BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3320.p (537 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776170.1| hypothetical protein Hsero_2767 [Herbaspiril... 866 0.0 ref|ZP_08273606.1| hypothetical protein IMCC9480_1608 [Oxalobact... 472 e-130 ref|YP_001100140.1| hypothetical protein HEAR1864 [Herminiimonas... 462 e-128 ref|YP_001353141.1| hypothetical protein mma_1451 [Janthinobacte... 452 e-125 ref|YP_003377216.1| hypothetical protein XALc_2745 [Xanthomonas ... 348 2e-93 >ref|YP_003776170.1| hypothetical protein Hsero_2767 [Herbaspirillum seropedicae SmR1] gb|ADJ64262.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 534 Score = 866 bits (2238), Expect = 0.0, Method: Composition-based stats. Identities = 490/531 (92%), Positives = 509/531 (95%), Gaps = 3/531 (0%) Query: 1 MSKKPTTLTPVEIAREAFQRLGARRISPTPDAYRIAYEEIQGGMPGVTAESVLSTFATKL 60 MSKKP+TLTPVEIAREAFQRLGARRI+PTPDAYRIAYEEIQG PG +AESVL+ FATKL Sbjct: 1 MSKKPSTLTPVEIAREAFQRLGARRIAPTPDAYRIAYEEIQGDGPGASAESVLAAFATKL 60 Query: 61 SRQPGENGLLGTRLVRARENGDWTEFERQLIEFADANWQSRPIVPAKPAVPHGELVPIDL 120 SRQPGENGLLGTRLVRAREN DW EFERQLIEFA+ NWQ+RP+ P V HGELVPIDL Sbjct: 61 SRQPGENGLLGTRLVRARENNDWAEFERQLIEFAEENWQNRPL---GPQVQHGELVPIDL 117 Query: 121 ERQFIRDSIKEKMLREMLARILVFNLPSLLSTAPELANESRNSGQDLKMAFSEQAMNEII 180 ER+FIRDS KEKMLREMLAR+LVFNLPSLLSTAPELANESRNSGQ+LK AFSEQAMNEII Sbjct: 118 EREFIRDSKKEKMLREMLARVLVFNLPSLLSTAPELANESRNSGQELKTAFSEQAMNEII 177 Query: 181 TRVKQLSFQIELKTDDMAQQQELLMRLFQLLLENINGLLEQGSWLSSQIETVQSLIAGPL 240 R+KQLSFQIELKTDDMAQQQ+LLMRLFQLLLENINGLLEQGSWLSSQIETVQSLIAGPL Sbjct: 178 ARLKQLSFQIELKTDDMAQQQDLLMRLFQLLLENINGLLEQGSWLSSQIETVQSLIAGPL 237 Query: 241 SNTSLADATKNLKEVIYKQGLLKNTLSEEKVVVKNMMLTFVDRLSAMVSTTDNYQRTIRG 300 S TSLADATKNLKEVIYKQGLLKNTLSEEKVVVKNMMLTFVDRLSAMVSTTDNYQRTIRG Sbjct: 238 STTSLADATKNLKEVIYKQGLLKNTLSEEKVVVKNMMLTFVDRLSAMVSTTDNYQRTIRG 297 Query: 301 FSQQISQAGNIADLNSVLSEIMTETQKAQEEATRSRDAMVDARQEVEKAEERIQALEQQL 360 FSQQISQAGNIADLNSVLSEIMTETQKAQEEATRSRDAM DARQEVEKAEERIQ LEQQL Sbjct: 298 FSQQISQAGNIADLNSVLSEIMTETQKAQEEATRSRDAMEDARQEVEKAEERIQTLEQQL 357 Query: 361 QQMGELVREDQLTGSLNRRGMDESLDREIANALRRETPLCVALLDLDDFKRINDTHGHAT 420 QMGELVREDQLTGSLNRRGMDESLDREI NALRR+TPLCVALLDLDDFKRINDTHGHAT