BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3268.p (242 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776084.1| phosphoribosyl-dephospho-CoA transferase [He... 251 1e-64 ref|YP_004752367.1| phosphoribosyl-dephospho-CoA transferase [Co... 146 3e-33 ref|ZP_08273813.1| Phosphoribosyl-dephospho-CoA transferase [Oxa... 144 8e-33 ref|YP_001354249.1| malonate decarboxylase epsilon subunit [Jant... 137 1e-30 emb|CAL61644.2| putative phosphoribosyl-dephospho-CoA transferas... 134 1e-29 >ref|YP_003776084.1| phosphoribosyl-dephospho-CoA transferase [Herbaspirillum seropedicae SmR1] gb|ADJ64176.1| phosphoribosyl-dephospho-CoA transferase protein [Herbaspirillum seropedicae SmR1] Length = 237 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 143/215 (66%), Positives = 174/215 (80%) Query: 13 RHHLLWLSEAGWSRLLAGGCDARQQATLQHWQRMRWPLIVRRRDVEAKDEEICVGIALPP 72 RHHLLWL+EA W+RL D+R+QA L W++MRWP++VRR + +A +E+C GIALPP Sbjct: 6 RHHLLWLTEAAWTRLQTQSQDSREQAVLARWRQMRWPVVVRRAEADAGADELCAGIALPP 65 Query: 73 DAQGNKPRIALRVRADEVASSRAPFLLRDIVAARLAGLPAAWQAGLAELQEHMERAGIAL 132 DAQGNKPR+ALRV+ EVA+S AP+LLRDI AARL GLP WQAG+ LQ+ M+ AGIAL Sbjct: 66 DAQGNKPRLALRVQRAEVAASHAPYLLRDIAAARLHGLPQGWQAGMEALQQQMQAAGIAL 125 Query: 133 SVFGSLAWQAVTAQVYLRSSSDIDLLFQPRSQAQLEAGVRLLAWQAMFLPLDGEIVFPDG 192 +VFGSL+WQA+TAQ Y+RSSSDIDLLF P SQAQL G++LLA QA LPLDGEIVFPDG Sbjct: 126 AVFGSLSWQAITAQAYVRSSSDIDLLFAPDSQAQLAQGLQLLARQAAMLPLDGEIVFPDG 185 Query: 193 AAVSWKEWRQVAVLGSHPEGQVLVKRPASVALERV 227 AAVSWKEW+QV + + +V+VKRPA+VALE V Sbjct: 186 AAVSWKEWQQVMRKETKSDARVMVKRPAAVALEPV 220 >ref|YP_004752367.1| phosphoribosyl-dephospho-CoA transferase [Collimonas fungivorans Ter331] gb|AEK61544.1| Phosphoribosyl-dephospho-CoA transferase [Collimonas fungivorans Ter331] Length = 221 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 95/224 (42%), Positives = 130/224 (58%), Gaps = 9/224 (4%) Query: 12 SRHHLLWLSEAGWSRLLAGGCDARQQATLQHWQRMRWPLIVRRRDVEAKDEEICVGIALP 71 +RH L+WLS GW R A A +A L+ WQ WP ++RRR+ + +E++C+G+ALP Sbjct: 3 ARHSLVWLSADGWQRA-AQTAAAGNRAALERWQSHDWPAVLRRREPDTPEEQLCLGLALP 61 Query: 72 PDAQGNKPRIALRVRADEVASSRAPFLLRDIVAARLAGLPAAWQAGLAELQEHMERAGIA 131 PDA G+K RI + + +V P LR A L P AW L +GIA Sbjct: 62 PDANGDKARIPFQAQFGDVRRITDPLALR----AALPHAPPAWSRALNAFAGDCLHSGIA 117 Query: 132 LSVFGSLAWQAVTAQVYLRSSSDIDLLFQPRSQAQLEAGVRLLAWQAMFLPLDGEIVFPD 191 + ++GS AWQ +T Q YL +SDIDLLF P S + G+ LLA A LPLDGE+VF D Sbjct: 118 MRIYGSWAWQVLTQQSYLTRTSDIDLLFTPGSTEEFRRGIALLAQHAARLPLDGEVVFAD 177 Query: 192 GAAVSWKE-WRQVAVLGSHPEGQVLVKRPASVALERVGAVRASL 234 G AV+WKE W+ + G QVLVK ++V L + A+ ++L Sbjct: 178 GQAVAWKECWQALQGDGGQ---QVLVKARSTVRLVPMAALVSTL 218 >ref|ZP_08273813.1| Phosphoribosyl-dephospho-CoA transferase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32713.1| Phosphoribosyl-dephospho-CoA transferase [Oxalobacteraceae bacterium IMCC9480] Length = 214 Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats. Identities = 102/224 (45%), Positives = 132/224 (58%), Gaps = 15/224 (6%) Query: 12 SRHHLLWLSEAGWSRLLAGGCDARQQATLQHWQRMRWPLIVRRRDVEAKDEEICVGIALP 71 SRH L +LS AGW+ +AR A ++ W WPLIVRR + + ++C+G+ALP Sbjct: 3 SRHSLSFLSAAGWASARLQ-VEARHHAAIERWCAADWPLIVRRHEADCPTGQVCLGLALP 61 Query: 72 PDAQ-GNKPRIALRVRADEVASSRAPFLLRDIVAARLAGLPAAWQAGLAELQEHMERAGI 130 P+ + G K R+ LR+ DEV SR P L ++ RL LP AWQA L A + Sbjct: 62 PEPESGIKHRLPLRIAIDEVTRSRPPLTLAEV---RLV-LPPAWQAALPA-------ATM 110 Query: 131 ALSVFGSLAWQAVTAQVYLRSSSDIDLLFQPRSQAQLEAGVRLLAWQAMFLPLDGEIVFP 190 L+VFGS A QA+T YLR +SD+D+L QP + A L G+ LL LPLDGEIVFP Sbjct: 111 PLAVFGSTALQAITGLPYLRETSDLDILLQPTTLAALTDGLALLTQVEALLPLDGEIVFP 170 Query: 191 DGAAVSWKEWRQVAVLGSHPEGQVLVKRPASVALERVGAVRASL 234 GAAV+WKEWR + G+ +VL K V L RV A+ ASL Sbjct: 171 SGAAVAWKEWRAASAQGA--AMRVLAKHDEGVMLVRVDALLASL 212 >ref|YP_001354249.1| malonate decarboxylase epsilon subunit [Janthinobacterium sp. Marseille] gb|ABR89263.1| malonate decarboxylase epsilon subunit [Janthinobacterium sp. Marseille] Length = 223 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 96/225 (42%), Positives = 127/225 (56%), Gaps = 8/225 (3%) Query: 13 RHHLLWLSEAGWSRLLAGGCDARQQATLQHWQRMRWPLIVRRRDVEAKDEEICVGIALPP 72 RH +WLS GW R A D ++ W WPL+VRR DV + E + VG+ALPP Sbjct: 4 RHKRIWLSSRGWQRA-AAAVDKVHLPDMERWAANDWPLVVRRSDVGFEVESLAVGLALPP 62 Query: 73 DA-QGNKPRIALRVRADEVASSRAPFLLRDIVAARLAGLPAAWQAGLAELQEHMERAGIA 131 DA G K RI L V ++VA P +A LP AWQ A+L + A + Sbjct: 63 DADSGRKVRIPLSVHPNDVARHETPLAFVHAASA----LPLAWQPAFADLSHELTAAQLE 118 Query: 132 LSVFGSLAWQAVTAQVYLRSSSDIDLLFQPRSQAQLEAGVRLLAWQAMFLPLDGEIVFPD 191 V+GS+A QA+T Y+ ++SDID+LF P + AQL+ G+ LL A LPLDGEIVFP Sbjct: 119 FRVYGSVALQAMTGLPYVTATSDIDILFYPCTHAQLQQGLHLLQLYAQSLPLDGEIVFPS 178 Query: 192 GAAVSWKEWRQVAVLGSHPEGQVLVKRPASVALERVGAVRASLPQ 236 G AV+WKEW V + S + +VLVK +V L V A+ + L + Sbjct: 179 GHAVAWKEW--VEAVKSPDKVKVLVKSMRTVNLMDVTALLSELEE 221 >emb|CAL61644.2| putative phosphoribosyl-dephospho-CoA transferase [Herminiimonas arsenicoxydans] Length = 222 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 92/225 (40%), Positives = 125/225 (55%), Gaps = 8/225 (3%) Query: 13 RHHLLWLSEAGWSRLLAGGCDARQQATLQHWQRMRWPLIVRRRDVEAKDEEICVGIALPP 72 RH+ +WLS GW A A L W WP IVRR D +A+ + +C+G+A PP Sbjct: 4 RHNRVWLSANGWQAACAR-LPAAHAKELMRWAEHDWPAIVRRSDADAQPDTLCLGVAPPP 62 Query: 73 DA-QGNKPRIALRVRADEVASSRAPFLLRDIVAARLAGLPAAWQAGLAELQEHMERAGIA 131 + G K RI V A ++ AP +L +A + L AW+ + L G+ Sbjct: 63 EPDSGVKTRIPFTVGAADIVRHEAPLVL----SAAESALSPAWRCAFSALAVEAGSRGLE 118 Query: 132 LSVFGSLAWQAVTAQVYLRSSSDIDLLFQPRSQAQLEAGVRLLAWQAMFLPLDGEIVFPD 191 V+GS+A QA+T+ YL +SSDIDLLF PR+QAQL+ G+ LL+ A LPLDGEIVFP Sbjct: 119 FRVYGSVALQAITSLPYLAASSDIDLLFYPRTQAQLQEGMALLSLYAKQLPLDGEIVFPS 178 Query: 192 GAAVSWKEWRQVAVLGSHPEGQVLVKRPASVALERVGAVRASLPQ 236 AV+WKEW Q P +VL K +S+ L +V + A L + Sbjct: 179 ARAVAWKEWAQAFANPVRP--RVLAKGMSSLNLVQVADLLAELEK 221