BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3238.p (414 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_03399919.1| heavy metal RND efflux outer membrane protein... 361 1e-97 ref|YP_001633189.1| hypothetical protein Bpet4571 [Bordetella pe... 354 1e-95 ref|ZP_06692658.1| conserved hypothetical protein [Acinetobacter... 354 2e-95 ref|ZP_04661412.1| CzcC family heavy metal RND efflux outer memb... 350 2e-94 ref|ZP_05618667.1| heavy metal RND efflux outer membrane protein... 350 2e-94 >ref|ZP_03399919.1| heavy metal RND efflux outer membrane protein, CzcC family [Pseudomonas syringae pv. tomato T1] ref|ZP_07230937.1| CzcC family heavy metal RND efflux outer membrane protein [Pseudomonas syringae pv. tomato Max13] gb|EEB57023.1| heavy metal RND efflux outer membrane protein, CzcC family [Pseudomonas syringae pv. tomato T1] Length = 418 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 202/392 (51%), Positives = 290/392 (73%) Query: 23 AAPLSFSAALDIAERQSPNLASTRAQIAAAQSSVIPAGALPDPKIFAGIDNYPVSGPDAG 82 AA L+ AL +AE +P+L + A+I AA S+ IPAG LPDPK+ G+ NYP+ GPD Sbjct: 27 AAALTLDEALRLAENNAPSLTAQDAKIQAASSAAIPAGELPDPKLLVGVQNYPIGGPDRW 86 Query: 83 RLNAESMTMQKIGVMQDFPNAAKRQARVAVAEASIETAEAQRQVERLKLRRATALAWLNR 142 ++ + MTMQ +GV Q+ P++ KR+AR+ VA+A+I+ A A+R+VERLK+R++TALAW++ Sbjct: 87 SIDQDFMTMQMVGVRQEMPSSDKRKARIEVADAAIDRASAERRVERLKVRQSTALAWISS 146 Query: 143 YFLERKISLFDDLDKENLLLADAVRAQIASGRTQVADSVMPKQEAAQLADRRDELIRDLV 202 Y +ERK LF D KEN LL+D VRAQIA GR Q AD+V PKQEAAQLA+++D+LI Sbjct: 147 YSVERKDVLFQDFYKENRLLSDTVRAQIAGGRAQPADAVTPKQEAAQLAEQQDDLILQRA 206 Query: 203 KAKSGLRRYVGGEADEPLVDALPEWHIDADHLRNHLHKHPELEAFSAESHKAEAELRQAQ 262 +A++ L+R++G A++ V +LPEW +D + L HPEL AF+ + +A+A++R+A+ Sbjct: 207 QARAALKRWIGSAANDKPVGSLPEWPVDTSSYSHKLQHHPELAAFAPMTREAQAKVREAE 266 Query: 263 AMKKSDWGVELAYQRRDPRFGNMVSVQFTFEIPVSPATRQDPLIAAKQQELYRIDADREA 322 A K+SDW EL YQ RD +FG+MVSVQ ++++P+ P +RQ+P IAAKQ EL +++A+REA Sbjct: 267 AEKQSDWSWELDYQHRDRQFGDMVSVQLSWDLPLFPDSRQNPRIAAKQAELNQLEAEREA 326 Query: 323 MLRAHTNELESDLADYQSLSRQLERANQTALPLAQQKNDLQYASYRAGKSDLTTVLAARR 382 + R HT +LE++LADY+ L R + R + +PLA++K +L ASYRAGK DL V+AARR Sbjct: 327 LSREHTQQLENELADYERLDRAVRRNQDSLVPLAKEKVELSMASYRAGKGDLNAVVAARR 386 Query: 383 EVVDQRLKIIDLEAQRSAVAAQLYFAYGEDQQ 414 E+++ RLK ID+E QR+ +A+LYFAYGE Q Sbjct: 387 ELIEARLKQIDVEEQRALTSARLYFAYGESSQ 