Sbjct: 358 LQMGELVREDQLTGSLNRRGMDESLDREITNALRRDTPLCVALLDLDDFKRINDTHGHAT 417 Query: 421 GDEVLVHLVQVIRETLRKLDVIARFGGEEFVILMPETSPQDAVQIITRVQRELTKRIFMH 480 GDEVLVH+VQVIRETLRKLDVIARFGGEEF++LMPET+PQDAVQIITRVQRELTKRIFMH Sbjct: 418 GDEVLVHMVQVIRETLRKLDVIARFGGEEFLVLMPETAPQDAVQIITRVQRELTKRIFMH 477 Query: 481 ESQRLLITFSAGVSVYHPGESQAELLKRTDVALYKAKNAGKNRIVFADPPA 531 ESQRLLITFSAGV+VYHPGESQA+LLKR DVALYKAKNAGKNRIVFADPPA Sbjct: 478 ESQRLLITFSAGVAVYHPGESQADLLKRADVALYKAKNAGKNRIVFADPPA 528 >ref|ZP_08273606.1| hypothetical protein IMCC9480_1608 [Oxalobacteraceae bacterium IMCC9480] gb|EGF32925.1| hypothetical protein IMCC9480_1608 [Oxalobacteraceae bacterium IMCC9480] Length = 527 Score = 472 bits (1214), Expect = e-130, Method: Composition-based stats. Identities = 272/530 (51%), Positives = 383/530 (72%), Gaps = 15/530 (2%) Query: 4 KPTTLTPVEIAREAFQRLGARRISPTPDAYRIAYEEIQGGMPGVTAESVLSTFATKLSRQ 63 +P P E+AREAF++L R+++PTPDAYR YEEI G G +AE+ L FA+ L Sbjct: 8 EPAVANPTELAREAFRQLAVRKMAPTPDAYRQVYEEIAGTAAGPSAENTLIQFASALRLL 67 Query: 64 PGE----NGLLGTRLVRARENGDWTEFERQLIEFADANWQSRPIVPAKPA-VPHGELVPI 118 E NG G R A DWT + L A+ A PA VP +VP Sbjct: 68 ATELDDINGF-GKRFELAASARDWTAYNSALSALTAAHLTRFDRTQAAPALVPEASVVP- 125 Query: 119 DLERQFIRDSIKEKMLREMLARILVFNLPSLLSTAPELANESRNSGQDLKMAFSEQAMNE 178 D + ++LR++L+R L+ + +LLS++PELA+E+ + G+ +K A +E ++NE Sbjct: 126 --------DDRQPRLLRDLLSRTLLLAVAALLSSSPELADEAESLGRAVKEAQTEDSLNE 177 Query: 179 IITRVKQLSFQIELKTDDMAQQQELLMRLFQLLLENINGLLEQGSWLSSQIETVQSLIAG 238 + R++QL F+IE++ D+A++QELL+RLF+LLLENI+GL E+ SWL QI++V L++G Sbjct: 178 VGLRLRQLCFKIEMRAGDVAEEQELLLRLFRLLLENISGLTEEDSWLHGQIDSVHQLLSG 237 Query: 239 PLSNTSLADATKNLKEVIYKQGLLKNTLSEEKVVVKNMMLTFVDRLSAMVSTTDNYQRTI 298 P+++ +L DAT+++K+VIYKQG L+++L+E KV VKNMM+TF+DRL A+ ++T +Y I Sbjct: 238 PINHHALQDATRDMKDVIYKQGTLRHSLTEAKVTVKNMMITFIDRLGALATSTGDYHEKI 297 Query: 299 RGFSQQISQAGNIADLNSVLSEIMTETQKAQEEATRSRDAMVDARQEVEKAEERIQALEQ 358 +SQ+ISQA +I LN++L ++M +T++AQ +A +SRD M+ ARQ E AE+RI LE Sbjct: 298 DAYSQKISQASDITTLNAILEDVMRDTRQAQYDALQSRDDMIVARQAGEAAEQRIHDLES 357 Query: 359 QLQQMGELVREDQLTGSLNRRGMDESLDREIANALRRETPLCVALLDLDDFKRINDTHGH 418 +L M ELVREDQLTGSLNRRG+D+ DRE+A A RR++PLC+A+LDLDDFKR+NDTHGH Sbjct: 358 