BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3260.p (172 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775098.1| transcription regulator protein [Herbaspiril... 315 1e-84 ref|XP_002538418.1| Bkd operon transcriptional regulator, putati... 303 7e-81 ref|YP_003167869.1| AsnC family transcriptional regulator [Candi... 208 2e-52 ref|YP_002353796.1| AsnC family transcriptional regulator [Thaue... 197 6e-49 ref|YP_933911.1| bkd operon transcriptional regulator [Azoarcus ... 184 5e-45 >ref|YP_003775098.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ63190.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 172 Score = 315 bits (808), Expect = 1e-84, Method: Composition-based stats. Identities = 171/172 (99%), Positives = 171/172 (99%) Query: 1 MSIINVDRYDLALLTELQRDGHITNSALGLKVHLSTSQISRRVQRLEEAHVIERYTAVLD 60 MSIINVDRYDLALLTELQRDGHITNSALG KVHLSTSQISRRVQRLEEAHVIERYTAVLD Sbjct: 1 MSIINVDRYDLALLTELQRDGHITNSALGQKVHLSTSQISRRVQRLEEAHVIERYTAVLD 60 Query: 61 PAVVGLGVTAFTTVTLDRQGETRGELFEKAVETMPEVTECFSVTGEGDYILRIVAPDLAA 120 PAVVGLGVTAFTTVTLDRQGETRGELFEKAVETMPEVTECFSVTGEGDYILRIVAPDLAA Sbjct: 61 PAVVGLGVTAFTTVTLDRQGETRGELFEKAVETMPEVTECFSVTGEGDYILRIVAPDLAA 120 Query: 121 FSEFMMTRLLRLPGVTNVKSNITLKKVKQSHELPLEHVMQPVKSRQRIRFSQ 172 FSEFMMTRLLRLPGVTNVKSNITLKKVKQSHELPLEHVMQPVKSRQRIRFSQ Sbjct: 121 FSEFMMTRLLRLPGVTNVKSNITLKKVKQSHELPLEHVMQPVKSRQRIRFSQ 172 >ref|XP_002538418.1| Bkd operon transcriptional regulator, putative [Ricinus communis] gb|EEF23965.1| Bkd operon transcriptional regulator, putative [Ricinus communis] Length = 172 Score = 303 bits (776), Expect = 7e-81, Method: Composition-based stats. Identities = 163/172 (94%), Positives = 167/172 (97%) Query: 1 MSIINVDRYDLALLTELQRDGHITNSALGLKVHLSTSQISRRVQRLEEAHVIERYTAVLD 60 MSIINVDRYDLALLTELQRDGHITNSALG KVHLSTSQISRRVQRLEEAHVIERYTAVLD Sbjct: 1 MSIINVDRYDLALLTELQRDGHITNSALGQKVHLSTSQISRRVQRLEEAHVIERYTAVLD 60 Query: 61 PAVVGLGVTAFTTVTLDRQGETRGELFEKAVETMPEVTECFSVTGEGDYILRIVAPDLAA 120 AVVGLGVTAFTTVTLDRQGETRGELFEK+VE MPEV ECFS+TGE DYILRIVAPDLA+ Sbjct: 61 AAVVGLGVTAFTTVTLDRQGETRGELFEKSVEGMPEVIECFSITGEADYILRIVAPDLAS 120 Query: 121 FSEFMMTRLLRLPGVTNVKSNITLKKVKQSHELPLEHVMQPVKSRQRIRFSQ 172 FSEFMMT+LLRLPGVTNVKSNITLKKVKQSHELPLEHVMQPVKSRQRIRFSQ Sbjct: 121 FSEFMMTQLLRLPGVTNVKSNITLKKVKQSHELPLEHVMQPVKSRQRIRFSQ 172 >ref|YP_003167869.1| AsnC family transcriptional regulator [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gb|ACV35940.1| transcriptional