BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3338.p (243 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776186.1| hypothetical protein Hsero_2783 [Herbaspiril... 362 2e-98 ref|YP_001352952.1| hypothetical protein mma_1262 [Janthinobacte... 348 4e-94 ref|YP_001100486.1| hypothetical protein HEAR2228 [Herminiimonas... 341 4e-92 ref|YP_004753766.1| putative lipoprotein [Collimonas fungivorans... 329 2e-88 ref|ZP_07045746.1| putative lipoprotein [Comamonas testosteroni ... 304 9e-81 >ref|YP_003776186.1| hypothetical protein Hsero_2783 [Herbaspirillum seropedicae SmR1] gb|ADJ64278.1| hypothetical protein Hsero_2783 [Herbaspirillum seropedicae SmR1] Length = 202 Score = 362 bits (930), Expect = 2e-98, Method: Composition-based stats. Identities = 188/202 (93%), Positives = 195/202 (96%) Query: 42 MGQSDSNRVATLAMRANLDSLYLLMSKLYRRNPAEWKKTAGSRDEAEKKVKLAIEQRQAW 101 MGQSD+NRVATLAMRANLDSLYLLMSKLYRRNPAEWKKTA +R+EAEKKV+ AIE+RQAW Sbjct: 1 MGQSDTNRVATLAMRANLDSLYLLMSKLYRRNPAEWKKTAATREEAEKKVRQAIEERQAW 60 Query: 102 PELQGKRDIQAMTLALSPEFKGDRVAAFIDATADMIIVAHGNKIEFFLVDGLDAQHLYNA 161 PELQGKRDIQAMTLALS EFKGDRVAAFIDATADMIIVAH NKIEFFLVDGLDAQHLYNA Sbjct: 61 PELQGKRDIQAMTLALSSEFKGDRVAAFIDATADMIIVAHDNKIEFFLVDGLDAQHLYNA 120 Query: 162 ARNVEIAAWILSSRRNATGAPLLLSDEIGSEARNLSFEREFGKIVGRLDLMAEFMTERYR 221 ARNVEIAAWIL+SRR A GAPLLLSDEIG +ARNLSFEREFGKIVGRLDLMAEFMTERYR Sbjct: 121 ARNVEIAAWILASRRTAAGAPLLLSDEIGEQARNLSFEREFGKIVGRLDLMAEFMTERYR 180 Query: 222 RAGISYVQNLLGGSFLQFLPVR 243 RAGISYVQNLLGGSFLQFLPVR Sbjct: 181 RAGISYVQNLLGGSFLQFLPVR 202 >ref|YP_001352952.1| hypothetical protein mma_1262 [Janthinobacterium sp. Marseille] gb|ABR91108.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 241 Score = 348 bits (893), Expect = 4e-94, Method: Composition-based stats. Identities = 165/232 (71%), Positives = 200/232 (86%), Gaps = 1/232 (0%) Query: 13 LLCA-ALLAGCASAPAPHGEVKGAEASSREMGQSDSNRVATLAMRANLDSLYLLMSKLYR 71 CA A+L GC++ PAP GEVKG AS +EMGQSD+NR+AT+AMR NL+SLYLLM KLYR Sbjct: 10 FFCACAVLTGCSTTPAPRGEVKGMSASGKEMGQSDTNRIATIAMRDNLESLYLLMDKLYR 69 Query: 72 RNPAEWKKTAGSRDEAEKKVKLAIEQRQAWPELQGKRDIQAMTLALSPEFKGDRVAAFID 131 RNPAEW+KT SR+E+ K+V+ A+EQRQ WP LQG+RDI+A++LAL+P+F GDRVAA I Sbjct: 70 RNPAEWRKTGISREESIKRVREAVEQRQPWPGLQGQRDIKALSLALTPDFAGDRVAALIY 129 Query: 132 ATADMIIVAHGNKIEFFLVDGLDAQHLYNAARNVEIAAWILSSRRNATGAPLLLSDEIGS 191 ++ADMII AH K EFFL+DGLDAQH+YNAARN+EIA W+L SRRN++G LLL+D+I Sbjct: 130 SSADMIIAAHDGKTEFFLIDGLDAQHIYNAARNIEIAVWLLGSRRNSSGKVLLLADDISE 189 Query: 192 EARNLSFEREFGKIVGRLDLMAEFMTERYRRAGISYVQNLLGGSFLQFLPVR 243 RNLSFEREFGK+VGRLDLMAEF+TE+YRRAGI+YVQNL+GGSFLQFLPVR Sbjct: 190 NGRNLSFEREFGKVVGRLDLMAEFLTEKYRRAGITYVQNLIGGSFLQFLPVR 241 >ref|YP_001100486.1| hypothetical protein HEAR2228 [Herminiimonas arsenicoxydans] emb|CAL62363.