BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3225.p (622 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002980163.1| IucA/IucC family protein [Ralstonia picketti... 419 e-115 ref|YP_001897769.1| IucA/IucC family protein [Ralstonia picketti... 417 e-114 ref|ZP_07674771.1| IucA/IucC family siderophore biosynthesis pro... 416 e-114 gb|EFV84640.1| hypothetical protein HMPREF0005_03925 [Achromobac... 394 e-107 ref|YP_004557953.1| IucA/IucC family protein [Sinorhizobium meli... 338 1e-90 >ref|YP_002980163.1| IucA/IucC family protein [Ralstonia pickettii 12D] gb|ACS61491.1| IucA/IucC family protein [Ralstonia pickettii 12D] Length = 655 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 262/617 (42%), Positives = 354/617 (57%), Gaps = 25/617 (4%) Query: 17 HLNRAWHQARQRSLQRTLQALFREKLLQREHLIFD--GHYAWLPLWKAQSMLRIEGLHLG 74 H + A AR+R L R LQALFRE LL + LI D LP+W+ + +LR GL G Sbjct: 40 HWSTAQQLARRRVLSRLLQALFREALLSADQLIADTRADVTLLPIWQQRVLLRFTGLRPG 99 Query: 75 VADNCQLHGSIAHYSVGNPV-----PQALLNSSMLLAKVARAHEDISEASLQRLIMELSN 129 + L G +A + G P P ALL+ + + A E A++ RL EL N Sbjct: 100 ALGSWTLTGDVAVLAHGRPPTPIERPSALLHWLAPMLDMGDAAEAHRLAAIGRLAAELDN 159 Query: 130 SAENDALCLNYRQHWGLRLRAEFGQQQ-TNFVASLFRSAHPNPSLLLEQWGTLGHPWHPN 188 S +ND LC YR WG RL AE + +A L P EQWGT GHPWHP Sbjct: 160 SQDNDTLCQAYRLAWGARLAAEHRTAAWQDALALLCGDGTPLALARTEQWGTGGHPWHPA 219 Query: 189 YKTKLGLSSAEVMALSPEFEATITLSLAAMHVDVACITAGQDHAEYRQWFATHYPQAWET 248 YKT+LGL+ +V+ALSPEFEA + + + A+ +T+ Y WFA +P+ Sbjct: 220 YKTRLGLAPDQVIALSPEFEAQVPIGVVAVAAHRLQVTSMDGVQPYANWFAATFPETMAA 279 Query: 249 WTTALQHRGEDVSHWLPLPLHPYQLDRAIPERFAQAVEKRQLLLLPEASLPARPTMSFRT 308 + AL R WLPLP+HP+Q D + E FA +L+ LP+ ++ ARPTMSFRT Sbjct: 280 FRKALLARQLAPEAWLPLPVHPWQRDTTLGETFAAEFAAGELIRLPDINIAARPTMSFRT 339 Query: 309 VVPEGSPTQPHMKLPVSLRLTSVERTVSPKSAVMGPRLTRLLRDIIAKEDGFGGRLAILG 368 V +P P +KLPVS+RLTSVERTVSPKSAVMGPR++ LL I+A + L+I+ Sbjct: 340 VAATDAPGGPMLKLPVSMRLTSVERTVSPKSAVMGPRVSALLERILANDAALASVLSIVP 399 Query: 369 EEVGLYYRDPQGNDDVSRHLAVLYRSNPMTQRCKERMPVPVGALF-----ADSPLSGRPL 423 E G++ +DD +RHL+++ R NP + +PVGALF AD + PL Sbjct: 400 ERHGIHL--ACTDDDRARHLSMIVRDNPTARIAGNERLLPVGALFTPDFTADMTHAAAPL 457 Query: 424 VCDLVSA--AWGDDADAAEQFFAAYLDVALPAVLGAYLRYGIAFEAHQQNSFVMVDAQLR 481 + D V A A G A+ A +FF AYL VA+PA++G YLRYGIA EAHQQN+FV++DA