BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3247.p (519 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773620.1| TPR repeat, SEL1 subfamily protein [Herbaspi... 428 e-117 ref|YP_003777671.1| hypothetical protein Hsero_4294 [Herbaspiril... 361 2e-97 ref|ZP_08273872.1| hypothetical protein IMCC9480_2154 [Oxalobact... 347 4e-93 ref|YP_004754679.1| Sel1-like repeat protein [Collimonas fungivo... 336 5e-90 ref|ZP_04577601.1| conserved hypothetical protein [Oxalobacter f... 335 1e-89 >ref|YP_003773620.1| TPR repeat, SEL1 subfamily protein [Herbaspirillum seropedicae SmR1] gb|ADJ61712.1| TPR repeat, SEL1 subfamily protein [Herbaspirillum seropedicae SmR1] Length = 513 Score = 428 bits (1101), Expect = e-117, Method: Composition-based stats. Identities = 237/518 (45%), Positives = 337/518 (65%), Gaps = 6/518 (1%) Query: 1 MAARNDLAILKAARTGAADAQLALGKRYYLGSGSLPQSVETAFYWLERAARQGLSDAWKM 60 MA R +LA++KAAR G + AQLALG+RY G LP+S TAFYWL RAA+QG+ DAW + Sbjct: 1 MATREELAVIKAARAGESRAQLALGRRYLNGGSGLPRSKGTAFYWLRRAAQQGVDDAWMI 60 Query: 61 IGRAVPYELVLTMSRPYEAAIWYERAFDSGEFKAGVVFSKLVLEHPQQFTERIKYKAVTV 120 IGR + YE V +S P EAA+WYE+AF++G +AG++F++LVL++ +F +A+ Sbjct: 61 IGRNITYEQVKELSPPREAAVWYEKAFEAGVPQAGLIFARLVLDNTSEFDSNTHARAIAA 120 Query: 121 LKQLAERNDHEAQWLLAKHLAHVEVQHGSSEESGGTLTHQKSGAKDHWIKQAALAGVTEA 180 L LA R+DHEAQWLLA+ + +HG G +D + +AA AG+ EA Sbjct: 121 LSLLASRDDHEAQWLLAQQMQ----RHGQPMLPGAAAA--SPAYEDKLMLEAARAGIEEA 174 Query: 181 QFSLLEKNWTVGDYDSFFENSVSLVERIYKEKEYQLRKIRDVTPSSPPFSLTKDEARLLL 240 Q+++L+K W GD SF + + +R+ + ++ L+ +EA LLL Sbjct: 175 QYAVLDKAWQQGDEASFARGAQRVTQRLLARHANAVAQLEKDGQIHGAVQLSDEEATLLL 234 Query: 241 RHSQILLQHPTPDIAYSQRLLELAALSQCEEAQYRLGMLHARINHDCERVFPDYGQANYL 300 R+ Q L+ +PD Q L ELAA+ +A LG+L A+I+ ER+F ++G AN+ Sbjct: 235 RYGQWRLRGASPDPDELQILFELAAMGGNAQACLELGLLCAKIDRQGERIFMEHGLANFK 294 Query: 301 AAVPWLNVAGERGLAEAWHALSMIFSKAEYYQRNLPLARQHLKRSAEMGFAVAQFEYAQY 360 A+ WL AGE G+A+ WHAL+ I+S++ Y QRNL +A+ +L+++A+ G AQ E AQ Sbjct: 295 KALHWLERAGEAGVAQGWHALARIYSRSIYSQRNLQVAQHYLEKAAQAGLVEAQCELAQV 354 Query: 361 LWRTRRDDPMYDIRALFWWKKSTDQGHRKAQLVSTAFSSEASGETFATEIAKALTPRLRA 420 WR RRDDP+ D++AL+WW+++ QG AQ AF+++ + +A + LT +LR Sbjct: 355 