BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3362.p (485 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776279.1| outer membrane channel lipoprotein [Herbaspi... 515 e-144 ref|NP_521851.1| putative outer membrane CHANEL lipoprotein [Ral... 307 3e-81 ref|YP_003747520.1| Outer membrane efflux protein precursor [Ral... 305 1e-80 ref|YP_902031.1| outer membrane efflux protein [Pelobacter propi... 304 2e-80 emb|CCA87572.1| putative Outer membrane efflux protein precursor... 303 3e-80 >ref|YP_003776279.1| outer membrane channel lipoprotein [Herbaspirillum seropedicae SmR1] gb|ADJ64371.1| outer membrane channel lipoprotein [Herbaspirillum seropedicae SmR1] Length = 484 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 306/449 (68%), Positives = 371/449 (82%), Gaps = 1/449 (0%) Query: 36 DPLLARPPELDKGKILPGDDRPTGCATSPFTPGKVLTLVDAVDLALCHQPQVQASWAAIK 95 DPLLARPP+L G++LPGDD+ CA SP+ GK L+L DA+D ALC QPQ+QA+WAAIK Sbjct: 37 DPLLARPPDLITGRLLPGDDQRVECAASPYVAGKALSLADAIDQALCQQPQIQAAWAAIK 96 Query: 96 LQSSQLGEARAAYLPTLGAGVGQYRESATSDQGSSKRSIGTLYATLTWRLLDFGGRSANQ 155 LQ++QLGEARA YLPT+ +G + + + GS +RS+ TLYATLTWRLLDFGGRSANQ Sbjct: 97 LQAAQLGEARAGYLPTVTSGASKLNSATQYEGGSGRRSLTTLYATLTWRLLDFGGRSANQ 156 Query: 156 RAADVLLQAASASQDATLQKAMGNAVGLYYDAHSARAAQQSRERSLALARQILEAAIKRE 215 RAAD +LQ+A AS DA +QKA+ + V YY+ S+ A+QQ+RE+S LARQ+LE AI+RE Sbjct: 157 RAADAMLQSALASHDAAVQKALASVVASYYEVQSSSASQQAREKSQQLARQLLETAIRRE 216 Query: 216 QRGVGALPETLQARTFVARAELELARAIGQHKRALVALAVGLGLLGESEDVPALTLSSEV 275 QRGVG+LPETLQARTF+A+AELE ARA GQHK+A LA +GLL E++DVP LTL E Sbjct: 217 QRGVGSLPETLQARTFLAKAELEQARASGQHKKAQAMLAAAMGLLREAQDVPVLTLVPEQ 276 Query: 276 EEDPLGLEQNLPGWLQSARQYHPAILAARAQVEAAREKVKVARSEGLPTLDMSASRFVNG 335 EE P GLEQNLP WLQ+ARQYHPAILAARAQ+EAAREK++VARSEG+PTLD+SA ++ NG Sbjct: 277 EEYPDGLEQNLPAWLQAARQYHPAILAARAQLEAAREKLQVARSEGMPTLDLSARQYANG 336 Query: 336 RPNQGGGNRGDRETVVGLNLHIPIFDGFANGYKVDGAQAQLEMREAELREVQAQVLGDIA 395 RPNQ GNRGDRE +VGLNL +PIF+GFA YKV GAQAQ+E REAEL+EVQ QVLGDIA Sbjct: 337 RPNQ-AGNRGDRERMVGLNLTVPIFEGFARDYKVGGAQAQIEAREAELQEVQTQVLGDIA 395 Query: 396 TTYAEATTALRSMASARGLLEAAQRSVESVRRKYDTGAADIVEMLNAQTALADAELERIR 455 +TYAEA TAL S++S+R LL+AAQ +V+SVRRKYD GAADIVEMLNAQTAL++A+ ER++ Sbjct: 396 STYAEAMTALNSLSSSRRLLDAAQGAVDSVRRKYDAGAADIVEMLNAQTALSEADQERVK 455 Query: 456 ALGEWRSARLRLLANAGEMGRASFTKAAR 484 A+ +WRSARLRLLANAG MGR + AR Sbjct: 456 AMSDWRSARLRLLANAGRMGRWAVAGNAR 484 >ref|NP_521851.1| putative outer membrane CHANEL lipoprotein [Ralstonia