Sbjct: 458 LLDTVLARQADGTRAERAARFFDAYLHVAIPAIVGLYLRYGIALEAHQQNTFVVIDAAGM 517 Query: 482 PVQMLLRDFGDLRIHAPTLRHSRLALETYSSKHTLFEDNDSVRDKFLHAFMLCHIIELAL 541 PV++++RDFGD++I PTLR ++ + + HT + D D R K +HAF+LCHI ELAL Sbjct: 518 PVRLVVRDFGDVKIALPTLRGQGFSITPFRAGHTTYPDRDIPRKKLIHAFLLCHIGELAL 577 Query: 542 LLSRTYQQPEAAFMAVLRE---RLEASFAELRPDTEPQRWQTEYRALLQDDWPAKSFLRM 598 L PE LR+ ++A F R + W+ E ALL+ W K+F+RM Sbjct: 578 ALF-----PERGSAVGLRQWHDAMQAVFEANRSALDADTWKQERHALLEAPWSFKTFVRM 632 Query: 599 RLSDTSEDVVLRMPNPL 615 RL + S+D+ +PNPL Sbjct: 633 RLREQSDDMHAALPNPL 649 >ref|YP_001897769.1| IucA/IucC family protein [Ralstonia pickettii 12J] gb|ACD25337.1| IucA/IucC family protein [Ralstonia pickettii 12J] Length = 655 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 264/620 (42%), Positives = 354/620 (57%), Gaps = 25/620 (4%) Query: 14 QDVHLNRAWHQARQRSLQRTLQALFREKLLQREHLIFD--GHYAWLPLWKAQSMLRIEGL 71 Q H + A AR R L R LQALFRE LL + LI D LP+W+ + +LR GL Sbjct: 37 QTEHWSAAQQLARCRVLSRLLQALFREALLSADRLIADTRADVTLLPIWQQRVLLRFTGL 96 Query: 72 HLGVADNCQLHGSIA---HYSVGNPV--PQALLNSSMLLAKVARAHEDISEASLQRLIME 126 G + L G +A H P+ P ALL+ + + A E A++ RL E Sbjct: 97 RPGALGSWTLTGDVAVLAHDRPPTPIERPSALLHWLAPMLDMGDAAEAHRLAAIDRLAAE 156 Query: 127 LSNSAENDALCLNYRQHWGLRLRAEFGQQQ-TNFVASLFRSAHPNPSLLLEQWGTLGHPW 185 L NS +ND LC YR WG RL AE + +A L P+ EQWGT GHPW Sbjct: 157 LDNSQDNDTLCQAYRLAWGARLAAEHRTAAWQDALALLCGDGTPHALARTEQWGTGGHPW 216 Query: 186 HPNYKTKLGLSSAEVMALSPEFEATITLSLAAMHVDVACITAGQDHAEYRQWFATHYPQA 245 HP YKT+LGL+ +V+ALSPEFEA + L + A+ +T Y WFA +PQ Sbjct: 217 HPAYKTRLGLAPDQVIALSPEFEAQVPLGVVAVAAHRLQVTTMDGVQPYANWFAAAFPQT 276 Query: 246 WETWTTALQHRGEDVSHWLPLPLHPYQLDRAIPERFAQAVEKRQLLLLPEASLPARPTMS 305 + AL R WLPLP+HP+Q D + E FA +L+ LP+ ++ ARPTMS Sbjct: 277 MAAFRKALLARQLAPEAWLPLPVHPWQRDTTLGETFAAEFAAGELIRLPDINIAARPTMS 336 Query: 306 FRTVVPEGSPTQPHMKLPVSLRLTSVERTVSPKSAVMGPRLTRLLRDIIAKEDGFGGRLA 365 FRTV +P +KLPVS+RLTSVERTVSPKSAVMGPR++ LL I+A + L+ Sbjct: 337 FRTVAATDAPGGAMLKLPVSMRLTSVERTVSPKSAVMGPRVSALLERILANDAALASVLS 396 Query: 366 ILGEEVGLYYRDPQGNDDVSRHLAVLYRSNPMTQRCKERMPVPVGALF-----ADSPLSG 420 I+ E G++ +D+ +RHL+++ R NP T+ +PVGALF AD + Sbjct: 397 IVPERHGIHLAGT--DDERARHLSMIVRDNPTTRIAGNARLLPVGALFTPDFTADMTHAA 454 Query: 421 RPLVCDLVSA--AWGDDADAAEQFFAAYLDVALPAVLGAYLRYGIAFEAHQQNSFVMVDA 