CWRHRRDDPLNDVKALYWWQQAAAQGEPTAQAALDAFAAQPDAQGWALQAQALLTDKLRN 414 Query: 421 AYPFLSARLDLAAAFNLSKAEALLIDVRRADYGHCLEVDISSYHGRSKRRLILVESDKQR 480 + PFLSAR++LAA F L+K EALLID++ ADYGHCL VDI ++H RSKRRLI V++D QR Sbjct: 415 SSPFLSARIELAATFGLTKPEALLIDIKAADYGHCLVVDICAHHARSKRRLIAVQTDAQR 474 Query: 481 ISLNLISRLFTDVDASFEGPEGNYRQRQYRLKTVLSEL 518 +LN +SRLF DVD F+G EGNYRQRQYRL+T L Sbjct: 475 ATLNRVSRLFGDVDCGFDGLEGNYRQRQYRLRTTFPGL 512 >ref|YP_003777671.1| hypothetical protein Hsero_4294 [Herbaspirillum seropedicae SmR1] gb|ADJ65763.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 532 Score = 361 bits (927), Expect = 2e-97, Method: Composition-based stats. Identities = 228/518 (44%), Positives = 318/518 (61%), Gaps = 2/518 (0%) Query: 1 MAARNDLAILKAARTGAADAQLALGKRYYLGSGSLPQSVETAFYWLERAARQGLSDAWKM 60 MA R DLAI++AAR G A AQL LGKRY G LPQS+ TAF+WLERAARQ L+DAW + Sbjct: 1 MANREDLAIIRAARAGQAAAQLTLGKRYLFGGNGLPQSLSTAFHWLERAARQELADAWML 60 Query: 61 IGRAVPYELVLTMSRPYEAAIWYERAFDSGEFKAGVVFSKLVLEHPQQFTERIKYKAVTV 120 I +PYE+V+T++RP EAA WYERAF+ G KAG+ F++LVLE + +K +A+ V Sbjct: 61 IAEHIPYEVVVTLTRPQEAAQWYERAFEGGMTKAGLAFARLVLESAGEPGAELKARAIRV 120 Query: 121 LKQLAERNDHEAQWLLAKHLAHVEVQHGSSEESGGTLTHQKSGAK-DHWIKQAALAGVTE 179 L+ +A D +AQWLLA+ + S+ + W ++AA AG+ + Sbjct: 121 LQVVAREGDPDAQWLLARQGSQPAEPAASAAVAAPAPAPDLPPEDLQQWTQKAADAGIEQ 180 Query: 180 AQFSLLEKNWTVGDYDSFFENSVSLVERIYKEKEYQLRKIRDVTPSSPPFSLTKDEARLL 239 AQ +L + W D F + + L +++ ++ E + ++ + +L LL Sbjct: 181 AQHALADAAWQQADLIQFRQRAQPLADKLLRQYEALVAQLNGPAEALAT-ALGPQNIVLL 239 Query: 240 LRHSQILLQHPTPDIAYSQRLLELAALSQCEEAQYRLGMLHARINHDCERVFPDYGQANY 299 R +Q+ L D+ +Q+LLELAAL+ +AQ LG+L+ R++ R FP G ANY Sbjct: 240 RRLAQVHLGEKRADLQQAQQLLELAALACDRDAQLALGLLYGRVDEQGVRCFPGLGSANY 299 Query: 300 LAAVPWLNVAGERGLAEAWHALSMIFSKAEYYQRNLPLARQHLKRSAEMGFAVAQFEYAQ 359 A+ WL +AGE+G+A AW+ LS I+ K E+ QRNL + +L+R+AEMG AQ E Sbjct: 300 KKAIRWLTLAGEQGMAAAWYVLSRIYLKPEFSQRNLADVQHYLERAAEMGHVAAQLECGI 359 Query: 360 YLWRTRRDDPMYDIRALFWWKKSTDQGHRKAQLVSTAFSSEASGETFATEIAKALTPRLR 419 WR RRD+ D+RAL+W +K+ QG +AQ + + +A LT Sbjct: 360 GAWRNRRDEAGNDVRALYWLQKAASQGDEQAQALLDKVADRPQAAAWAVLARAQLTREQV 419 Query: 420 AAYPFLSARLDLAAAFNLSKAEALLIDVRRADYGHCLEVDISSYHGRSKRRLILVESDKQ 