BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3258.p         (206 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776079.1| acyl-CoA thioester hydrolase [Herbaspirillum...   312   2e-83
gb|ADU90706.1| putative acyl CoA thioester hydrolase [Collimonas...   265   4e-69
ref|YP_001791542.1| thioesterase superfamily protein [Leptothrix...   261   3e-68
ref|YP_003279500.1| thioesterase superfamily protein [Comamonas ...   258   4e-67
ref|ZP_03541945.1| thioesterase superfamily protein [Comamonas t...   257   7e-67

>ref|YP_003776079.1| acyl-CoA thioester hydrolase [Herbaspirillum seropedicae SmR1]
 gb|ADJ64171.1| acyl-CoA thioester hydrolase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 159

 Score =  312 bits (800), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 157/159 (98%), Positives = 159/159 (100%)

Query: 43  MDLPSHQLTMTVLMTPDMANFAGNVHGGTILKLLDQVAYACGSRYAGQYVVTLSVDQVMF 102
           MDLPSHQLTMTVLMTPDMANFAGNVHGGTILKLLDQVAYACGSRYAGQYVVTLSVDQVMF
Sbjct: 1   MDLPSHQLTMTVLMTPDMANFAGNVHGGTILKLLDQVAYACGSRYAGQYVVTLSVDQVMF 60

Query: 103 RQPIHVGELVTFLASVNHTGKSSMEIGIKVVAENIRTQETRHVNSCFFTMVAVDDQRKPI 162
           RQPIHVGELVTFLASVNHTGKSSMEIGIKVVAENIRTQETRHVNSCFFTMVAVDDQRKPI
Sbjct: 61  RQPIHVGELVTFLASVNHTGKSSMEIGIKVVAENIRTQETRHVNSCFFTMVAVDDQRKPI 120

Query: 163 PVPPLRPFSQEEKRRFDAAVIRKSLRQELARRYEEVKPG 201
           PVPPLRPFSQEEKRRF+AAVIRKSLRQELARRY+EVKPG
Sbjct: 121 PVPPLRPFSQEEKRRFEAAVIRKSLRQELARRYDEVKPG 159


>gb|ADU90706.1| putative acyl CoA thioester hydrolase [Collimonas sp. MPS11E8]
          Length = 157

 Score =  265 bits (676), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 130/155 (83%), Positives = 143/155 (92%)

Query: 45  LPSHQLTMTVLMTPDMANFAGNVHGGTILKLLDQVAYACGSRYAGQYVVTLSVDQVMFRQ 104
           +PSHQLTMT+LM+PDMANF+GNVHGG ILKLLDQVAYAC SRYA QYVVTLSVDQV FRQ
Sbjct: 1   MPSHQLTMTILMSPDMANFSGNVHGGAILKLLDQVAYACASRYAAQYVVTLSVDQVTFRQ 60

Query: 105 PIHVGELVTFLASVNHTGKSSMEIGIKVVAENIRTQETRHVNSCFFTMVAVDDQRKPIPV 164
           PIHVGELV+FLASVNHTG SSME+GIKVVAE+IRTQ  RHVNSCFFTMVAVD +R+PI V
Sbjct: 61  PIHVGELVSFLASVNHTGTSSMEVGIKVVAEDIRTQVVRHVNSCFFTMVAVDHERRPIAV 120

Query: 165 PPLRPFSQEEKRRFDAAVIRKSLRQELARRYEEVK 199
           PPLRPFS EEKRRF+ A++RK LRQELARR+EEVK
Sbjct: 121 PPLRPFSAEEKRRFEDAILRKQLRQELARRFEEVK 155


>ref|YP_001791542.1| thioesterase superfamily protein [Leptothrix cholodnii SP-6]
 gb|ACB34777.1| thioesterase superfamily protein [Leptothrix cholodnii SP-6]
          Length = 167

 Score =  261 bits (668), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 128/157 (81%), Positives = 142/157 (90%)

Query: 43  MDLPSHQLTMTVLMTPDMANFAGNVHGGTILKLLDQVAYACGSRYAGQYVVTLSVDQVMF 102
           MDLP+HQLTMTVLMTPD ANFAGNVHGGTILKLLDQVAYAC SRYAG+YVVTLSVDQVMF
Sbjct: 1   MDLPAHQLTMTVLMTPDTANFAGNVHGGTILKLLDQVAYACASRYAGRYVVTLSVDQVMF 60

