BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3290.p (233 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776105.1| hypothetical protein Hsero_2701 [Herbaspiril... 304 7e-81 ref|YP_004040647.1| hypothetical protein MPQ_2265 [Methylovorus ... 204 8e-51 ref|YP_003052076.1| hypothetical protein Msip34_2307 [Methylovor... 203 2e-50 ref|YP_003673766.1| hypothetical protein M301_0805 [Methylotener... 202 3e-50 ref|YP_003048528.1| hypothetical protein Mmol_1093 [Methylotener... 197 8e-49 >ref|YP_003776105.1| hypothetical protein Hsero_2701 [Herbaspirillum seropedicae SmR1] gb|ADJ64197.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 204 Score = 304 bits (779), Expect = 7e-81, Method: Composition-based stats. Identities = 156/180 (86%), Positives = 166/180 (92%), Gaps = 1/180 (0%) Query: 55 VSVQVLDSAGQPVPNAVVYAEPAGGGGAIKAA-RQVEIEQKNKTFIPLVTVVQTGTAILF 113 VSVQVLD+AGQP+PNAVVY EPAG A RQVEIEQKNKTF+PLVTVVQTGT ILF Sbjct: 25 VSVQVLDAAGQPMPNAVVYVEPAGAAAPPAKAPRQVEIEQKNKTFMPLVTVVQTGTPILF 84 Query: 114 PNHDNVRHHVYSFSPAKTFELKLYSGVPGSPVVFDKAGTVVLGCNIHDEMVAYVQVVNTP 173 PNHDNVRHHVYSFSPAKTFELKLYSGVPGSPVVFDKAGTVVLGCNIHDEMVAYVQVVNTP Sbjct: 85 PNHDNVRHHVYSFSPAKTFELKLYSGVPGSPVVFDKAGTVVLGCNIHDEMVAYVQVVNTP 144 Query: 174 HFGVSERNGVVKLEGIANGRYTLKAWYFTMGPNQAAVEQPLEVQGDGRAVIKLNVKAVPL 233 FGV++R+G VKLEG+ NG+YTLKAWYFTMGPN+AAVEQPL+VQGDGRA IKLNVKAVPL Sbjct: 145 FFGVTDRSGSVKLEGVGNGKYTLKAWYFTMGPNEAAVEQPLQVQGDGRASIKLNVKAVPL 204 >ref|YP_004040647.1| hypothetical protein MPQ_2265 [Methylovorus sp. MP688] gb|ADQ85411.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 195 Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats. Identities = 99/197 (50%), Positives = 137/197 (69%), Gaps = 5/197 (2%) Query: 37 LALFLLWAGTWALSAQAAVSVQVLDSAGQPVPNAVVYAEPAGGGGAIKAARQVEIEQKNK 96 +A L+ TWA A +++ V D++G P+P+AVV+AEP A+ +EQKN+ Sbjct: 1 MAFLLVAYSTWA----AELTITVTDASGTPLPDAVVWAEP-NTKLALPVPGTAAVEQKNR 55 Query: 97 TFIPLVTVVQTGTAILFPNHDNVRHHVYSFSPAKTFELKLYSGVPGSPVVFDKAGTVVLG 156 F+PLV+VVQTGT++ FPN D V+HHVYSFSPAKTFELKLYSGVP +PVVFDKAGTVVLG Sbjct: 56 QFLPLVSVVQTGTSVSFPNRDKVKHHVYSFSPAKTFELKLYSGVPSTPVVFDKAGTVVLG 115 Query: 157 CNIHDEMVAYVQVVNTPHFGVSERNGVVKLEGIANGRYTLKAWYFTMGPNQAAVEQPLEV 216 CNIHD+M+A+++VV+TP+F +S+ G L + NG YTL W++ A E+ + V Sbjct: 116 CNIHDQMLAFIRVVDTPYFALSDSTGKATLTNVPNGPYTLAVWHYAQSNENALFEKAMVV 175 Query: 217 QGDGRAVIKLNVKAVPL 233 + D + +KL++ L Sbjct: 176 KADEQTAVKLDINTSAL 192 >ref|YP_003052076.1| hypothetical protein Msip34_2307 [Methylovorus glucosetrophus SIP3-4] gb|ACT51549.1| conserved hypothetical protein [Methylovorus glucosetrophus SIP3-4] Length = 209 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 98/197 (49%), Positives = 137/197 (69%), Gaps = 5/197 (2%) Query: 37 LALFLLWAGTWALSAQAAVSVQVLDSAGQPVPNAVVYAEPAGGGGAIKAARQVEIEQKNK 96 +A L+ TWA A +++ V D++G P+P+AVV+AEP A+ +EQKN+ Sbjct: 15 VAFLLVAYSTWA----AELTITVTDASGTPLPDAVVWAEP-NTKLALPVPGTAAVEQKNR 69 Query: 97 TFIPLVTVVQTGTAILFPNHDNVRHHVYSFSPAKTFELKLYSGVPGSPVVFDKAGTVVLG 156 F+PLV+VVQTGT++ FPN D V+HHVYSFSPAKTFELKLYSGVP +PVVFDKAGTVVLG Sbjct: 70 QFLPLVSVVQTGTSVSFPNRDKVKHHVYSFSPAKTFELKLYSGVPSTPVVFDKAGTVVLG 129 Query: 157 CNIHDEMVAYVQVVNTPHFGVSERNGVVKLEGIANGRYTLKAWYFTMGPNQAAVEQPLEV 216 CNIHD+M+A+++VV+TP+F +S+ G L + NG YTL W++ A E+ + + Sbjct: 130 CNIHDQMLAFIRVVDTPYFALSDSTGKATLTNVPNGPYTLAVWHYAQSNENALFEKAMVI 189 Query: 217 QGDGRAVIKLNVKAVPL 233 + D + +KL++ L Sbjct: 190 KADEQTAVKLDINTSAL 206 >ref|YP_003673766.1| hypothetical protein M301_0805 [Methylotenera versatilis 301] gb|ADI29189.1| conserved hypothetical protein [Methylotenera versatilis 301] Length = 207 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 104/192 (54%), Positives = 133/192 (69%), Gaps = 2/192 (1%) Query: 40 FLLWAGTWALSAQAA-VSVQVLDSAGQPVPNAVVYAEPAGGGGAIKAARQVEIEQKNKTF 98 FLL A+AA + VQV D AG V NAVVY EP I + Q I QKNKTF Sbjct: 15 FLLLTCMLNPHAKAAEIEVQVNDVAGASVENAVVYLEPKDKTAPILKS-QAAIAQKNKTF 73 Query: 99 IPLVTVVQTGTAILFPNHDNVRHHVYSFSPAKTFELKLYSGVPGSPVVFDKAGTVVLGCN 158 IPLVTV+Q G++I+FPN D+VRHHVYSFSPAKTFELKLYSGVP +PVVFDKAGTVVLGCN Sbjct: 74 IPLVTVIQAGSSIIFPNKDSVRHHVYSFSPAKTFELKLYSGVPSTPVVFDKAGTVVLGCN 133 Query: 159 IHDEMVAYVQVVNTPHFGVSERNGVVKLEGIANGRYTLKAWYFTMGPNQAAVEQPLEVQG 218 IHD+M+A+V VV+TP+F ++ +G VK+ + NG Y LK W++ + V++P+ + Sbjct: 134 IHDQMLAFVYVVDTPYFAKTDASGKVKIGDVPNGDYLLKVWHYALRKENVTVDKPVSTKD 193 Query: 219 DGRAVIKLNVKA 230 + ++ KA Sbjct: 194 ADTIKMVIDTKA 205 >ref|YP_003048528.1| hypothetical protein Mmol_1093 [Methylotenera mobilis JLW8] gb|ACT48001.1| conserved hypothetical protein [Methylotenera mobilis JLW8] Length = 196 Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 102/190 (53%), Positives = 129/190 (67%), Gaps = 3/190 (1%) Query: 37 LALFLLWAGTWALSAQAAVSVQVLDSAGQPVPNAVVYAEPAGGGGAIKAARQVEIEQKNK 96 L+LFLL T S A ++VQV D AG P+ NAVVY E + A + IEQKNK Sbjct: 6 LSLFLL--ATSFQSHAADLTVQVNDQAGNPLSNAVVYLE-TDVKPSHNALSEANIEQKNK 62 Query: 97 TFIPLVTVVQTGTAILFPNHDNVRHHVYSFSPAKTFELKLYSGVPGSPVVFDKAGTVVLG 156 F P V+VVQ GT+I FPN D+VRHHVYSFSPAK FELKLYSGVP PVVFDK GTV+LG Sbjct: 63 QFWPFVSVVQVGTSINFPNKDSVRHHVYSFSPAKVFELKLYSGVPAKPVVFDKPGTVILG 122 Query: 157 CNIHDEMVAYVQVVNTPHFGVSERNGVVKLEGIANGRYTLKAWYFTMGPNQAAVEQPLEV 216 CNIHD M+AY+ +V TP+FG S+ G+VKL + +G++TLKAW++ EQ + + Sbjct: 123 CNIHDNMLAYIHIVETPYFGKSDVKGIVKLTDLPSGQHTLKAWHYATVKENFITEQKITI 182 Query: 217 QGDGRAVIKL 226 + + +KL Sbjct: 183 KNNETISLKL 192