLIPG LALVTA VSFVTL++IPIPMVRELAITAS+GV 
Sbjct: 301 IVRQISHGRSNYDACRDSFTGLLIPGTLALVTAFVSFVTLLLIPIPMVRELAITASLGVA 360

Query: 369 YKIITNLVMLPLAASLLKVGKTYADSAMRAQQARGRWLAVLSRSAQPRVARSIVVITLLV 428
           YKI+TNLVMLP+AAS   +GK YAD+A+  ++ R  WL VL+R A+PR A  ++  T +V
Sbjct: 361 YKIVTNLVMLPVAASYFDIGKRYADAALVQRERRSGWLRVLARVAEPRNALLVLAATAVV 420

Query: 429 LAGSAWYSHDRLVGTLQPGAPELHADARYNRDARWIADNYGNGLDWLTVILSTPSNSCDN 488
            A + W S DR+VGTLQPGAPEL AD+R+NRDA  I+ +Y  GLDWLTV+   P +SC N
Sbjct: 421 FAAAVWQSRDRVVGTLQPGAPELRADSRFNRDAVAISGSYDTGLDWLTVVFEAPPDSCGN 480

Query: 489 VSFGRYQDQFDTVMRHVPGVLSVSSFADQMKIYNEGYNEGNPAMFTVPLDAANYAALAVE 548
           V+ G YQD+F   M+ V GVLSVSS+A Q+++YNEGYNEGNP M  +PLD  NYAAL+ E
Sbjct: 481 VNVGLYQDRFTWTMQPVEGVLSVSSYAGQLRLYNEGYNEGNPKMAVIPLDPGNYAALSTE 540

Query: 549 IGRVRGFLSKDCNMLASHLFLADHKAATINGVIQAVKAYRDQHKLAGLEIRLAAGNAGVI 608
           I R+ G + KDC+M A HLFL DHKAATI  VI AVK +R+  +  G+ IRLA+GNAGV+
Sbjct: 541 IARLPGMMRKDCSMTAVHLFLTDHKAATIQRVIDAVKRFREGDRQDGIVIRLASGNAGVL 600

Query: 609 AAVNDEVEKSELPMMLYVYGAIVLLVFAVYRDWRAIIACCLPLTVATLYTYAFMKQLQIG 668
           AA++DEVEKSELPMMLYVY AI++LVF VYRD RA++ACCLPLTV T   Y FMK+L+IG
Sbjct: 601 AAIDDEVEKSELPMMLYVYAAIIVLVFLVYRDLRAVVACCLPLTVGTFIGYWFMKELEIG 660

Query: 669 LTVATLPVMVLAVGIGVDYAFYIYNRLQLHLAAGLPIEQALHNAIQEVGIATIFTAITLA 728
           LTVATLPVMVLAVGIGVDYAFYIYNRL +HLA G  I +A+ +AI EVG ATIFTAITLA
Sbjct: 661 LTVATLPVMVLAVGIGVDYAFYIYNRLLMHLAHGQSIVKAVESAILEVGTATIFTAITLA 720

Query: 729 IGVATWSFSDLKFQADMGKLLAFMFLVNLVMAMTALPAFAVVLEKMFPRKSPIKLNSALA 788
           IGVATWSFS LKFQADMGKLLAFMF+VN+VMAMTALPA AV LE++FPR+ P+ L + L 
Sbjct: 721 IGVATWSFSQLKFQADMGKLLAFMFMVNMVMAMTALPAVAVWLERLFPRRKPV-LATGLQ 779

Query: 789 H 789
           H
Sbjct: 780 H 780