BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3269.p (246 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776085.1| malonate decarboxylase gamma-subunit [Herbas... 408 e-112 ref|ZP_08273962.1| Malonate decarboxylase gamma subunit [Oxaloba... 343 1e-92 ref|YP_001099770.1| malonate decarboxylase subunit MdcE [Hermini... 340 2e-91 ref|YP_001354250.1| malonate decarboxylase gamma subunit [Janthi... 334 7e-90 ref|ZP_08273814.1| Malonate decarboxylase gamma subunit [Oxaloba... 328 6e-88 >ref|YP_003776085.1| malonate decarboxylase gamma-subunit [Herbaspirillum seropedicae SmR1] gb|ADJ64177.1| malonate decarboxylase gamma-subunit protein [Herbaspirillum seropedicae SmR1] Length = 246 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 213/246 (86%), Positives = 223/246 (90%) Query: 1 MNQTVTPPQVDWRALAQDLFPQGHAITEQDHFLSGTAQVDGRTVTVVGTTGHTPIGIEIA 60 M T TP QVDWRALAQ LFPQGH ITE +HFLSGTAQVDG TVTVVGTTGHTPIGIEIA Sbjct: 1 MTATPTPGQVDWRALAQTLFPQGHQITESEHFLSGTAQVDGHTVTVVGTTGHTPIGIEIA 60 Query: 61 LAQASAILQTVREHPGRPIVILVDTQGQRLRHRDEMLGINSYMAHLGKCVELARRQGHRV 120 LAQA+AIL TVR HPGR IVILVDTQGQRLRHRDEMLGINSYMAHLGKCVELARRQGHRV Sbjct: 61 LAQATAILDTVRNHPGRAIVILVDTQGQRLRHRDEMLGINSYMAHLGKCVELARRQGHRV 120 Query: 121 VGLVYDQALSGGFITSGLIADACYALPEATIRVMGLPAMARITKVPEERLTELAKSNPVF 180 +GLVYDQALSGGFITSGLIADACYALP+ATIRVMGLPAMARITKVPEERLTELAKSNPVF Sbjct: 121 IGLVYDQALSGGFITSGLIADACYALPDATIRVMGLPAMARITKVPEERLTELAKSNPVF 180 Query: 181 APGPENYLRMGGVAGIWNGDLAKALADALVQDRSADTRAATGLERGGRKWAQRVIDAVAN 240 APGPENYLRMGGVA IW+GDLA+A+ AL +AD RAA G RGGR+WAQRVIDAVA+ Sbjct: 181 APGPENYLRMGGVAEIWSGDLAQAMRQALASADNADVRAALGRARGGRQWAQRVIDAVAH 240 Query: 241 DTPLNG 246 D PLNG Sbjct: 241 DAPLNG 246 >ref|ZP_08273962.1| Malonate decarboxylase gamma subunit [Oxalobacteraceae bacterium IMCC9480] gb|EGF32568.1| Malonate decarboxylase gamma subunit [Oxalobacteraceae bacterium IMCC9480] Length = 233 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 172/229 (75%), Positives = 193/229 (84%) Query: 10 VDWRALAQDLFPQGHAITEQDHFLSGTAQVDGRTVTVVGTTGHTPIGIEIALAQASAILQ 69 ++W+ LA LFP GH +TE DHFLSG+AQVDG T+ V+GTT H PIGIEIALAQA IL Sbjct: 1 MEWQQLAAALFPAGHTVTETDHFLSGSAQVDGHTIAVIGTTNHAPIGIEIALAQAQTILT 60 Query: 70 TVREHPGRPIVILVDTQGQRLRHRDEMLGINSYMAHLGKCVELARRQGHRVVGLVYDQAL 129 VRE P RPI+ILVDTQGQRLRHRDEMLGINSYMAHLGKC+ELAR +GH+V+ LVYDQAL Sbjct: 61 IVREQPQRPILILVDTQGQRLRHRDEMLGINSYMAHLGKCIELARCRGHKVIALVYDQAL 120 Query: 130 SGGFITSGLIADACYALPEATIRVMGLPAMARITKVPEERLTELAKSNPVFAPGPENYLR 189 SGGFITSG++ADACYALPE+TIRVMGLPAMARITKVP ERLTELAK NPVFAPGP+NYLR Sbjct: 121 SGGFITSGMMADACYALPESTIRVMGLPAMARITKVPLERLTELAKDNPVFAPGPDNYLR 180 Query: 190 MGGVAGIWNGDLAKALADALVQDRSADTRAATGLERGGRKWAQRVIDAV 238 MGG+ IW GDLA+ L +AL +D RAA GL RGGR AQ VI+AV Sbjct: 181 MGGIEAIWEGDLAQQLVEALANANGSDRRAALGLARGGRLLAQPVIEAV 229 >ref|YP_001099770.1| malonate decarboxylase subunit MdcE [Herminiimonas arsenicoxydans] emb|CAL61643.1| Malonate decarboxylase gamma-subunit, MdcE [Herminiimonas arsenicoxydans] Length = 238 Score = 340 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 168/229 (73%), Positives = 