solanacearum GMI1000] emb|CAD17441.1| probable typeIsecretion system, outer membrane chanel lipoprotein [Ralstonia solanacearum GMI1000] Length = 488 Score = 307 bits (786), Expect = 3e-81, Method: Composition-based stats. Identities = 198/444 (44%), Positives = 280/444 (63%), Gaps = 8/444 (1%) Query: 36 DPLLARPPELDKGKILPGDDRPTGCATSPFTPGKVLTLVDAVDLALCHQPQVQASWAAIK 95 DPL ARPP LD G +LP D +P C S L+L +AVDL LC+ PQV+A+WAAIK Sbjct: 41 DPLFARPPVLDTGAVLPSDAQPIPCPASG-DLAHPLSLSEAVDLGLCNNPQVKAAWAAIK 99 Query: 96 LQSSQLGEARAAYLPTLGAGVGQYR---ESATSDQGSSKRSIGTLYATLTWRLLDFGGRS 152 +Q+ +GEARAAYLPTL + E + +S + T+Y L+WRL DFG RS Sbjct: 100 IQAGAVGEARAAYLPTLTGSLSAMHTRNEFPDRPEANSTSNGHTVYLGLSWRLFDFGARS 159 Query: 153 ANQRAADVLLQAASASQDATLQKAMGNAVGLYYDAHSARAAQQSRERSLALARQILEAAI 212 AN+ AA++LL AA + DA LQK + + VG Y+DA + +AA Q+R + LAR +EA Sbjct: 160 ANREAANLLLAAAISGHDAALQKVLASVVGAYFDALTQQAAMQARTEATRLARDTVEATE 219 Query: 213 KREQRGVGALPETLQARTFVARAELELARAIGQHKRALVALAVGLGLLGESEDVPALTLS 272 +RE+RG +TLQART A+A+L RA+ ++AL ALA LGL + A L+ Sbjct: 220 RRERRGAAGQSDTLQARTAFAKAQLAEQRAVADFRKALSALAYALGLQPGTAFQLA-ELN 278 Query: 273 SEVEEDPLGLEQNLPGWLQSARQYHPAILAARAQVEAAREKVKVARSEGLPTLDMSASRF 332 + +G L WL A HP I +ARAQ +AA +V R+EGLPT+D++A+ + Sbjct: 279 DATDSQSVG---ELARWLDEAAARHPGIASARAQWDAANARVAKTRAEGLPTIDLTANFY 335 Query: 333 VNGRPNQGGGNRGDRETVVGLNLHIPIFDGFANGYKVDGAQAQLEMREAELREVQAQVLG 392 NG PNQG + + + VGL L IP+F+GFA YK+ GA+AQ E EA+ + + Q+L Sbjct: 336 QNGYPNQGLQSTRNNVSTVGLTLTIPLFEGFARTYKIRGAEAQAEQSEAQYEDTKNQILS 395 Query: 393 DIATTYAEATTALRSMASARGLLEAAQRSVESVRRKYDTGAADIVEMLNAQTALADAELE 452 D+ +A+A A+ ++ ++ L+ +AQ S+ S ++Y GAAD++E+L+ Q+AL DA E Sbjct: 396 DVIKVHADAVAAVDNLRASDVLIRSAQASMVSSEKRYAKGAADVLELLSTQSALMDAMQE 455 Query: 453 RIRALGEWRSARLRLLANAGEMGR 476 R+R L EWR+ARLRL+A AG +GR Sbjct: 456 RVRCLSEWRAARLRLMATAGVLGR 479 >ref|YP_003747520.1| Outer membrane efflux protein precursor [Ralstonia solanacearum CFBP2957] emb|CBJ53103.1| putative Outer membrane efflux protein precursor [Ralstonia solanacearum CFBP2957] Length = 494 Score = 305 bits (780), Expect = 1e-80, Method: Composition-based stats. Identities = 192/444 (43%), Positives = 274/444 (61%), Gaps = 8/444 (1%) Query: 36 DPLLARPPELDKGKILPGDDRPTGCATSPFTPGKVLTLVDAVDLALCHQPQVQASWAAIK 95 DPL ARPP LD G +LP D +P C L L +AVDL LC+ PQV+A+WAAIK Sbjct: 47 DPLFARPPVLDTGAVLPSDAQPIPCPARG-DLAAPLALAEAVDLGLCNNPQVKATWAAIK 105 Query: 96 LQSSQLGEARAAYLPTLGAGVGQYR---ESATSDQGSSKRSIGTLYATLTWRLLDFGGRS 152 +Q+ +GEARAAYLPTL + E + ++ T+Y L+WRL DFG RS Sbjct: 106 IQAGAVGEARAAYLPTLTGSLSAMHTRNEFPDRPEANTSSDGHTVYLGLSWRLFDFGARS 165 Query: 153 ANQRAADVLLQAASASQDATLQKAMGNAVGLYYDAHSARAAQQSRERSLALARQILEAAI 212 AN+ AA+++L AA + DA LQK + VG Y+DA + +AA Q+R + LAR +EA Sbjct: 166 ANREAANLMLAAAISGHDAALQKVLAAVVGAYFDALTQQAAMQARAEATRLARDTVEATE 225 Query: 213 KREQRGVGALPETLQARTFVARAELELARAIGQHKRALVALAVGLGLLGESEDVPALTLS 272 +RE+RG +TLQART A+A+L RA ++AL AL LGL + A L+ Sbjct: 226 RRERRGAAGQSDTLQARTAFAKAQLAEQRATADFRKALSALGYALGLPAGATFQLA-ELN 284 Query: 273 SEVEEDPLGLEQNLPGWLQSARQYHPAILAARAQVEAAREKVKVARSEGLPTLDMSASRF 332 + +G L WL A HP I +ARAQ +AA+ +V R+EGLPT+D +A+ + Sbjct: 285 DATDSQSVG---ELARWLDEAAARHPGIASARAQWDAAKARVDKTRAEGLPTVDFTANFY 341 Query: 333 VNGRPNQGGGNRGDRETVVGLNLHIPIFDGFANGYKVDGAQAQLEMREAELREVQAQVLG 392 NG PNQG + + + +GL L IP+F+GF+ YK+ GA+AQ E EA+ + + Q+L Sbjct: 342 QNGYPNQGLQSTRNNVSTIGLTLTIPLFEGFSRTYKIRGAEAQAEQSEAQYEDTKNQILS 401 Query: 393 DIATTYAEATTALRSMASARGLLEAAQRSVESVRRKYDTGAADIVEMLNAQTALADAELE 452 D+ +A+A A+ ++ ++ L+ +AQ S+ S ++Y GAAD++E+L+ Q+AL DA E Sbjct: 402 DVIKVHADAVAAVDNLQASDVLIRSAQASMVSSEKRYAKGAADVLELLSTQSALTDAMQE 461 Query: 453 RIRALGEWRSARLRLLANAGEMGR 476 R+R L EWR+ARLRL+A AG +GR Sbjct: 462 RVRCLSEWRAARLRLMATAGVLGR 485 >ref|YP_902031.1| outer membrane efflux protein [Pelobacter propionicus DSM 2379] gb|ABK99973.1| outer membrane efflux protein [Pelobacter propionicus DSM 2379] Length = 495 Score = 304 bits (779), Expect = 2e-80, Method: Composition-based stats. Identities = 200/475 (42%), Positives = 294/475 (61%), Gaps = 11/475 (2%) Query: 12 AVTALILMVSLLAAPTGAAPPARFDPLLARPPELDKGKILPGDDRPTGCATSPFTPGKVL 71 A+ ++ L SL A A P DPL P + G LPGD P C + L Sbjct: 27 AIASIALFASLPALAFDPAAPFD-DPLRTLPGRIASGTTLPGDGGPVACPVTRDLAAP-L 84 Query: 72 TLVDAVDLALCHQPQVQASWAAIKLQSSQLGEARAAYLPTLGAGVGQYRESAT---SDQG 128 +L+DA DLALC+ PQ++A+WAAIKLQS+++G+ARAAYLPTL + R + S Sbjct: 85 SLIDAADLALCNNPQIKAAWAAIKLQSAEVGQARAAYLPTLSGTINFMRTHYSYPGSGVA 144 Query: 129 SSKRSIGTLYATLTWRLLDFGGRSANQRAADVLLQAASASQDATLQKAMGNAVGLYYDAH 188 S+ T+ ATL WRL DFGGR+AN+ +A+ +L AA A DA LQK + + + Y+DA Sbjct: 145 STTEDGTTINATLGWRLFDFGGRAANRESANKMLVAALAQHDAALQKKLADVIQSYFDAV 204 Query: 189 SARAAQQSRERSLALARQILEAAIKREQRGVGALPETLQARTFVARAELELARAIGQHKR 248 +A+A+ ++E++ ++A LE A +RE RGV + + LQA T +ARA L+ RA G +++ Sbjct: 205 TAQASLHAKEQNESIAVNTLETAQRREDRGVVSRSDRLQAATALARATLDRNRAQGAYQK 264 Query: 249 ALVALAVGLGLLGESEDVPALTLSSEVEEDPLGLEQN--LPGWLQSARQYHPAILAARAQ 306 A+ L LG+ + A+ L E+ D E++ L WL+ A + HP++LA RAQ Sbjct: 265 AVAVLVYVLGIPTRT----AIALPDELNGDFAESEESKTLDDWLKLAAKTHPSLLAGRAQ 320 Query: 307 VEAAREKVKVARSEGLPTLDMSASRFVNGRPNQGGGNRGDRETVVGLNLHIPIFDGFANG 366 E++ K+ RSEGLPT+D SA+ + NG P QG R T +GL+L P FDGF+ Sbjct: 321 WESSVRKIAATRSEGLPTVDFSANYYQNGYPGQGLSRTDSRITTIGLSLTFPFFDGFSRT 380 Query: 367 YKVDGAQAQLEMREAELREVQAQVLGDIATTYAEATTALRSMASARGLLEAAQRSVESVR 426 YK+ A+AQ E + AE++E + L ++ +A+A ++L+++ +++ LL+ A+ S+ + Sbjct: 381 YKIRNAEAQAEQQHAEVQETEQNTLMEVVKAHADAGSSLQNLQASKKLLDIAEASLAVSQ 440 Query: 427 RKYDTGAADIVEMLNAQTALADAELERIRALGEWRSARLRLLANAGEMGRASFTK 481 RKY+ GAADI+E+LN Q ALADA ERIR+L EWRSA+LRLLA G +GR + Sbjct: 441 RKYEKGAADILEVLNTQAALADARQERIRSLAEWRSAKLRLLACVGVLGRGELER 495 >emb|CCA87572.1| putative Outer membrane efflux protein precursor [Ralstonia syzygii R24] Length = 494 Score = 303 bits (777), Expect = 3e-80, Method: Composition-based stats. Identities = 199/444 (44%), Positives = 276/444 (62%), Gaps = 8/444 (1%) Query: 36 DPLLARPPELDKGKILPGDDRPTGCATSPFTPGKVLTLVDAVDLALCHQPQVQASWAAIK 95 DPL ARPP LD G +LP D +P C L L +AVDL LC+ PQV+A+WAAIK Sbjct: 47 DPLFARPPVLDTGAVLPSDAQPIPCPARGDLTAP-LALGEAVDLGLCNNPQVKAAWAAIK 105 Query: 96 LQSSQLGEARAAYLPTLGAGVGQYR---ESATSDQGSSKRSIGTLYATLTWRLLDFGGRS 152 +Q+ +GEARAAYLPTL + R E + +S S T+Y WRL DFG RS Sbjct: 106 IQAGAVGEARAAYLPTLTGSLSAMRTRNEFPERPEANSTSSGHTVYLGFNWRLFDFGARS 165 Query: 153 ANQRAADVLLQAASASQDATLQKAMGNAVGLYYDAHSARAAQQSRERSLALARQILEAAI 212 AN++AAD+LL AA + DA LQK + + VG Y+DA + +AA Q+R + LAR +EA Sbjct: 166 ANRKAADLLLAAAISGHDAALQKVLASVVGAYFDALTQQAAMQARAEATRLARDTVEATE 225 Query: 213 KREQRGVGALPETLQARTFVARAELELARAIGQHKRALVALAVGLGLLGESEDVPALTLS 272 +RE+RG +TLQART A+A+L RA+ ++AL ALA LGL + A L+ Sbjct: 226 RRERRGAAGQSDTLQARTAFAKAQLAEQRAMADFRKALSALAYALGLRPGTAFQLA-ELN 284 Query: 273 SEVEEDPLGLEQNLPGWLQSARQYHPAILAARAQVEAAREKVKVARSEGLPTLDMSASRF 332 + +G L WL A HP I AAR Q +AA +V R+EGLPTLD +A+ + Sbjct: 285 DATDSQSVG---ELARWLDEAAARHPGIAAARVQWDAANARVAKTRAEGLPTLDFTANFY 341 Query: 333 VNGRPNQGGGNRGDRETVVGLNLHIPIFDGFANGYKVDGAQAQLEMREAELREVQAQVLG 392 NG PNQG N + + VG+ L IP+F+GF+ YK+ GA+AQ E EA+ + + Q+L Sbjct: 342 QNGYPNQGLQNTRNNVSTVGVTLTIPLFEGFSRTYKIRGAEAQAEQSEAQYEDTKNQILS 401 Query: 393 DIATTYAEATTALRSMASARGLLEAAQRSVESVRRKYDTGAADIVEMLNAQTALADAELE 452 D+ +A+A A+ ++ ++ L+ +AQ ++ S ++Y GAAD++E+L+ Q+AL DA E Sbjct: 402 DVIKVHADAVAAVDNLQASDVLIRSAQAAMVSSEKRYAKGAADMLELLSTQSALIDAMQE 461 Query: 453 RIRALGEWRSARLRLLANAGEMGR 476 R+R L EWRSARLRL+A AG +GR Sbjct: 462 RVRCLSEWRSARLRLMATAGVLGR 485