BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3276.p (222 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776091.1| GntR family transcription regulator protein ... 353 1e-95 ref|YP_004752359.1| putative GntR-family transcription regulator... 326 1e-87 ref|YP_001354254.1| GntR family transcriptional regulator [Janth... 304 6e-81 ref|ZP_08276091.1| Transcriptional regulator, GntR family [Oxalo... 296 1e-78 ref|YP_001099763.1| GntR family transcriptional regulator [Hermi... 296 2e-78 >ref|YP_003776091.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64183.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 222 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 195/222 (87%), Positives = 207/222 (93%) Query: 1 MDTPKTRSETLRESIEELIAVGKLAPGQHLDETSLAEEFGVSRTPIREALIQLASMGIVE 60 MDTPKTR+E LRESIEELIAV KL+PGQHLDETSLAEEFGVSRTPIREALIQLASMGIVE Sbjct: 1 MDTPKTRAEALRESIEELIAVSKLSPGQHLDETSLAEEFGVSRTPIREALIQLASMGIVE 60 Query: 61 MRPRRGAIVAEIGPQQLIEMFEVMAEFEAMCGRLAARRMSAAEHASLLAAHQACKDARDA 120 MRPRRGAIVAEIGPQQLIEMFEVMAEFEAMCGRLAARRM+ AEHA LLAAHQAC+ ARDA Sbjct: 61 MRPRRGAIVAEIGPQQLIEMFEVMAEFEAMCGRLAARRMTPAEHAELLAAHQACQAARDA 120 Query: 121 VDPDTYFYKNEDFHDHIYAGSHNGFLEEQARLLQRRLRPYRRLQLRVRDRLKRSYDEHEG 180 DPD YFY NE FHDHIYAGSHNGFL +QAR L RRLRPYRRLQLRVRDRLK S+DEH+ Sbjct: 121 NDPDAYFYLNEAFHDHIYAGSHNGFLADQARALHRRLRPYRRLQLRVRDRLKSSFDEHQA 180 Query: 181 VVDAIIAGDPERTVEVLRQHIMIQGQRFADLVASLHQLKSAA 222 VVDAII+GD E+TV++LR+HIMIQGQRFADLVASLHQLKSAA Sbjct: 181 VVDAIISGDAEKTVDLLREHIMIQGQRFADLVASLHQLKSAA 222 >ref|YP_004752359.1| putative GntR-family transcription regulator [Collimonas fungivorans Ter331] gb|AEK61536.1| putative GntR-family transcription regulator [Collimonas fungivorans Ter331] Length = 314 Score = 326 bits (836), Expect = 1e-87, Method: Composition-based stats. Identities = 167/220 (75%), Positives = 185/220 (84%) Query: 1 MDTPKTRSETLRESIEELIAVGKLAPGQHLDETSLAEEFGVSRTPIREALIQLASMGIVE 60 M T K RSE+LRE+IEE+IAVG+ PGQHLDET LA +FGVSRTP+REALIQLASMGIV Sbjct: 86 MLTTKNRSESLRETIEEMIAVGEFRPGQHLDETDLAIKFGVSRTPVREALIQLASMGIVV 145 Query: 61 MRPRRGAIVAEIGPQQLIEMFEVMAEFEAMCGRLAARRMSAAEHASLLAAHQACKDARDA 120 RPRRG +VAEIGP+QL+EMFEVMAE EAMCGRLAARRMS EHASLLAAHQAC +ARDA Sbjct: 146 TRPRRGTVVAEIGPRQLVEMFEVMAELEAMCGRLAARRMSGEEHASLLAAHQACMEARDA 205 Query: 121 VDPDTYFYKNEDFHDHIYAGSHNGFLEEQARLLQRRLRPYRRLQLRVRDRLKRSYDEHEG 180 DPDTYFY NE FH IY GSHN FL QA+ LQRRLRPYRRLQLRVRDRLK SY EH+G Sbjct: 206 QDPDTYFYMNEAFHGAIYEGSHNAFLAAQAQSLQRRLRPYRRLQLRVRDRLKVSYQEHDG 265 Query: 181 VVDAIIAGDPERTVEVLRQHIMIQGQRFADLVASLHQLKS 220 VV AIIAGD E ++LRQH+ +QGQRF DL+ASL QL + Sbjct: 266 VVQAIIAGDSELAADLLRQHVTVQGQRFVDLIASLQQLTA 305 >ref|YP_001354254.1| GntR family transcriptional regulator [Janthinobacterium sp. Marseille] gb|ABR89258.1| transcriptional regulator, GntR family [Janthinobacterium sp. Marseille] Length = 229 Score = 304 bits (779), Expect = 6e-81, Method: Composition-based stats. Identities = 171/221 (77%), Positives = 