KLAAMSELVREDQLTGSLNRRGLDDVFDRELARADRRKSPLCIAMLDLDDFKRLNDTHGH 417 Query: 419 ATGDEVLVHLVQVIRETLRKLDVIARFGGEEFVILMPETSPQDAVQIITRVQRELTKRIF 478 GDE LV+LV+VI++TLR +DV+ARFGGEEF+IL+P+T+ DA Q +TR+QRELTKRIF Sbjct: 418 VAGDEALVYLVRVIKDTLRTMDVLARFGGEEFLILLPDTTMDDATQTVTRLQRELTKRIF 477 Query: 479 MHESQRLLITFSAGVSVYHPGESQAELLKRTDVALYKAKNAGKNRIVFAD 528 MH ++R+LITFSAGV++ E Q +LKR D ALY+AK AGKNR+V A+ Sbjct: 478 MHNNERILITFSAGVALRKGNEDQVGMLKRADTALYQAKRAGKNRVVSAE 527 >ref|YP_001100140.1| hypothetical protein HEAR1864 [Herminiimonas arsenicoxydans] emb|CAL62016.1| Conserved hypothetical protein, putative GGDEF domain [Herminiimonas arsenicoxydans] Length = 524 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 273/530 (51%), Positives = 367/530 (69%), Gaps = 11/530 (2%) Query: 1 MSKKPTTLTPVEIAREAFQRLGARRISPTPDAYRIAYEEIQGGMPGVTAESVLSTFATKL 60 M KPT P EIAREAF++L R+I+PTPDAYR Y+EI G +AE VL FA L Sbjct: 1 MPDKPTQ-NPAEIAREAFRQLATRKIAPTPDAYRKIYDEIAGYAIQPSAEEVLGEFAGTL 59 Query: 61 SRQPGENGLLGTRLVRARENGDWTEFER---QLIEFADANWQSRPIVPAKPAVPHGELVP 117 P + LG L A W +F + QLI+ +R + G +P Sbjct: 60 LSAP-DLAPLGKALQEAAATSYWPDFSKGLEQLIKHYQTQLSARSTTVSSTNNVAGSTLP 118 Query: 118 IDLERQFIRDSIKEKMLREMLARILVFNLPSLLSTAPELANESRNSGQDLKMAFSEQAMN 177 + D + +LR++L R L + SLL APELA ES G+ +K A SE A+N Sbjct: 119 S------LIDDPQPALLRDLLMRTLTLAVASLLQGAPELAEESEALGRSIKEAQSEAALN 172 Query: 178 EIITRVKQLSFQIELKTDDMAQQQELLMRLFQLLLENINGLLEQGSWLSSQIETVQSLIA 237 E+ R+KQL F+IELK+ DMA+Q ELL+RLF+LLLENI+GL++ SW+ QIE VQ+LI Sbjct: 173 EVSVRLKQLCFKIELKSGDMAEQHELLLRLFKLLLENISGLIDDDSWMHGQIEAVQNLII 232 Query: 238 GPLSNTSLADATKNLKEVIYKQGLLKNTLSEEKVVVKNMMLTFVDRLSAMVSTTDNYQRT 297 GP+++ +L + ++LKEVIYKQG L+N+L E K VK+MM+TF+DRL + +TT NY + Sbjct: 233 GPINDIALREVMRSLKEVIYKQGTLRNSLVEAKDTVKDMMITFIDRLGEIATTTGNYHKK 292 Query: 298 IRGFSQQISQAGNIADLNSVLSEIMTETQKAQEEATRSRDAMVDARQEVEKAEERIQALE 357 I +S+QI +++ L+ +L E+M ET+ AQ EA RSRDA++ AR+ VE AE RI LE Sbjct: 293 IDKYSKQIIATADVSKLSKILDEVMKETRIAQSEALRSRDAILAARKNVEDAEARIHNLE 352 Query: 358 QQLQQMGELVREDQLTGSLNRRGMDESLDREIANALRRETPLCVALLDLDDFKRINDTHG 417 +L+QM ELVREDQLTGSLNRRG+++ +RE+A A RR TPLC+A+LDLDDFK+IND +G Sbjct: 353 TKLEQMSELVREDQLTGSLNRRGLEDIFERELARAERRGTPLCIAMLDLDDFKKINDKYG 412 Query: 