479 A+PFL+AR++LA F L++ EALLID+++AD GHCL VDI S + RSKRRLI+VE+ +Q Sbjct: 420 NAHPFLAARIELATLFGLTRPEALLIDLKQADRGHCLMVDIRSQYARSKRRLIMVENGEQ 479 Query: 480 RISLNLISRLFTDVDASFEGPEGNYRQRQYRLKTVLSE 517 R +LN I RLF DVD GPEGNYRQR YRLKTVL + Sbjct: 480 RGALNRIGRLFEDVDCGPSGPEGNYRQRLYRLKTVLPQ 517 >ref|ZP_08273872.1| hypothetical protein IMCC9480_2154 [Oxalobacteraceae bacterium IMCC9480] gb|EGF32676.1| hypothetical protein IMCC9480_2154 [Oxalobacteraceae bacterium IMCC9480] Length = 522 Score = 347 bits (889), Expect = 4e-93, Method: Composition-based stats. Identities = 213/529 (40%), Positives = 300/529 (56%), Gaps = 19/529 (3%) Query: 1 MAARNDLAILKAARTGAADAQLALGKRYYLGSGSLPQSVETAFYWLERAARQGLSDAWKM 60 MA R +L +++AAR G A AQLALGKRY G LP+S+ TA YWL+RAA Q +AW + Sbjct: 1 MANREELLVIRAARAGQAPAQLALGKRYLFGGAGLPKSIATALYWLDRAAHQQQDEAWLL 60 Query: 61 IGRAVPYELVLTMSRPYEAAIWYERAFDSGEFKAGVVFSKLVLEHPQQFTERI-KYKAVT 119 IG +P+E ++P +WYERAFDSG +AG+V +KLVL T I + KA Sbjct: 61 IGSHIPFEAASRSAQPASLCVWYERAFDSGVLQAGLVLAKLVLAQSGDCTSDILRRKAWM 120 Query: 120 VLKQLAERNDHEAQWLLAKHLAHVEVQHGSSEESGGTLTHQKSGAKD-----------HW 168 L+ +A EAQWL+A+ + H G+ + + + + K W Sbjct: 121 ALEAVAHAGFGEAQWLMAQLIGHANGCDGTDLRALSSHSFHSTILKMPACDTAKKSVLEW 180 Query: 169 IKQAALAGVTEAQFSLLEKNWTVGDYDSFFENSVSLVERIYKEKEYQLRKIRDVTPSSPP 228 AA GVT AQ +L E W G++D F + ++ L + + Q R + D Sbjct: 181 TVLAAGGGVTRAQHALAEHAWQAGNHDDFLQWALPLARQAVARR--QSRPMTDALEEP-- 236 Query: 229 FSLTKDEARLLLRHSQILLQHPTPDIAYSQRLLELAALSQCEEAQYRLGMLHARINHDCE 288 D+ LL R S++L+ D A +R LE+AA ++ LG+ R++ + Sbjct: 237 ---VIDDTSLLARCSEVLMARGNVDAAELERFLEVAASGGDRQSCLALGLWFGRMDGNGT 293 Query: 289 RVFPDYGQANYLAAVPWLNVAGERGLAEAWHALSMIFSKAEYYQRNLPLARQHLKRSAEM 348 R+ G ANY A+ WL AGE+GLAEAW A S I+ K E+ QRNL + +++++AE Sbjct: 294 RLTEVRGLANYKKALRWLVAAGEQGLAEAWFATSRIYLKPEFSQRNLLDSYYYVQKAAEA 353 Query: 349 GFAVAQFEYAQYLWRTRRDDPMYDIRALFWWKKSTDQGHRKAQLVSTAFSSEASGETFAT 408 G VAQ E WR+RR+D D+ A FW +K+ QG+++AQ + + A +A Sbjct: 354 GHTVAQLELGIAAWRSRRNDQSKDVEAAFWLQKAAAQGNQEAQQLLRKIADGAVPALWAE 413 Query: 409 EIAKALTPRLRAAYPFLSARLDLAAAFNLSKAEALLIDVRRADYGHCLEVDISSYHGRSK 468 + L PFL ARL+LAA F LS+AEALL++V AD GHCL +DI H RSK Sbjct: 414 