regulator, AsnC family [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 173 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 104/172 (60%), Positives = 132/172 (76%) Query: 1 MSIINVDRYDLALLTELQRDGHITNSALGLKVHLSTSQISRRVQRLEEAHVIERYTAVLD 60 MS I +DRYDLALL LQR G+ TN+ LG ++ LS SQISRR+QRLEE VI Y A+L Sbjct: 1 MSKITIDRYDLALLDALQRKGNATNATLGEQIRLSASQISRRIQRLEEDGVIAAYVAMLA 60 Query: 61 PAVVGLGVTAFTTVTLDRQGETRGELFEKAVETMPEVTECFSVTGEGDYILRIVAPDLAA 120 P+ +GLGVTAF V L+R G++ E FE A+ MPEV +CFSV+G+ DY+LRIV PDLAA Sbjct: 61 PSALGLGVTAFAQVILERHGDSTNEAFENAIAAMPEVMDCFSVSGDADYMLRIVVPDLAA 120 Query: 121 FSEFMMTRLLRLPGVTNVKSNITLKKVKQSHELPLEHVMQPVKSRQRIRFSQ 172 FSE MM RLLRLPGV +K++I L+ VKQ+H LPL+H+ QP KS +RIR+++ Sbjct: 121 FSELMMKRLLRLPGVARIKTSIALQTVKQTHVLPLDHLTQPNKSSKRIRYAE 172 >ref|YP_002353796.1| AsnC family transcriptional regulator [Thauera sp. MZ1T] gb|ACK52900.1| transcriptional regulator, AsnC family [Thauera sp. MZ1T] Length = 173 Score = 197 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 98/158 (62%), Positives = 120/158 (75%) Query: 1 MSIINVDRYDLALLTELQRDGHITNSALGLKVHLSTSQISRRVQRLEEAHVIERYTAVLD 60 MS +++DR+DLALL LQR G TN+ LG VHLS SQ+SRR+QRL+EA +I Y A+LD Sbjct: 1 MSTLSIDRHDLALLDALQRSGDATNATLGEAVHLSASQVSRRLQRLQEAGLITGYAALLD 60 Query: 61 PAVVGLGVTAFTTVTLDRQGETRGELFEKAVETMPEVTECFSVTGEGDYILRIVAPDLAA 120 PA +GL V AF V L+R G R E FE V +PEV ECFSV+G DY+LRIVAPDLAA Sbjct: 61 PAALGLDVMAFAHVVLERHGGVRTEAFEDGVAALPEVLECFSVSGNADYVLRIVAPDLAA 120 Query: 121 FSEFMMTRLLRLPGVTNVKSNITLKKVKQSHELPLEHV 158 FSE MM R+LRLPG+ N+K++I L KVKQ+H LPLEH+ Sbjct: 121 FSELMMKRVLRLPGIANIKTDIVLGKVKQTHVLPLEHI 158 >ref|YP_933911.1| bkd operon transcriptional regulator [Azoarcus sp. BH72] emb|CAL95024.1| bkd operon transcriptional regulator [Azoarcus sp. BH72] Length = 160 Score = 184 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 91/156 (58%), Positives = 120/156 (76%) Query: 4 INVDRYDLALLTELQRDGHITNSALGLKVHLSTSQISRRVQRLEEAHVIERYTAVLDPAV 63 + +D+YDL LL LQR+GH +N+ L ++HLS SQ+SRRVQRLE+A IERY+A+L PA Sbjct: 1 MEIDKYDLHLLDALQRNGHASNAELAEQIHLSPSQVSRRVQRLEQAGYIERYSALLRPAA 60 Query: 64 VGLGVTAFTTVTLDRQGETRGELFEKAVETMPEVTECFSVTGEGDYILRIVAPDLAAFSE 123 VGLGVTAFT V+L+R E + F AV M EV ECF++TGE DY+LRIVAPDLA+ S Sbjct: 61 VGLGVTAFTAVSLERHAEAHTDAFNAAVAAMDEVLECFAITGEADYLLRIVAPDLASLSA 120 Query: 124 FMMTRLLRLPGVTNVKSNITLKKVKQSHELPLEHVM 159 FM+ RL+RL GV +VKSNI L ++K++ LPL+H++ Sbjct: 121 FMLHRLMRLTGVRSVKSNIVLAEIKRTTRLPLDHLL 156