418 >ref|YP_001633189.1| hypothetical protein Bpet4571 [Bordetella petrii DSM 12804] emb|CAP44922.1| conserved hypothetical protein [Bordetella petrii] Length = 413 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 198/404 (49%), Positives = 280/404 (69%) Query: 11 LAVLAGMSGNAHAAPLSFSAALDIAERQSPNLASTRAQIAAAQSSVIPAGALPDPKIFAG 70 L +L G AHAAPLSF A+ +A+++SP L + A+I AAQ SVIPAG PDPKI G Sbjct: 10 LPLLVGWVAVAHAAPLSFEQAISLAQQESPALRADTAEIRAAQLSVIPAGEQPDPKIALG 69 Query: 71 IDNYPVSGPDAGRLNAESMTMQKIGVMQDFPNAAKRQARVAVAEASIETAEAQRQVERLK 130 IDNYPVSG +N ESMTMQK+ +MQDF N+ KR+AR A A++ A+AQR+V L Sbjct: 70 IDNYPVSGMGRWTMNGESMTMQKVSIMQDFINSDKREARKDGARAAVGVAQAQRRVALLD 129 Query: 131 LRRATALAWLNRYFLERKISLFDDLDKENLLLADAVRAQIASGRTQVADSVMPKQEAAQL 190 +RRA A W+ RY+LERK+ + +++ ++N + AQ+ + R ++++ P+ AA + Sbjct: 130 IRRAVAQGWITRYYLERKVEVLNNIHRDNRIAVTTAGAQVTADRLSPSNALEPRIAAADI 189 Query: 191 ADRRDELIRDLVKAKSGLRRYVGGEADEPLVDALPEWHIDADHLRNHLHKHPELEAFSAE 250 D +D+L RD+ K+K+ LR+Y+G ADEPL+ A P ++ LR L +HP +++ A+ Sbjct: 190 EDLKDQLTRDISKSKANLRQYIGSAADEPLIGAPPPMEVEIGALREGLDRHPLWDSYDAQ 249 Query: 251 SHKAEAELRQAQAMKKSDWGVELAYQRRDPRFGNMVSVQFTFEIPVSPATRQDPLIAAKQ 310 + A A +R+A A KK DWGVEL +QRRDP+FGNMVS+QFT+E+P+ +TRQ P AK+ Sbjct: 250 ARSASAAIREADAEKKPDWGVELGFQRRDPQFGNMVSLQFTWELPIFSSTRQGPRADAKR 309 Query: 311 QELYRIDADREAMLRAHTNELESDLADYQSLSRQLERANQTALPLAQQKNDLQYASYRAG 370 Q+L R++A+RE R ++ LES +DY++ SR R T LPLA+ DLQYASYRAG Sbjct: 310 QDLIRVNAERETARRERSSALESTFSDYEAASRLGHRLATTTLPLARSSVDLQYASYRAG 369 Query: 371 KSDLTTVLAARREVVDQRLKIIDLEAQRSAVAAQLYFAYGEDQQ 414 KS L VLA RR ++DQ+LK+IDL+ Q++ +AA+LYF+YGE Q Sbjct: 370 KSSLKQVLAVRRLLLDQQLKLIDLQWQQAMLAAELYFSYGELAQ 413 >ref|ZP_06692658.1| conserved hypothetical protein [Acinetobacter sp. SH024] ref|ZP_08435633.1| outer membrane efflux protein [Acinetobacter baumannii 6013150] ref|ZP_08437417.1| outer membrane efflux protein [Acinetobacter baumannii 6013113] gb|EFF85953.1| conserved hypothetical protein [Acinetobacter sp. SH024] gb|EGJ59118.1| outer membrane efflux protein [Acinetobacter baumannii 6013150] gb|EGJ65308.1| outer membrane efflux protein [Acinetobacter baumannii 6013113] Length = 434 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 197/399 (49%), Positives = 277/399 (69%), Gaps = 6/399 (1%) Query: 19 GNAHAAPLSFSAALDIAERQSPNLASTRAQIAAAQSSVIPAGALPDPKIFAGIDNYPVSG 