418 HATGDEVLVHLVQVIRETLRKLDVIARFGGEEFVILMPETSPQDAVQIITRVQRELTKRI 477 H+ GDE L+HLV+VI+ETLR +DVIARFGGEEF+I++P+T +AVQ +TR+QRELTK+I Sbjct: 413 HSAGDEALIHLVRVIKETLRSMDVIARFGGEEFLIVLPDTGMDEAVQTVTRLQRELTKQI 472 Query: 478 FMHESQRLLITFSAGVSVYHPGESQAELLKRTDVALYKAKNAGKNRIVFA 527 FMH RLL+TFSAGV++ + E Q +++R D ALY+AK GKNR+V A Sbjct: 473 FMHNHTRLLMTFSAGVALRNEREDQRAMIERADKALYEAKRTGKNRVVAA 522 >ref|YP_001353141.1| hypothetical protein mma_1451 [Janthinobacterium sp. Marseille] gb|ABR91195.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 528 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 264/518 (50%), Positives = 371/518 (71%), Gaps = 2/518 (0%) Query: 10 PVEIAREAFQRLGARRISPTPDAYRIAYEEIQGGMPGVTAESVLSTFATKLSRQPGENGL 69 P EIAREAF++L RRI+PTPDAYR Y+EI G T E +L+ FA LS P + Sbjct: 12 PAEIAREAFRQLAVRRIAPTPDAYRAIYDEIAGYAVQPTPEEILAEFAASLSTAPDGVAI 71 Query: 70 LGTRLVRARENGDWTEFERQLIEFADANWQSRPIVPAKPAVPHGELVPIDLERQFIRDSI 129 +G L A W +F + L + ++Q++ + A + +V + + + D Sbjct: 72 IGKTLQEAATTSYWPDFSKGLAQLVK-HYQTQLAIQANSSAAVAPVVQ-NTQSLSLVDDP 129 Query: 130 KEKMLREMLARILVFNLPSLLSTAPELANESRNSGQDLKMAFSEQAMNEIITRVKQLSFQ 189 + +LR++L R L + SLL AP+LA E+ G+ +K A +E ++NE+ ++KQL F+ Sbjct: 130 QPALLRDLLTRTLTLAVASLLQGAPDLAAEAEALGRSVKDANTEASLNEVSVKLKQLCFK 189 Query: 190 IELKTDDMAQQQELLMRLFQLLLENINGLLEQGSWLSSQIETVQSLIAGPLSNTSLADAT 249 IELK+ DMAQQ E+L+RLF+LLLENI GLLE SW+ QIE V++LI+ P+++ +L + Sbjct: 190 IELKSGDMAQQHEMLLRLFRLLLENIGGLLEHDSWMHGQIEAVRNLISAPINDVALNEVM 249 Query: 250 KNLKEVIYKQGLLKNTLSEEKVVVKNMMLTFVDRLSAMVSTTDNYQRTIRGFSQQISQAG 309 ++LKEVIYKQG LKN++++ KV VKNM+ TF+DRL+ + +TT NY + I +S++I+Q Sbjct: 250 RSLKEVIYKQGTLKNSINDAKVSVKNMVNTFIDRLADIANTTGNYHQQIDRYSKEITQTA 309 Query: 310 NIADLNSVLSEIMTETQKAQEEATRSRDAMVDARQEVEKAEERIQALEQQLQQMGELVRE 369 +I L+ +L E+ ET+ AQ EA RSRD ++ AR++VE AE RI LE QL+QM ELVRE Sbjct: 310 DINKLSKILDEVKRETRIAQTEALRSRDIVLAARKDVEDAEARIHNLELQLEQMSELVRE 369 Query: 370 DQLTGSLNRRGMDESLDREIANALRRETPLCVALLDLDDFKRINDTHGHATGDEVLVHLV 429 DQLTGSLNRRG+D+ L+REIA A RR +PLC+A+LDLDDFK+IND +GH GDE L+HLV Sbjct: 370 DQLTGSLNRRGLDDVLEREIARADRRASPLCIAMLDLDDFKKINDKYGHMAGDEALIHLV 429 Query: 430 QVIRETLRKLDVIARFGGEEFVILMPETSPQDAVQIITRVQRELTKRIFMHESQRLLITF 489 +VI++TLR +DVIARFGGEEF+I++P+T ++A+ ITR+QRELTK+IFMH RLL+TF Sbjct: 430 RVIKDTLRTMDVIARFGGEEFLIVLPDTPLEEAILTITRLQRELTKQIFMHNHTRLLMTF 489 Query: 490 SAGVSVYHPGESQAELLKRTDVALYKAKNAGKNRIVFA 527 SAGV++ E QA ++KR D+ALY+AK AGKNR++ A Sbjct: 490 SAGVALRKEREDQAAMVKRADIALYEAKKAGKNRVIPA 527 >ref|YP_003377216.1| hypothetical protein XALc_2745 [Xanthomonas albilineans GPE PC73] emb|CBA17222.1| conserved hypothetical protein [Xanthomonas albilineans] Length = 537 Score = 348 bits (892), Expect = 2e-93, Method: Composition-based stats. Identities = 211/477 (44%), Positives = 302/477 (63%), Gaps = 18/477 (3%) Query: 52 VLSTFATKLSRQPGENGLLGTRLVRARENGDWTEFERQLIEFADANWQSRPIVPAKPAVP 111 +L FA ++ GE G +G RL A +GDW + R L + D ++ Sbjct: 79 LLGAFADGMAGLHGELGDMGRRLQSAASSGDWPSYGRALRQLIDKYIRT----------- 127 Query: 112 HGELVPIDLERQFIRDSIKEKMLREMLARILVFNLPSLLSTAPELANESRNSGQDLKMAF 171 ID++ S E+ LR++L + + L SLL T PELANE+ SG+ ++ Sbjct: 128 ------IDVDDPLAGPSDSER-LRDLLRQTVAGALASLLHTLPELANEAEASGEAVRQWQ 180 Query: 172 SEQAMNEIITRVKQLSFQIELKTDDMAQQQELLMRLFQLLLENINGLLEQGSWLSSQIET 231 Q++ + RV++L QI L+ +D +QQ LL+ LF LLLENI LL+ SWL QI Sbjct: 181 PGQSLEPVAQRVRELCHQIALRANDSQEQQTLLLSLFDLLLENIGELLDDTSWLQGQIAV 240 Query: 232 VQSLIAGPLSNTSLADATKNLKEVIYKQGLLKNTLSEEKVVVKNMMLTFVDRLSAMVSTT 291 V+ LI GPL S+ +A NL+EVIYKQGLLK +++E K +K MM++FV+ L+ M ++T Sbjct: 241 VRDLIVGPLDRYSIEEARGNLREVIYKQGLLKQSIAESKEAMKGMMVSFVEELNGMATST 300 Query: 292 DNYQRTIRGFSQQISQAGNIADLNSVLSEIMTETQKAQEEATRSRDAMVDARQEVEKAEE 351 + I +SQ I A +IADLN +L E++ +T Q++A ++RD ++ ARQ+VE AE+ Sbjct: 301 GEFHDRIADYSQTIRDARSIADLNRLLQEVLQDTGHVQQQALQARDHLIAARQDVEAAEQ 360 Query: 352 RIQALEQQLQQMGELVREDQLTGSLNRRGMDESLDREIANALRRETPLCVALLDLDDFKR 411 RI LEQ+L+ + +LV DQLTGSLNRRG+DE RE+ R PLCVA+LD+DDF+ Sbjct: 361 RILHLEQELRDVSDLVGVDQLTGSLNRRGLDELFARELVRTERSAQPLCVAMLDMDDFRT 420 Query: 412 INDTHGHATGDEVLVHLVQVIRETLRKLDVIARFGGEEFVILMPETSPQDAVQIITRVQR 471 +N T+GHA GD L H+V+V R TLR D IARFGGEEF++LMP+ + +A + RV R Sbjct: 421 LNATYGHAGGDAALRHVVEVARTTLRASDAIARFGGEEFLLLMPDCTIFEANAAVNRVLR 480 Query: 472 ELTKRIFMHESQRLLITFSAGVSVYHPGESQAELLKRTDVALYKAKNAGKNRIVFAD 528 L++R HE QR+ ++FSAGV++ GE+Q L++R D A+Y+AK AGKN +V AD Sbjct: 481 ALSQRALTHEDQRVFVSFSAGVAMRAAGENQDALVRRADRAMYEAKKAGKNCVVSAD 537