478 PL+ D V A A G A+ A +FF AYL VA+PA++G YLRYGIA EAHQQN+FV++D Sbjct: 455 APLLLDTVLARQADGTRAERAARFFDAYLHVAIPAIVGLYLRYGIALEAHQQNTFVVIDE 514 Query: 479 QLRPVQMLLRDFGDLRIHAPTLRHSRLALETYSSKHTLFEDNDSVRDKFLHAFMLCHIIE 538 PV++++RDFGD++I PTL+ ++E + + HT + D D R K +HAF+LCHI E Sbjct: 515 AGMPVRLVVRDFGDVKIALPTLQAQGFSIEPFRAGHTTYPDRDIPRKKLIHAFLLCHIGE 574 Query: 539 LALLLSRTYQQPEAAFMAVLRE---RLEASFAELRPDTEPQRWQTEYRALLQDDWPAKSF 595 LAL L PE LR+ ++A F R + W+ E ALL+ W K+F Sbjct: 575 LALALF-----PEHGSAVGLRQWHDAMQAVFEANRTALDADTWKQERHALLEAPWSFKTF 629 Query: 596 LRMRLSDTSEDVVLRMPNPL 615 +RMRL D S+D+ +PNPL Sbjct: 630 VRMRLRDQSDDMHAALPNPL 649 >ref|ZP_07674771.1| IucA/IucC family siderophore biosynthesis protein [Ralstonia sp. 5_7_47FAA] gb|EFP66832.1| IucA/IucC family siderophore biosynthesis protein [Ralstonia sp. 5_7_47FAA] Length = 625 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 264/620 (42%), Positives = 354/620 (57%), Gaps = 25/620 (4%) Query: 14 QDVHLNRAWHQARQRSLQRTLQALFREKLLQREHLIFD--GHYAWLPLWKAQSMLRIEGL 71 Q H + A AR R L R LQALFRE LL + LI D LP+W+ + +LR GL Sbjct: 7 QTEHWSAAQQLARCRVLSRLLQALFREALLSADRLIADTRADVTLLPIWQQRVLLRFTGL 66 Query: 72 HLGVADNCQLHGSIA---HYSVGNPV--PQALLNSSMLLAKVARAHEDISEASLQRLIME 126 G + L G +A H P+ P ALL+ + + A E A++ RL E Sbjct: 67 RPGALGSWTLTGDVAVLAHDRPPTPIERPSALLHWLAPMLDMGDAAEAHRLAAIDRLAAE 126 Query: 127 LSNSAENDALCLNYRQHWGLRLRAEFGQQQ-TNFVASLFRSAHPNPSLLLEQWGTLGHPW 185 L NS +ND LC YR WG RL AE + +A L P+ EQWGT GHPW Sbjct: 127 LDNSQDNDTLCQAYRLAWGARLAAEHRTAAWQDALALLCGDGTPHALARTEQWGTGGHPW 186 Query: 186 HPNYKTKLGLSSAEVMALSPEFEATITLSLAAMHVDVACITAGQDHAEYRQWFATHYPQA 245 HP YKT+LGL+ +V+ALSPEFEA + L + A+ +T Y WFA +PQ Sbjct: 187 HPAYKTRLGLAPDQVIALSPEFEAQVPLGVVAVAAHRLQVTTMDGVQPYANWFAAAFPQT 246 Query: 246 WETWTTALQHRGEDVSHWLPLPLHPYQLDRAIPERFAQAVEKRQLLLLPEASLPARPTMS 305 + AL R WLPLP+HP+Q D + E FA +L+ LP+ ++ ARPTMS Sbjct: 247 MAAFRKALLARQLAPEAWLPLPVHPWQRDTTLGETFAAEFAAGELIRLPDINIAARPTMS 306 Query: 306 FRTVVPEGSPTQPHMKLPVSLRLTSVERTVSPKSAVMGPRLTRLLRDIIAKEDGFGGRLA 365 FRTV +P +KLPVS+RLTSVERTVSPKSAVMGPR++ LL I+A + L+ Sbjct: 307 FRTVAATDAPGGAMLKLPVSMRLTSVERTVSPKSAVMGPRVSALLERILANDAALASVLS 366 Query: 366 ILGEEVGLYYRDPQGNDDVSRHLAVLYRSNPMTQRCKERMPVPVGALF-----ADSPLSG 420 I+ E G++ +D+ +RHL+++ R NP T+ +PVGALF AD + Sbjct: 367 