BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3270.p (226 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776086.1| acetyl-CoA carboxylase beta subunit [Herbasp... 335 2e-90 ref|YP_001099769.1| malonate decarboxylase subunit MdcB [Hermini... 300 1e-79 ref|ZP_08273963.1| Malonate decarboxylase beta subunit [Oxalobac... 300 1e-79 ref|YP_001354251.1| malonate decarboxylase beta subunit [Janthin... 296 2e-78 ref|YP_004752365.1| malonate decarboxylase subunit beta [Collimo... 291 6e-77 >ref|YP_003776086.1| acetyl-CoA carboxylase beta subunit [Herbaspirillum seropedicae SmR1] gb|ADJ64178.1| acetyl-CoA carboxylase beta subunit protein [Herbaspirillum seropedicae SmR1] Length = 298 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 200/226 (88%), Positives = 210/226 (92%) Query: 1 MGGAVGEVHGAKLVGLLKRAVQEKAAGVILLLETGGVRLHEANAGLIAVSEVMRAVLEAR 60 MGGAVGEVHGAKLVGLL+RAV ++AAGVILLLETGGVRLHEANAGLIAVSEVMRAVLE R Sbjct: 73 MGGAVGEVHGAKLVGLLRRAVVKQAAGVILLLETGGVRLHEANAGLIAVSEVMRAVLETR 132 Query: 61 AAGIPVIVLVGGANGCFGGMGIVARCANTIIMSEEGRLAMSGPEVIETANGVEEFDSRDR 120 AAGIPVIVLVGGANGCFGGMGIVARCANT+IMSEEGRLAMSGPEVIETANGVEEFDSRDR Sbjct: 133 AAGIPVIVLVGGANGCFGGMGIVARCANTVIMSEEGRLAMSGPEVIETANGVEEFDSRDR 192 Query: 121 ALVWRTTGGKHRYLIGDCQQLVSDDIDAFRTAAIAALSAVSDAKLTLAGLEAEQEMLRRR 180 ALVWRTTGGKHRYLIGDCQQLVSDD AFR AAIAAL+ VS +LTLA LEAEQEMLRRR Sbjct: 193 ALVWRTTGGKHRYLIGDCQQLVSDDTAAFRAAAIAALAQVSAPQLTLAALEAEQEMLRRR 252 Query: 181 IATFGHAEDPMDIWAELGVARPETVPMLEAAAFTAMAERLRIVSKA 226 IATFG A+DPMDIWAELGV RP++VPMLEA AFTAMA+ RI S A Sbjct: 253 IATFGLADDPMDIWAELGVPRPDSVPMLEADAFTAMAQAHRITSPA 298 >ref|YP_001099769.1| malonate decarboxylase subunit MdcB [Herminiimonas arsenicoxydans] emb|CAL61642.1| Malonate decarboxylase beta subunit MdcB [Herminiimonas arsenicoxydans] Length = 298 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 160/224 (71%), Positives = 183/224 (81%), Gaps = 2/224 (0%) Query: 1 MGGAVGEVHGAKLVGLLKRAVQEKAAGVILLLETGGVRLHEANAGLIAVSEVMRAVLEAR 60 MGGAVGEVHGAKLVGLLKRA+Q++ GV+LLLETGGVRLHEANAGLIAVSEVMRAVL+ R Sbjct: 72 MGGAVGEVHGAKLVGLLKRAIQDRVDGVVLLLETGGVRLHEANAGLIAVSEVMRAVLDTR 131 Query: 61 AAGIPVIVLVGGANGCFGGMGIVARCANTIIMSEEGRLAMSGPEVIETANGVEEFDSRDR 120 AA IPVIVL+GG+NGCFGGMGIVA CAN I+MSEE RLAMSGPEVIET +GVEEFDSRDR Sbjct: 132 AANIPVIVLIGGSNGCFGGMGIVACCANAILMSEEARLAMSGPEVIETTHGVEEFDSRDR 191 Query: 121 ALVWRTTGGKHRYLIGDCQQLVSDDIDAFRTAAIAALSAV--SDAKLTLAGLEAEQEMLR 178 ALVWRTTGGKHRYL+GDC +++DDID FR AA AAL S A+LTL LE+E +L Sbjct: 192 ALVWRTTGGKHRYLLGDCDAVLADDIDVFRHAAGAALQRCRQSSAELTLQALESEHALLS 251 Query: 179 RRIATFGHAEDPMDIWAELGVARPETVPMLEAAAFTAMAERLRI 222 +R+ FG +PMDIW+ LG+A P +PMLEA AF R+ Sbjct: 252 KRLKDFGQLSEPMDIWSSLGIANPAALPMLEAEAFMQQVSSFRL 295 >ref|ZP_08273963.1| Malonate decarboxylase beta subunit [Oxalobacteraceae bacterium IMCC9480] gb|EGF32569.1| Malonate decarboxylase beta subunit [Oxalobacteraceae bacterium IMCC9480] Length = 304 Score = 300 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 165/218 (75%), Positives = 184/218 (84%), Gaps = 2/218 (0%) Query: 1 MGGAVGEVHGAKLVGLLKRAVQEKAAGVILLLETGGVRLHEANAGLIAVSEVMRAVLEAR 60 MGGAVGEVHGAKLVGLL+RAV E+ VILLLETGGVRLHEANAGLIAVSEVMRAVL+ R Sbjct: 72 MGGAVGEVHGAKLVGLLQRAVTEQVVAVILLLETGGVRLHEANAGLIAVSEVMRAVLQTR 131 Query: 61 AAGIPVIVLVGGANGCFGGMGIVARCANTIIMSEEGRLAMSGPEVIETANGVEEFDSRDR 120 AAG+PVIVL+GG+NGCFGGMGIVARCAN I+MSEEGRLAMSGPEVIETA+GVEEFD+RDR Sbjct: 132 AAGVPVIVLIGGSNGCFGGMGIVARCANFIVMSEEGRLAMSGPEVIETASGVEEFDARDR 191 Query: 121 ALVWRTTGGKHRYLIGDCQQLVSDDIDAFRTAAIAALSAVSDA--KLTLAGLEAEQEMLR 178 ALVWRTTGGKHRYL+GDCQ +V+DD+DAFR AA AA+ A A LTLA LEAEQ ML Sbjct: 192 ALVWRTTGGKHRYLLGDCQAIVADDMDAFRQAASAAIPACPAAGVPLTLAELEAEQAMLA 251 Query: 179 RRIATFGHAEDPMDIWAELGVARPETVPMLEAAAFTAM 216 R+ FG +PMDIW +G+ P VPMLEA FT + Sbjct: 252 ARLQDFGTQTEPMDIWRRIGIEDPHLVPMLEATEFTRL 289 >ref|YP_001354251.1| malonate decarboxylase beta subunit [Janthinobacterium sp. Marseille] gb|ABR89261.1| malonate decarboxylase beta subunit [Janthinobacterium sp. Marseille] Length = 299 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 162/215 (75%), Positives = 176/215 (81%), Gaps = 2/215 (0%) Query: 1 MGGAVGEVHGAKLVGLLKRAVQEKAAGVILLLETGGVRLHEANAGLIAVSEVMRAVLEAR 60 MGGAVGEVHGAKLVGLLKRAV E GVILLLETGGVRLHEANAGLIAVSEVMRAVL+ R Sbjct: 72 MGGAVGEVHGAKLVGLLKRAVSEGVDGVILLLETGGVRLHEANAGLIAVSEVMRAVLDTR 131 Query: 61 AAGIPVIVLVGGANGCFGGMGIVARCANTIIMSEEGRLAMSGPEVIETANGVEEFDSRDR 120 AA IPVIVLVGG NGCFGGMGIVA CAN I+MSEEGRLAMSGPEVIET +GVEEFDSRDR Sbjct: 132 AANIPVIVLVGGTNGCFGGMGIVACCANDILMSEEGRLAMSGPEVIETTHGVEEFDSRDR 191 Query: 121 ALVWRTTGGKHRYLIGDCQQLVSDDIDAFRTAAIAALSAVS--DAKLTLAGLEAEQEMLR 178 ALVWRTTGGKHRYL+GDC ++ DDI AFR AA L A+LTL LE+E +L Sbjct: 192 ALVWRTTGGKHRYLLGDCSAVLPDDIAAFRQAAFDTLQQYQQGSAELTLEDLESEHTLLN 251 Query: 179 RRIATFGHAEDPMDIWAELGVARPETVPMLEAAAF 213 RR+ FG+ +PMDIW+ LGVA P +PMLEA AF Sbjct: 252 RRLQAFGNFSEPMDIWSRLGVADPGILPMLEAQAF 286 >ref|YP_004752365.1| malonate decarboxylase subunit beta [Collimonas fungivorans Ter331] gb|AEK61542.1| Malonate decarboxylase beta subunit [Collimonas fungivorans Ter331] Length = 301 Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats. Identities = 164/226 (72%), Positives = 182/226 (80%), Gaps = 4/226 (1%) Query: 1 MGGAVGEVHGAKLVGLLKRAVQEKAAGVILLLETGGVRLHEANAGLIAVSEVMRAVLEAR 60 MGGAVGEVHGAKL GLL RAV+E+ V+LLLE+GGVRLHEANAGLIAVSEVMRA+LE R Sbjct: 72 MGGAVGEVHGAKLTGLLLRAVRERPFAVVLLLESGGVRLHEANAGLIAVSEVMRALLEVR 131 Query: 61 AAGIPVIVLVGGANGCFGGMGIVARCANTIIMSEEGRLAMSGPEVIETANGVEEFDSRDR 120 AAGIPVIVL+GG+NGCFGGMGIVARCAN I+MSEEGRLAMSGPEVIETANGVEEFDSRDR Sbjct: 132 AAGIPVIVLIGGSNGCFGGMGIVARCANAIVMSEEGRLAMSGPEVIETANGVEEFDSRDR 191 Query: 121 ALVWRTTGGKHRYLIGDCQQLVSDDIDAFRTAAI----AALSAVSDAKLTLAGLEAEQEM 176 ALVWRTTGGKHRYL+GDCQ LV+DD AFR AA + LTLA LEAEQ++ Sbjct: 192 ALVWRTTGGKHRYLLGDCQMLVADDGAAFRQAAFDLAQQCHANAGGIGLTLAALEAEQQL 251 Query: 177 LRRRIATFGHAEDPMDIWAELGVARPETVPMLEAAAFTAMAERLRI 222 L+ RI +FG DP+DIW LGVA +PMLEA AF LR+ Sbjct: 252 LQDRIDSFGQTADPLDIWTRLGVADAARLPMLEAEAFVDATATLRL 297