Query: 103 RQPIHVGELVTFLASVNHTGKSSMEIGIKVVAENIRTQETRHVNSCFFTMVAVDDQRKPI 162
           RQ +HVG+LV+FLASVN+TG SSMEIGIKV+AENIRTQE RHVNSCFFTMVAVDD RKP+
Sbjct: 61  RQSVHVGDLVSFLASVNYTGTSSMEIGIKVIAENIRTQEKRHVNSCFFTMVAVDDDRKPV 120

Query: 163 PVPPLRPFSQEEKRRFDAAVIRKSLRQELARRYEEVK 199
            VP LRPFS +E+RR+ AA +RK LRQE A R+E V+
Sbjct: 121 AVPALRPFSPDERRRYAAAELRKQLRQEFALRFEAVR 157


>ref|YP_003279500.1| thioesterase superfamily protein [Comamonas testosteroni CNB-2]
 ref|ZP_07046700.1| thioesterase superfamily protein [Comamonas testosteroni S44]
 gb|ACY34204.1| thioesterase superfamily [Comamonas testosteroni CNB-2]
 gb|EFI59819.1| thioesterase superfamily protein [Comamonas testosteroni S44]
          Length = 159

 Score =  258 bits (658), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 126/157 (80%), Positives = 141/157 (89%)

Query: 43  MDLPSHQLTMTVLMTPDMANFAGNVHGGTILKLLDQVAYACGSRYAGQYVVTLSVDQVMF 102
           M+ PSHQL+MTVLM+PDMANF+GNVHGG ILKLLDQVAYAC SRYAG+YVVTLSVDQVMF
Sbjct: 1   MNTPSHQLSMTVLMSPDMANFSGNVHGGAILKLLDQVAYACASRYAGRYVVTLSVDQVMF 60

Query: 103 RQPIHVGELVTFLASVNHTGKSSMEIGIKVVAENIRTQETRHVNSCFFTMVAVDDQRKPI 162
            QPIHVGELVTFLASVNHTGKSSMEIGIKV+AE IR+Q  RHVNSCFFTMVAVDD +KP 
Sbjct: 61  LQPIHVGELVTFLASVNHTGKSSMEIGIKVIAEEIRSQVVRHVNSCFFTMVAVDDDKKPA 120

Query: 163 PVPPLRPFSQEEKRRFDAAVIRKSLRQELARRYEEVK 199
           PVPPL+  + EEKRR+DAA+IRK LR+ELA R+ E +
Sbjct: 121 PVPPLQLETDEEKRRWDAAIIRKELRKELAERFAETR 157


>ref|ZP_03541945.1| thioesterase superfamily protein [Comamonas testosteroni KF-1]
 gb|EED66231.1| thioesterase superfamily protein [Comamonas testosteroni KF-1]
          Length = 159

 Score =  257 bits (656), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 125/157 (79%), Positives = 141/157 (89%)

Query: 43  MDLPSHQLTMTVLMTPDMANFAGNVHGGTILKLLDQVAYACGSRYAGQYVVTLSVDQVMF 102
           M+ PSHQL+MTVLM+PDMANF+GNVHGG ILKLLDQVAYAC SRYAG+YVVTLSVDQVMF
Sbjct: 1   MNTPSHQLSMTVLMSPDMANFSGNVHGGAILKLLDQVAYACASRYAGRYVVTLSVDQVMF 60

Query: 103 RQPIHVGELVTFLASVNHTGKSSMEIGIKVVAENIRTQETRHVNSCFFTMVAVDDQRKPI 162
            QPIHVGELVTFLASVNHTGKSSMEIGIKV+AE IR+Q  RHVNSCFFTMVAVDD +KP 
Sbjct: 61  LQPIHVGELVTFLASVNHTGKSSMEIGIKVIAEEIRSQVVRHVNSCFFTMVAVDDDKKPA 120

Query: 163 PVPPLRPFSQEEKRRFDAAVIRKSLRQELARRYEEVK 199
           PVPPL+  + EEKRR+DAA++RK LR+ELA R+ E +
Sbjct: 121 PVPPLQLETDEEKRRWDAAIVRKELRKELAERFAETR 157