78 G A+A PL+ + A+ +AE+ +P L + A+I A++ V +G LP+PK+F G+DNYPVSG Sbjct: 26 GQAYAEPLTLNTAMKLAEQYAPTLRANSARIEGAENMVSASGILPNPKLFVGLDNYPVSG 85 Query: 79 PDAGRLNAESMTMQKIGVMQDFPNAAKRQARVAVAEASIETAEAQRQVERLKLRRATALA 138 A + E MTMQKIGVMQDFPN AKRQA V +A+A + +A AQ ++ R+++R+ A A Sbjct: 86 DAAWSVTREGMTMQKIGVMQDFPNRAKRQAEVDLAKAELGSANAQTEILRIEVRQKVASA 145 Query: 139 WLNRYFLERKISLFDDLDKENLLLADAVRAQIASGRTQVADSVMPKQEAAQLADRRDELI 198 WL R++LERK++L+D+L EN LL+ + Q+ SGRT +AD++ P+QEA L D++D+L+ Sbjct: 146 WLKRFYLERKLALYDELFSENRLLSQITQTQVISGRTIIADALDPRQEATVLLDQKDDLL 205 Query: 199 RDLVKAKSGLRRYVGGEAD------EPLVDALPEWHIDADHLRNHLHKHPELEAFSAESH 252 RDL KAK L R V E E L D P ++D L +HLH+HPEL+AF AE Sbjct: 206 RDLNKAKLELHRLVSAEPTENLSQIETLPDQAPSIYLDTSKLYHHLHQHPELKAFQAEKQ 265 Query: 253 KAEAELRQAQAMKKSDWGVELAYQRRDPRFGNMVSVQFTFEIPVSPATRQDPLIAAKQQE 312 AEA+L+QAQA++K DWG+ELAYQ R P FG+M+ VQ T E+PV R PLI A E Sbjct: 266 TAEAKLKQAQALQKPDWGIELAYQHRAPEFGDMIGVQLTTELPVFSKRRSSPLIQAALAE 325 Query: 313 LYRIDADREAMLRAHTNELESDLADYQSLSRQLERANQTALPLAQQKNDLQYASYRAGKS 372 RI AD+E R H L+ L+D +L +Q+ RA QT++PLA+QK LQ ASY+AGKS Sbjct: 326 QNRITADQEVQYRDHLTMLDDGLSDLDALDQQIRRAMQTSIPLAKQKVGLQLASYQAGKS 385 Query: 373 DLTTVLAARREVVDQRLKIIDLEAQRSAVAAQLYFAYGE 411 +L+ V+AAR+ +++QRL++IDL+ Q++ AQLY+A+ E Sbjct: 386 NLSNVIAARQALLEQRLRLIDLQQQQAVTKAQLYYAFEE 424 >ref|ZP_04661412.1| CzcC family heavy metal RND efflux outer membrane protein [Acinetobacter baumannii AB900] Length = 434 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 194/399 (48%), Positives = 273/399 (68%), Gaps = 6/399 (1%) Query: 19 GNAHAAPLSFSAALDIAERQSPNLASTRAQIAAAQSSVIPAGALPDPKIFAGIDNYPVSG 78 G +A P++ AL +AE+ +P L + A+I + + +G LP+PK+F G++NYPVSG Sbjct: 26 GQVYAQPMTLDTALKLAEQYAPTLRANSARIEGVKDMISASGILPNPKLFVGLENYPVSG 85 Query: 79 PDAGRLNAESMTMQKIGVMQDFPNAAKRQARVAVAEASIETAEAQRQVERLKLRRATALA 138 A + + MTMQKIGVMQDFPN AKRQA V +A+A + +A AQ ++ R++LR+ A A Sbjct: 86 DAAWSVTQDGMTMQKIGVMQDFPNRAKRQADVELAKAELGSANAQTEILRIELRQKVATA 145 Query: 139 WLNRYFLERKISLFDDLDKENLLLADAVRAQIASGRTQVADSVMPKQEAAQLADRRDELI 198 WL R++LERK++LFD+L EN LL+ + Q+ SGRT +AD + P+QEA L D++D+L+ Sbjct: 146 WLKRFYLERKLALFDELFSENRLLSQITQTQVTSGRTMIADGLGPRQEATVLLDQKDDLL 205 Query: 199 RDLVKAKSGLRRYVGGEAD------EPLVDALPEWHIDADHLRNHLHKHPELEAFSAESH 252 RDL KAK L R V E E L D P H+D L +HLH+HPEL+AF AE Sbjct: 206 