182/221 (82%) Query: 2 DTPKTRSETLRESIEELIAVGKLAPGQHLDETSLAEEFGVSRTPIREALIQLASMGIVEM 61 D +TRSETLRE IEE+IAVG L PGQHLDET LAE FGVSRTPIREALIQLASMGIV + Sbjct: 9 DNTQTRSETLREQIEEMIAVGTLKPGQHLDETVLAERFGVSRTPIREALIQLASMGIVVI 68 Query: 62 RPRRGAIVAEIGPQQLIEMFEVMAEFEAMCGRLAARRMSAAEHASLLAAHQACKDARDAV 121 RPRRGAIVAEIGPQQLIEMFEVMAE EAMC RLAARRMS AEHA L+A H ACK ARD Sbjct: 69 RPRRGAIVAEIGPQQLIEMFEVMAELEAMCARLAARRMSPAEHAILMATHLACKQARDDA 128 Query: 122 DPDTYFYKNEDFHDHIYAGSHNGFLEEQARLLQRRLRPYRRLQLRVRDRLKRSYDEHEGV 181 D D YFYKNE+FH IY GS N FLEEQAR LQRRLRPYRRLQLRVR+R+ S+DEH V Sbjct: 129 DSDAYFYKNEEFHQQIYIGSKNTFLEEQARALQRRLRPYRRLQLRVRNRVTASFDEHGAV 188 Query: 182 VDAIIAGDPERTVEVLRQHIMIQGQRFADLVASLHQLKSAA 222 VDAII G + E+LRQHIMIQGQRF+DLVASL L S A Sbjct: 189 VDAIIEGKGDLAAELLRQHIMIQGQRFSDLVASLSALNSEA 229 >ref|ZP_08276091.1| Transcriptional regulator, GntR family [Oxalobacteraceae bacterium IMCC9480] gb|EGF30438.1| Transcriptional regulator, GntR family [Oxalobacteraceae bacterium IMCC9480] Length = 237 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 156/224 (69%), Positives = 181/224 (80%), Gaps = 4/224 (1%) Query: 1 MDTP----KTRSETLRESIEELIAVGKLAPGQHLDETSLAEEFGVSRTPIREALIQLASM 56 M+TP K RS +LRE+IEE+IA+G+L PG HLDET LA F VSRTPIREALIQLASM Sbjct: 1 MNTPNNPAKNRSSSLREAIEEMIAIGELPPGAHLDETVLANRFEVSRTPIREALIQLASM 60 Query: 57 GIVEMRPRRGAIVAEIGPQQLIEMFEVMAEFEAMCGRLAARRMSAAEHASLLAAHQACKD 116 G++ +RPRRGA+VAEI PQQL+EMFEVM+EFEAMCGRLAARRM+ EH +L AH AC+ Sbjct: 61 GLIVIRPRRGAVVAEISPQQLVEMFEVMSEFEAMCGRLAARRMTPGEHQVMLTAHHACEQ 120 Query: 117 ARDAVDPDTYFYKNEDFHDHIYAGSHNGFLEEQARLLQRRLRPYRRLQLRVRDRLKRSYD 176 ARDA DPD YFYKNE FH +Y GSHN FL EQA L RRLRPYRRLQLRVR+R+ S++ Sbjct: 121 ARDAQDPDAYFYKNEAFHAALYKGSHNTFLTEQALALHRRLRPYRRLQLRVRNRIANSFN 180 Query: 177 EHEGVVDAIIAGDPERTVEVLRQHIMIQGQRFADLVASLHQLKS 220 EHE +V+AIIAGD E T +LR HIMIQGQRFADL+ASL L + Sbjct: 181 EHEAIVNAIIAGDGEMTATLLRNHIMIQGQRFADLIASLPLLST 224 >ref|YP_001099763.1| GntR family transcriptional regulator [Herminiimonas arsenicoxydans] emb|CAL61636.1| Transcriptional regulatory proteins, GntR family [Herminiimonas arsenicoxydans] Length = 220 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 162/211 (76%), Positives = 179/211 (84%) Query: 5 KTRSETLRESIEELIAVGKLAPGQHLDETSLAEEFGVSRTPIREALIQLASMGIVEMRPR 64 K SE LRE+IEE+IAVGKL PG HLDET LA+EFGVSRTPIREALIQLASMGI+ +RPR Sbjct: 2 KKHSEVLREAIEEMIAVGKLPPGHHLDETELAKEFGVSRTPIREALIQLASMGIIVIRPR 61 Query: 65 RGAIVAEIGPQQLIEMFEVMAEFEAMCGRLAARRMSAAEHASLLAAHQACKDARDAVDPD 124 RGAIVAEIGPQQLIEMFEVMAE EAMC RLAARRMS A HA+L A H AC++ARD+ D D Sbjct: 62 RGAIVAEIGPQQLIEMFEVMAELEAMCARLAARRMSPAGHATLKATHLACEEARDSADSD 121 Query: 125 TYFYKNEDFHDHIYAGSHNGFLEEQARLLQRRLRPYRRLQLRVRDRLKRSYDEHEGVVDA 184 YFYKNE+FH IY GS N FLEEQAR+LQRRLRPYRRLQLRVR+R++ S+DEH VVDA Sbjct: 122 AYFYKNEEFHQQIYIGSQNSFLEEQARVLQRRLRPYRRLQLRVRNRVQASFDEHGAVVDA 181 Query: 185 IIAGDPERTVEVLRQHIMIQGQRFADLVASL 215 II G E E+LRQHIMIQGQRF DL+ASL Sbjct: 182 IIEGKGELAAELLRQHIMIQGQRFTDLIASL 212