SAREKLVHDRNRTAPFLVARLELAAVFGLSRAEALLLNVNAADCGHCLLIDIRDVHPRSK 473 Query: 469 RRLILVESDKQRISLNLISRLFTDVDASFEGPEGNYRQRQYRLKTVLSE 517 RRLIL++S++QR +L+ I RLF DVD S +GPEGNYRQR YRL+ ++ E Sbjct: 474 RRLILIQSNEQRQALSRIVRLFDDVDCSIKGPEGNYRQRLYRLRMLVPE 522 >ref|YP_004754679.1| Sel1-like repeat protein [Collimonas fungivorans Ter331] gb|AAT42413.1| hypothetical protein [Collimonas fungivorans Ter331] gb|AEK63856.1| Sel1-like repeat protein [Collimonas fungivorans Ter331] Length = 536 Score = 336 bits (862), Expect = 5e-90, Method: Composition-based stats. Identities = 221/526 (42%), Positives = 308/526 (58%), Gaps = 12/526 (2%) Query: 1 MAARNDLAILKAARTGAADAQLALGKRYYLGSGSLPQSVETAFYWLERAARQGLSDAWKM 60 MA R DLAI++AAR G A AQLALGKRY G LPQS+ TA +WL+RAA+Q S+AW + Sbjct: 1 MAKREDLAIIRAARAGQAAAQLALGKRYLFGGNGLPQSLSTALHWLDRAAQQQESEAWML 60 Query: 61 IGRAVPYELVLTMSRPYEAAIWYERAFDSGEFKAGVVFSKLVLEHP---QQFTERIKYKA 117 IG +P E+ S P +WYERAFD+G +AG+V ++LVL Q + K Sbjct: 61 IGSHIPLEVAEAASDPLALCVWYERAFDAGLMQAGLVLAQLVLNREGGNPQVLPGLHGKV 120 Query: 118 VTVLKQLAERNDHEAQWLLAKHL--AHVEVQHGSSEESGGTLTHQKSGAKDH------WI 169 + L+ A EAQWLLA+H A + + SE+ G + + +K W Sbjct: 121 IKALETAAHAGIAEAQWLLAQHADSAPLPGRAAPSEKLAGVQSETQPESKPEQDATLKWT 180 Query: 170 KQAALAGVTEAQFSLLEKNWTVGDYDSFFENSVSLVERIYKEKEYQLRKIRDVTPSSPPF 229 +AA AGV +AQ SL + W D+ F E ++ L R E+ + +V + Sbjct: 181 ARAADAGVMQAQQSLAQLAWEKADWPVFLERALPLA-RALSEQYADILAQLNVPSETLAR 239 Query: 230 SLTKDEARLLLRHSQILLQHPTPDIAYSQRLLELAALSQCEEAQYRLGMLHARINHDCER 289 L ++ LLLR +Q+L D A Q+ LELAA + AQ LG+ +AR+N D ER Sbjct: 240 QLGEENLSLLLRSAQVLQTSDGFDAAEVQQFLELAAYGDDKAAQLALGLWYARMNSDGER 299 Query: 290 VFPDYGQANYLAAVPWLNVAGERGLAEAWHALSMIFSKAEYYQRNLPLARQHLKRSAEMG 349 + G ANY A+ WL +AGE GLA+AW+ALS I+ K+E+ QRNL ++HL+ +AEMG Sbjct: 300 LLVGTGSANYKKAIRWLTLAGEAGLADAWYALSRIYLKSEFSQRNLVDMQRHLEHAAEMG 359 Query: 350 FAVAQFEYAQYLWRTRRDDPMYDIRALFWWKKSTDQGHRKAQLVSTAFSSEASGETFATE 409 AQ E WR RR+ D+RA++W +K+ QG +A + + A +A Sbjct: 360 HRAAQLECGLSAWRNRREKLANDVRAVYWLQKAAAQGSGEAANLLARIADSAQPAAWAEA 419 Query: 410 IAKALTPRLRAAYPFLSARLDLAAAFNLSKAEALLIDVRRADYGHCLEVDISSYHGRSKR 469 + LT A+PFL+AR++LA F LS+ EALL+D+ +AD GHCL +DI +++ RSKR Sbjct: 420 AKQQLTREQVKAHPFLAARIELAVLFGLSRPEALLLDLNQADCGHCLVIDIRAHYARSKR 479 Query: 470 RLILVESDKQRISLNLISRLFTDVDASFEGPEGNYRQRQYRLKTVL 515 RLIL+++ +R +L I+RLF DVD GPEGNYRQR YR KT + Sbjct: 480 RLILIQTGDERQALTRIARLFEDVDCGPNGPEGNYRQRLYRFKTAV 525 >ref|ZP_04577601.