RDLNKAKLELHRLVSVEPTGNPSQIETLPDQAPSIHLDTSKLYHHLHQHPELKAFQAEKQ 265 Query: 253 KAEAELRQAQAMKKSDWGVELAYQRRDPRFGNMVSVQFTFEIPVSPATRQDPLIAAKQQE 312 AEA+L+QAQA++K DWG+ELAYQ R P FG+M+ VQ T E+PV R PLI A E Sbjct: 266 TAEAKLKQAQALQKPDWGIELAYQHRAPEFGDMIGVQLTTELPVFSKKRSGPLIQAALDE 325 Query: 313 LYRIDADREAMLRAHTNELESDLADYQSLSRQLERANQTALPLAQQKNDLQYASYRAGKS 372 RI AD+EA R H +L+ L+D +L +Q++R QT++PLA+QK LQ ASY+AGKS Sbjct: 326 QNRITADQEAQYREHLTKLDDGLSDLDALGQQIKRTIQTSIPLAKQKVGLQLASYQAGKS 385 Query: 373 DLTTVLAARREVVDQRLKIIDLEAQRSAVAAQLYFAYGE 411 +L+ V+ AR+ +++Q+L++IDL+ Q++ AQLYFA+ E Sbjct: 386 NLSNVITARQALLEQQLRLIDLQQQQAITTAQLYFAFEE 424 >ref|ZP_05618667.1| heavy metal RND efflux outer membrane protein, CzcC family [Enhydrobacter aerosaccus SK60] gb|EEV24185.1| heavy metal RND efflux outer membrane protein, CzcC family [Enhydrobacter aerosaccus SK60] Length = 434 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 192/399 (48%), Positives = 271/399 (67%), Gaps = 6/399 (1%) Query: 19 GNAHAAPLSFSAALDIAERQSPNLASTRAQIAAAQSSVIPAGALPDPKIFAGIDNYPVSG 78 G +A PL+ AL +AE+ +P L AQI A++ V+ +G LP+PK+F G++NYP+SG Sbjct: 26 GQVYAQPLTLDTALKLAEQYAPTLRVNSAQIEGAENVVLASGILPNPKLFVGLENYPISG 85 Query: 79 PDAGRLNAESMTMQKIGVMQDFPNAAKRQARVAVAEASIETAEAQRQVERLKLRRATALA 138 + + + MTMQKIGVMQDFPN AKRQA V +A+A + + AQ ++ R++LR+ A A Sbjct: 86 DASWSVTQDGMTMQKIGVMQDFPNRAKRQAEVELAKAELGSVTAQTEILRIELRQKVASA 145 Query: 139 WLNRYFLERKISLFDDLDKENLLLADAVRAQIASGRTQVADSVMPKQEAAQLADRRDELI 198 W R++LERK++L+D+L EN LL+ + Q+ SGRT VAD++ PKQEA L D++D+L+ Sbjct: 146 WFKRFYLERKLALYDELFSENRLLSQMTQTQVTSGRTMVADALDPKQEATVLLDQKDDLL 205 Query: 199 RDLVKAKSGLRRYVGGEADEPLV------DALPEWHIDADHLRNHLHKHPELEAFSAESH 252 RDL KAK L R + E E L D P H+D+ L +HLH+HPEL+AF AE Sbjct: 206 RDLNKAKLELHRLISAEPTENLTQIETLPDQAPSIHLDSSKLYHHLHQHPELKAFQAEKK 265 Query: 253 KAEAELRQAQAMKKSDWGVELAYQRRDPRFGNMVSVQFTFEIPVSPATRQDPLIAAKQQE 312 AEA+L+QAQA++K DWG+ELAYQ R FG+M+ VQ T E+PV R PL+ A E Sbjct: 266 TAEAKLKQAQALQKPDWGIELAYQHRAREFGDMIGVQLTTELPVFSKRRSGPLVQAALAE 325 Query: 313 LYRIDADREAMLRAHTNELESDLADYQSLSRQLERANQTALPLAQQKNDLQYASYRAGKS 372 RI AD+E R H L+ L+D +L +Q+ RA Q ++PLA+QK LQ ASY+AGKS Sbjct: 326 QNRIIADQEVQYREHLTMLDDGLSDLDALDQQIRRAMQISIPLAKQKVGLQLASYQAGKS 385 Query: 373 DLTTVLAARREVVDQRLKIIDLEAQRSAVAAQLYFAYGE 411 +L+ V+ AR+ +++QRL++IDL+ Q++ AQLYFA+ E Sbjct: 386 NLSDVITARQSLLEQRLRLIDLQQQQAVTKAQLYFAFEE 424