BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3287.p         (148 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776102.1| protozoan/cyanobacterial globin family prote...   192   1e-47
ref|ZP_08620499.1| hemoglobin [Idiomarina sp. A28L] >gi|33628319...   125   2e-27
emb|CAZ88082.1| putative Globin-like protein [Thiomonas sp. 3As]      125   2e-27
ref|YP_003853600.1| protozoan/cyanobacterial globin family prote...   124   5e-27
ref|YP_003642823.1| globin [Thiomonas intermedia K12] >gi|295795...   123   1e-26

>ref|YP_003776102.1| protozoan/cyanobacterial globin family protein [Herbaspirillum
           seropedicae SmR1]
 gb|ADJ64194.1| protozoan/cyanobacterial globin family protein [Herbaspirillum
           seropedicae SmR1]
          Length = 144

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 96/122 (78%), Positives = 106/122 (86%)

Query: 27  PATPDDSLFRALGGLPVIERVVQDFMDNMLADARIRHTFDNSNVKRVREKLVEQFCQLSG 86
           PA   D+LF  LGGLPVI + V DFM NMLADARIRHTFD+SN+KRV + LVEQFC LSG
Sbjct: 23  PAHAADTLFADLGGLPVIRQTVHDFMANMLADARIRHTFDHSNLKRVEDMLVEQFCMLSG 82

Query: 87  GGCIYTGDPMREVHQGLKLSNADFNALVEDLQLAMDKNGIPSRTQNRMLALLAPMQRETV 146
           G C YTGDPM+EVHQGLKL+NADFNALVEDLQ AMDKNGIP RTQNR+LALLAPMQR+TV
Sbjct: 83  GPCTYTGDPMKEVHQGLKLTNADFNALVEDLQQAMDKNGIPFRTQNRLLALLAPMQRDTV 142

Query: 147 SR 148
           +R
Sbjct: 143 TR 144


>ref|ZP_08620499.1| hemoglobin [Idiomarina sp. A28L]
 gb|EGN76406.1| hemoglobin [Idiomarina sp. A28L]
          Length = 142

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 70/146 (47%), Positives = 94/146 (64%), Gaps = 6/146 (4%)

Query: 1   MNKFRMQQAALGLTLACALGLAQAQTPATPDDSLFRALGGLPVIERVVQDFMDNMLADAR 60
           MN+  M    L   L    G A A++     DSL++ LGG   IE++V+D + N+  D R
Sbjct: 1   MNRLLMNSFLLAALLMLP-GQANARS-----DSLYQDLGGTAGIEQLVEDLLFNVADDRR 54

Query: 61  IRHTFDNSNVKRVREKLVEQFCQLSGGGCIYTGDPMREVHQGLKLSNADFNALVEDLQLA 120
           IRH F + ++ R+ EKL EQ C+L+GG C+YTGD M + H G+ ++ ADFNALVE LQ+A
Sbjct: 55  IRHHFMDIDIGRLHEKLSEQICELAGGPCVYTGDDMVKSHTGMGVTRADFNALVEALQVA 114

Query: 121 MDKNGIPSRTQNRMLALLAPMQRETV 146
           MD NG+    QNR+LALLAPM  E V
Sbjct: 115 MDDNGVSVSAQNRLLALLAPMHHEIV 140


>emb|CAZ88082.1| putative Globin-like protein [Thiomonas sp. 3As]
          Length = 151

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 65/138 (47%), Positives = 88/138 (63%), Gaps = 1/138 (0%)

Query: 12  GLTLACALGL-AQAQTPATPDDSLFRALGGLPVIERVVQDFMDNMLADARIRHTFDNSNV 70
           G+ L CAL   A A    T   +L+  LGG P I +VV D + N+ AD RI H F  +N+
Sbjct: 14  GVALTCALAFPALAHAQMTSGQTLYEQLGGKPAITKVVHDMIVNVAADNRINHFFAKTNI 73

Query: 71  KRVREKLVEQFCQLSGGGCIYTGDPMREVHQGLKLSNADFNALVEDLQLAMDKNGIPSRT 130
             ++ +LV Q C+ +GG C YTG  MR+ H+G+ LS ADFNALVEDLQ +MD N +P   
Sbjct: 74  PHLQMELVNQVCEGTGGPCKYTGLNMRQAHKGMNLSTADFNALVEDLQKSMDSNHVPLGL 133

Query: 131 QNRMLALLAPMQRETVSR 148
           QN++LA+LAPM+   V +
Sbjct: 134 QNQLLAILAPMEPHVVHQ 151


>ref|YP_003853600.1| protozoan/cyanobacterial globin family protein [Parvularcula
           bermudensis HTCC2503]
 gb|ADM08459.1| protozoan/cyanobacterial globin family protein [Parvularcula
           bermudensis HTCC2503]
          Length = 144

 Score =  124 bits (311), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 65/136 (47%), Positives = 89/136 (65%)

Query: 13  LTLACALGLAQAQTPATPDDSLFRALGGLPVIERVVQDFMDNMLADARIRHTFDNSNVKR 72
           L+L  A  +A     A  DD+L+RALG    IERV++  +   LAD RI  TF+ +N +R
Sbjct: 8   LSLVVATAMAPQPAAALSDDALYRALGEKAGIERVIETLLHRSLADPRIADTFEGANFER 67

Query: 73  VREKLVEQFCQLSGGGCIYTGDPMREVHQGLKLSNADFNALVEDLQLAMDKNGIPSRTQN 132
           + EKLV Q C+L+GG C+Y G  M + H G +L+ A FNALVE+L+ AM   G+  R QN
Sbjct: 68  LEEKLVLQICELAGGPCVYDGLSMADSHMGQELTTAHFNALVENLRAAMAAEGVGFRAQN 127

Query: 133 RMLALLAPMQRETVSR 148
           R+LALLAPM R+ V++
Sbjct: 128 RLLALLAPMHRDVVTK 143


>ref|YP_003642823.1| globin [Thiomonas intermedia K12]
 gb|ADG30493.1| globin [Thiomonas intermedia K12]
          Length = 151

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 63/132 (47%), Positives = 85/132 (64%), Gaps = 1/132 (0%)

Query: 12  GLTLACALGL-AQAQTPATPDDSLFRALGGLPVIERVVQDFMDNMLADARIRHTFDNSNV 70
           G+ L CAL   A A    T   +L+  LGG P I +VV D + N+ AD RI H F  +N+
Sbjct: 14  GVALTCALAFPALAHAQMTSGQTLYEQLGGKPAITKVVHDMIVNVAADNRINHFFAKTNI 73

Query: 71  KRVREKLVEQFCQLSGGGCIYTGDPMREVHQGLKLSNADFNALVEDLQLAMDKNGIPSRT 130
             ++ +LV Q C+ +GG C YTG  MR+ H+G+ L  ADFNALVEDLQ +MD N +P   
Sbjct: 74  PHLQMELVNQVCEATGGPCKYTGLNMRQAHKGMNLRTADFNALVEDLQKSMDSNNVPLGL 133

Query: 131 QNRMLALLAPMQ 142
           QN++LA+LAPM+
Sbjct: 134 QNQLLAILAPME 145