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 244 Score = 341 bits (875), Expect = 4e-92, Method: Composition-based stats. Identities = 171/244 (70%), Positives = 201/244 (82%), Gaps = 4/244 (1%) Query: 3 RKLFHILPLPLLCAALLAGCAS---APAPHGEVKGAEASSREMGQSDSNRVATLAMRANL 59 ++L + L +CAAL GC++ A HGEVKGA S REMGQSD+NR+ATL MR NL Sbjct: 2 QRLRCVYVLLCMCAAL-TGCSTMDTASNKHGEVKGASISGREMGQSDTNRIATLGMRNNL 60 Query: 60 DSLYLLMSKLYRRNPAEWKKTAGSRDEAEKKVKLAIEQRQAWPELQGKRDIQAMTLALSP 119 DSLYLLM KLYRRNP EWKKTA SRDE+ K+V+ AIEQRQ W EL+G+RDI+A++LAL+ Sbjct: 61 DSLYLLMEKLYRRNPGEWKKTAASRDESIKRVRDAIEQRQPWTELRGQRDIKALSLALTS 120 Query: 120 EFKGDRVAAFIDATADMIIVAHGNKIEFFLVDGLDAQHLYNAARNVEIAAWILSSRRNAT 179 EF GDRVAAFI A+ADMII AH K EFFLVDGLDAQHLYNAARN+EIA W+L++RRN Sbjct: 121 EFNGDRVAAFIYASADMIIAAHDGKTEFFLVDGLDAQHLYNAARNIEIAVWLLANRRNTE 180 Query: 180 GAPLLLSDEIGSEARNLSFEREFGKIVGRLDLMAEFMTERYRRAGISYVQNLLGGSFLQF 239 G LLLSD +G RNLSFEREFGKIVGRLDL+A F+TE+YRRAGI+Y+QN++GGSFLQF Sbjct: 181 GKILLLSDNMGESGRNLSFEREFGKIVGRLDLLAVFITEKYRRAGINYIQNMIGGSFLQF 240 Query: 240 LPVR 243 LPVR Sbjct: 241 LPVR 244 >ref|YP_004753766.1| putative lipoprotein [Collimonas fungivorans Ter331] gb|AEK62943.1| putative lipoprotein [Collimonas fungivorans Ter331] Length = 258 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 162/237 (68%), Positives = 193/237 (81%), Gaps = 2/237 (0%) Query: 9 LPLPLLCAALLAGC--ASAPAPHGEVKGAEASSREMGQSDSNRVATLAMRANLDSLYLLM 66 LP+ LLC L A A PAPHGEV+G+ S E+ QSD NR ATL MR NLDSLY L+ Sbjct: 22 LPIGLLCLTLSACSMLAPTPAPHGEVQGSSTSGSELAQSDVNRFATLGMRDNLDSLYRLL 81 Query: 67 SKLYRRNPAEWKKTAGSRDEAEKKVKLAIEQRQAWPELQGKRDIQAMTLALSPEFKGDRV 126 KLYRRNPAEWKKTA SR+ A K+V+ AIE RQ+WPELQGK DIQA++LAL+P+F GDR Sbjct: 82 DKLYRRNPAEWKKTAASRELAIKRVRDAIEARQSWPELQGKHDIQALSLALAPDFGGDRA 141 Query: 127 AAFIDATADMIIVAHGNKIEFFLVDGLDAQHLYNAARNVEIAAWILSSRRNATGAPLLLS 186 AAFI ADMIIVAHG K F+L+DG DAQ+LYNAARN+EIA+WIL+SR+NA G PLLLS Sbjct: 142 AAFIYGAADMIIVAHGGKTRFYLIDGFDAQYLYNAARNMEIASWILNSRKNAAGQPLLLS 201 Query: 187 DEIGSEARNLSFEREFGKIVGRLDLMAEFMTERYRRAGISYVQNLLGGSFLQFLPVR 243 +++ RN+SFEREFGKI+GR+DL+AE TE+Y+RAGISY+QNL+GGSFLQFLPVR Sbjct: 202 NDMSESERNISFEREFGKIIGRIDLLAEMTTEKYKRAGISYMQNLVGGSFLQFLPVR 258 >ref|ZP_07045746.1| putative lipoprotein [Comamonas testosteroni S44] gb|EFI60557.1| putative lipoprotein [Comamonas testosteroni S44] Length = 263 Score = 304 bits (778), Expect = 9e-81, Method: Composition-based stats. Identities = 149/231 (64%), Positives = 183/231 (79%), Gaps = 2/231 (0%) Query: 13 LLCAALLAGCASAPAPHGEVKGAEASSREMGQSDSNRVATLAMRANLDSLYLLMSKLYRR 72 +LC LA C+SAP HGEVKG + SRE+ QSDSNR+ATLAM+ NL+SL+L+M KLYRR Sbjct: 35 VLCG--LAACSSAPTNHGEVKGEDFHSRELLQSDSNRMATLAMKENLESLFLIMDKLYRR 92 Query: 73 NPAEWKKTAGSRDEAEKKVKLAIEQRQAWPELQGKRDIQAMTLALSPEFKGDRVAAFIDA 132 NPAEWKKTA SR+ A V++A+ +RQ W ELQ KRD+ A++LAL PEF GDRVAAF+ A Sbjct: 93 NPAEWKKTASSREAAMTYVRIAVMERQPWHELQDKRDVAALSLALQPEFAGDRVAAFVHA 152 Query: 133 TADMIIVAHGNKIEFFLVDGLDAQHLYNAARNVEIAAWILSSRRNATGAPLLLSDEIGSE 192 ADM+I AHG + F L+DGLD QH++NAARN+EIA WIL+SR+ G PLLLS++I E Sbjct: 153 AADMLITAHGGRTSFTLIDGLDPQHVFNAARNLEIANWILNSRKTPGGKPLLLSNQIAEE 212 Query: 193 ARNLSFEREFGKIVGRLDLMAEFMTERYRRAGISYVQNLLGGSFLQFLPVR 243 RNLSFERE GKI+GRLDL+A++ TERYRR+ I Y Q LL G F+QFLPVR Sbjct: 213 GRNLSFEREMGKIIGRLDLVADYTTERYRRSVIGYAQGLLAGPFMQFLPVR 263