192/229 (83%) Query: 10 VDWRALAQDLFPQGHAITEQDHFLSGTAQVDGRTVTVVGTTGHTPIGIEIALAQASAILQ 69 ++W+ LA +LFP+GH I E+D FL G A + GR TV+GTTGHTPIG+EIALAQA AIL+ Sbjct: 1 MEWQKLAAELFPEGHDIVERDFFLRGNATISGRVATVIGTTGHTPIGVEIALAQAHAILE 60 Query: 70 TVREHPGRPIVILVDTQGQRLRHRDEMLGINSYMAHLGKCVELARRQGHRVVGLVYDQAL 129 T+RE PGRP++ILVDTQGQRLRHRDEMLGIN YMAHLGKC++ ARR GH V+GLVYDQAL Sbjct: 61 TMREFPGRPLIILVDTQGQRLRHRDEMLGINRYMAHLGKCIDRARRNGHPVIGLVYDQAL 120 Query: 130 SGGFITSGLIADACYALPEATIRVMGLPAMARITKVPEERLTELAKSNPVFAPGPENYLR 189 SGGFITSGL+ADACYALPEA IRVMGLPAMARITKVPEE+L ELAKSNPVFAPG ENYL Sbjct: 121 SGGFITSGLMADACYALPEAEIRVMGLPAMARITKVPEEKLRELAKSNPVFAPGAENYLN 180 Query: 190 MGGVAGIWNGDLAKALADALVQDRSADTRAATGLERGGRKWAQRVIDAV 238 MGGV IW+ DLA L+ AL Q ++D R+ GLERGGRK A+ VI V Sbjct: 181 MGGVEAIWHDDLAACLSRALQQTDASDRRSERGLERGGRKMARPVIQGV 229 >ref|YP_001354250.1| malonate decarboxylase gamma subunit [Janthinobacterium sp. Marseille] gb|ABR89262.1| malonate decarboxylase gamma subunit [Janthinobacterium sp. Marseille] Length = 238 Score = 334 bits (857), Expect = 7e-90, Method: Composition-based stats. Identities = 169/227 (74%), Positives = 190/227 (83%) Query: 12 WRALAQDLFPQGHAITEQDHFLSGTAQVDGRTVTVVGTTGHTPIGIEIALAQASAILQTV 71 W+ LA LFPQGH I E D+FL GTA+VD +TV V+GTTGHTPIG+EIALAQA+AIL T+ Sbjct: 3 WQTLATQLFPQGHDIVEHDYFLRGTAKVDQQTVAVIGTTGHTPIGVEIALAQANAILDTM 62 Query: 72 REHPGRPIVILVDTQGQRLRHRDEMLGINSYMAHLGKCVELARRQGHRVVGLVYDQALSG 131 R PGRP+VILVDTQGQRLR+RDEMLGIN YMAHLGKC+++ARR+GH+V+GLVYDQALSG Sbjct: 63 RNFPGRPLVILVDTQGQRLRYRDEMLGINRYMAHLGKCIDVARRRGHKVIGLVYDQALSG 122 Query: 132 GFITSGLIADACYALPEATIRVMGLPAMARITKVPEERLTELAKSNPVFAPGPENYLRMG 191 GFITSGL+ADACYALPEA IRVMGL AMARITKVP ERLTELA++NPVFAPG ENYL MG Sbjct: 123 GFITSGLMADACYALPEAEIRVMGLAAMARITKVPLERLTELAQANPVFAPGAENYLNMG 182 Query: 192 GVAGIWNGDLAKALADALVQDRSADTRAATGLERGGRKWAQRVIDAV 238 GV IW GDL LA AL Q S D R+A GLERGGRK + V V Sbjct: 183 GVEAIWQGDLESCLARALQQADSIDHRSARGLERGGRKMSLPVTQLV 229 >ref|ZP_08273814.1| Malonate decarboxylase gamma subunit [Oxalobacteraceae bacterium IMCC9480] gb|EGF32714.1| Malonate decarboxylase gamma subunit [Oxalobacteraceae bacterium IMCC9480] Length = 231 Score = 328 bits (840), Expect = 6e-88, Method: Composition-based stats. Identities = 169/231 (73%), Positives = 187/231 (80%) Query: 10 VDWRALAQDLFPQGHAITEQDHFLSGTAQVDGRTVTVVGTTGHTPIGIEIALAQASAILQ 69 +DW+ LA LFPQGH IT FLSG A V TV V+GTT HTPIG+EIALAQA A+L Sbjct: 1 MDWQTLATQLFPQGHQITASASFLSGNATVGDTTVAVIGTTDHTPIGVEIALAQARAVLA 60 Query: 70 TVREHPGRPIVILVDTQGQRLRHRDEMLGINSYMAHLGKCVELARRQGHRVVGLVYDQAL 129 TVR+ P RPI+ILVDTQGQRLRHRDEMLGINSYMAHLGKC+ LAR+ GHRV+GLVYDQAL Sbjct: 61 TVRDFPQRPILILVDTQGQRLRHRDEMLGINSYMAHLGKCIALARQSGHRVIGLVYDQAL 120 Query: 130 SGGFITSGLIADACYALPEATIRVMGLPAMARITKVPEERLTELAKSNPVFAPGPENYLR 189 SGGFITSGL+AD CYALP TIRVMGLPAMARITKVPEERL ELAK NPVFAPGPENY+R Sbjct: 121 SGGFITSGLMADDCYALPGTTIRVMGLPAMARITKVPEERLIELAKDNPVFAPGPENYVR 180 Query: 190 MGGVAGIWNGDLAKALADALVQDRSADTRAATGLERGGRKWAQRVIDAVAN 240 MGG+ IW GDL+ L +AL D R+ GLERGGRK A+ V DAVA+ Sbjct: 181 MGGLQAIWQGDLSARLVEALAAADPVDRRSTLGLERGGRKMARPVSDAVAS 231