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gb|EEO28563.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 536 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 199/518 (38%), Positives = 306/518 (59%), Gaps = 28/518 (5%) Query: 1 MAARNDLAILKAARTGAADAQLALGKRYYLGSGSLPQSVETAFYWLERAARQGLSDAWKM 60 MA+R +L +L+ ARTG +Q ALG+ Y GS SLPQS+ TA +WL RAARQG + A ++ Sbjct: 24 MASREELQLLRKARTGDTASQFALGELYLFGSKSLPQSLTTALHWLGRAARQGDAAAKRL 83 Query: 61 IGRAVPYELVLTMSRPYEAAIWYERAFDSGEFKAGVVFSKLVLEHPQQFTERIKYKAVTV 120 IG +PYE+ WY A D G ++AG+V +KL+L + + +A+ + Sbjct: 84 IGNHIPYEVANLHPDRQLLERWYRDALDEGCYRAGLVLAKLLLSSGTATDSKKRSEAIAI 143 Query: 121 LKQLAERNDHEAQWLLAKHLAHVEVQHGSSEESGGTLTHQKSGAKDHWIKQAALAGVTEA 180 L+++ + + EAQWLLA E+ S+ S G+ W AA AG+ +A Sbjct: 144 LEKIVDHDIPEAQWLLA------ELVKNSNRYS------PLKGSALKWTACAANAGIVDA 191 Query: 181 QFSLLEKNWTVGDYDSFFENSVSLVERIYKEKEYQLRKIRDVTPSSPPFSLTKD--EARL 238 Q +L+E W DY++F ++++ + + + + P + D ARL Sbjct: 192 QIALIEHAWKNADYETFLQHALPIARSLLQS-------------GAQPEAADTDGHSARL 238 Query: 239 LLRHSQILLQHPTPDIAYS-QRLLELAALSQCEEAQYRLGMLHARINHDCERVFPDYGQA 297 LLR Q+L + A Q + E+AA + EA + LG+ HAR++ + +R G Sbjct: 239 LLRCGQLLFKEQGDSAAEEIQSMWEMAARYKNAEAAFLLGLWHARMDENGKRTLFGAGPT 298 Query: 298 NYLAAVPWLNVAGERGLAEAWHALSMIFSKAEYYQRNLPLARQHLKRSAEMGFAVAQFEY 357 ++ A+ WL AG +GL +AW+ALS+I+ KAE+ QRNL A+++L+ +A +G AQ+E Sbjct: 299 SFKKAIHWLTQAGGQGLPKAWYALSLIYQKAEFSQRNLSAAQRYLETAANLGHPRAQYER 358 Query: 358 AQYLWRTRRDDPMYDIRALFWWKKSTDQGHRKAQLVSTAFSSEASGETFATEIAKALTPR 417 + WR RRD+ D++A++W +K+T G +A + + +A +A + + LT Sbjct: 359 GLHAWRNRRDNESNDVQAVYWLQKATGNGQTEAATLLDRIAVKAQPALWAVKALQHLTRE 418 Query: 418 LRAAYPFLSARLDLAAAFNLSKAEALLIDVRRADYGHCLEVDISSYHGRSKRRLILVESD 477 +++PFL+ARL+LAA F LS+ EALL+D+ AD GHCL VDI ++ RSKRRLIL+++ Sbjct: 419 TVSSHPFLAARLELAAVFGLSRPEALLLDIHSADKGHCLLVDIREFYRRSKRRLILIQTG 478 Query: 478 KQRISLNLISRLFTDVDASFEGPEGNYRQRQYRLKTVL 515 K+R +++ I RLF VD +GPEGNYRQRQYRLKT+L Sbjct: 479 KERQTVSRIGRLFEKVDCGLKGPEGNYRQRQYRLKTLL 516