IVPERHGIHLAGT--DDERARHLSMIVRDNPTTRIAGNARLLPVGALFTPDFTADMTHAA 424 Query: 421 RPLVCDLVSA--AWGDDADAAEQFFAAYLDVALPAVLGAYLRYGIAFEAHQQNSFVMVDA 478 PL+ D V A A G A+ A +FF AYL VA+PA++G YLRYGIA EAHQQN+FV++D Sbjct: 425 APLLLDTVLARQADGTRAERAARFFDAYLHVAIPAIVGLYLRYGIALEAHQQNTFVVIDE 484 Query: 479 QLRPVQMLLRDFGDLRIHAPTLRHSRLALETYSSKHTLFEDNDSVRDKFLHAFMLCHIIE 538 PV++++RDFGD++I PTL+ ++E + + HT + D D R K +HAF+LCHI E Sbjct: 485 AGMPVRLVVRDFGDVKIALPTLQAQGFSIEPFRAGHTTYPDRDIPRKKLIHAFLLCHIGE 544 Query: 539 LALLLSRTYQQPEAAFMAVLRE---RLEASFAELRPDTEPQRWQTEYRALLQDDWPAKSF 595 LAL L PE LR+ ++A F R + W+ E ALL+ W K+F Sbjct: 545 LALALF-----PEHGSAVGLRQWHDAMQAVFEANRTALDADTWKQERHALLEAPWSFKTF 599 Query: 596 LRMRLSDTSEDVVLRMPNPL 615 +RMRL D S+D+ +PNPL Sbjct: 600 VRMRLRDQSDDMHAALPNPL 619 >gb|EFV84640.1| hypothetical protein HMPREF0005_03925 [Achromobacter xylosoxidans C54] Length = 592 Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats. Identities = 242/588 (41%), Positives = 341/588 (57%), Gaps = 9/588 (1%) Query: 34 LQALFREKLLQREHLIFDGHYAWLPLWKAQSMLRIEGLHLGVADNCQLHGSIAHYSVGNP 93 +QAL REKL+ + + LPL + L L G + L G + + NP Sbjct: 1 MQALLREKLIAPGRIQQAHGRSILPLGDEGAYLTFGSLRPGPMASWYLGGPVLLHRSPNP 60 Query: 94 VPQALLNSSMLLAKVARAHEDISEASLQRLIMELSNSAENDALCLNYRQHWGLRLRAEFG 153 + L S ++ V +++L EL +S ND+LCL + +W RL + Sbjct: 61 AYELELPSDLIEQLVPLLEPIPGADEVEQLKRELDDSFRNDSLCLAFHGNWNARLLKQTR 120 Query: 154 QQQTNFVASLFRS--AHPNPSLLLEQWGTLGHPWHPNYKTKLGLSSAEVMALSPEFEATI 211 T+ + RS A NP+ LLEQWGTLGHPWHP YK KLG+ + EV+ +PEFEA + Sbjct: 121 DAHTDSLLQWLRSPDAPRNPTQLLEQWGTLGHPWHPGYKAKLGMDTREVIGCAPEFEAHV 180 Query: 212 TLSLAAMHVDVACITAGQDHAEYRQWFATHYPQAWETWTTALQHRGEDVSHWLPLPLHPY 271 L L A+H +A T Y W+ +P TW +AL+ G + + +LP P+HP+ Sbjct: 181 RLPLVALHRGMAH-TESMSEPAYPTWWRGAFPHEARTWDSALRALGREPADFLPFPVHPF 239 Query: 272 QLDRAIPERFAQAVEKRQLLLLPEASLPARPTMSFRTVVPEGSPTQ--PHMKLPVSLRLT 329 QL + E FA + + QL+L + ++ P MSFRT+ EG+ + P +KLPV+LRLT Sbjct: 240 QLS-TLRETFAAEIAQGQLILPDDTAIAGSPGMSFRTLWTEGADPRHMPMVKLPVALRLT 298 Query: 330 SVERTVSPKSAVMGPRLTRLLRDIIAKEDGFGGRLAILGEEVGLYYRDPQGNDDVSRHLA 389 SV+RT+SP+SA MGPR++RLL I +E + E G++ ND+ +RHL Sbjct: 299 SVQRTLSPRSARMGPRISRLLATIRQREPQLAHSWDFVPERHGIHVLLEPANDERARHLG 358 Query: 390 VLYRSNPMTQRCKERMPVPVGALFADSPLSGRPLVCDLVSAAWG-DDADAAEQFFAAYLD 448 VLYR NP ++ +M +PVG+LF + + PL+ V+ A G D AA++FF Y+ Sbjct: 359 VLYRDNPTSRLHSGQMAIPVGSLFVEDH-NNEPLLRQWVAIAQGASDHQAAQRFFQDYVA 417 Query: 449 VALPAVLGAYLRYGIAFEAHQQNSFVMVDAQLRPVQMLLRDFGDLRIHAPTLRHSRLALE 508 ALP +L YL YGIAFEAHQQNSF+++D +P ++L+RDFGDLRIH P+L L LE Sbjct: 418 TALPGLLDLYLVYGIAFEAHQQNSFMVMDDAGQPSRLLIRDFGDLRIHRPSLVRQGLTLE 477 Query: 509 TYSSKHTLFEDNDSVRDKFLHAFMLCHIIELALLLSRTYQQ-PEAAFMAVLRERLEASFA 567 + TLF+D D VR K LHA +CH+ ELALL R + + E A + L ++ F Sbjct: 478 IHDPALTLFDDADFVRAKLLHAGFMCHLGELALLCQRHWPELDEQALWSALARQVAERFD 537 Query: 568 ELRPDTEPQRWQTEYRALLQDDWPAKSFLRMRLSDTSEDVVLRMPNPL 615 +RP TEP+RWQ+E A L++ WPAKSFLRMRL+ T D+ +M NPL Sbjct: 538 HVRPRTEPERWQSERAAFLENPWPAKSFLRMRLAQTQNDITGQMDNPL 585 >ref|YP_004557953.1| IucA/IucC family protein [Sinorhizobium meliloti AK83] gb|AEG58209.1| IucA/IucC family protein [Sinorhizobium meliloti AK83] Length = 629 Score = 338 bits (868), Expect = 1e-90, Method: Composition-based stats. Identities = 218/606 (35%), Positives = 329/606 (54%), Gaps = 19/606 (3%) Query: 25 ARQRSLQRTLQALFREKLLQREHLIF--DGHYAWLPLWKAQSMLRIEGLHLGVADNCQLH 82 A + +++R ++ LF E+LL + LI+ DG A PLW ++ +L LHL A Q Sbjct: 24 ASRNAIKRLVRCLFAERLLDPDALIWALDGRQASFPLWASRRVLHFTDLHLAPAGTLQNR 83 Query: 83 GSIAHYSVGNPVPQALLNSSMLLAKVARAHEDISEA--SLQRLIMELSNSAENDALCLNY 140 G + G Q + + S L+ +VA + I+ A L+ L+ +++NS ND L Sbjct: 84 GQVEVLD-GTGGRQKIDDPSALMREVAPSLA-ITPAPDGLEHLVRDVNNSMGNDILARRA 141 Query: 141 RQHWGLRLRAEFGQQQTNFVASLFRSAHPN--PSLLLEQWGTL-GHPWHPNYKTKLGLSS 197 R+ W LR + + + + P +++L+QWG L GHP++P +K K GL+ Sbjct: 142 RESWSETLRQQIADAGAPGFLAFLQESLPTHLAAMVLDQWGALEGHPFYPTWKAKPGLAP 201 Query: 198 AEVMALSPEFEATITLSLAAMHVDVACITAGQDHAEYRQWFATHYPQAWETWTTALQHRG 257 +V ALSPEF A + L +AA+ D A + Y +WFA ++P+ W W L+ RG Sbjct: 202 EDVAALSPEFGARVPLVIAALRNDWAYVEKMPHVGSYSEWFAGNFPELWHQWAERLKARG 261 Query: 258 EDVSHWLPLPLHPYQLDRAIPERFAQAVEKRQLLLLPEA-SLPARPTMSFRTVVPEGSPT 316 + W+PLP+H + L+ + FA +E +L PE + P+MSFRT++PE Sbjct: 262 KSTEDWIPLPVHGWHLENFVRREFAAEIESG--VLDPEGPEIVTLPSMSFRTMLPETEAP 319 Query: 317 QPHMKLPVSLRLTSVERTVSPKSAVMGPRLTRLLRDIIAKEDGFGGRLAILGEEVGLYYR 376 +P +KLPV++ +TS +RT+ KS MGPRL+ L+ DI++KED L I EE+G Sbjct: 320 RPFVKLPVAIWMTSEQRTLQGKSIHMGPRLSTLISDILSKEDDLKRELEIFTEELGAILH 379 Query: 377 DPQ-GNDDVSRHLAVLYRSNPMTQRCKERMPVPVGALFADSPLSGRPLVCDLVSAAWGDD 435 P+ G++ R L+V+YR+ R +PV V AL SPL GRPL+C+L++ G + Sbjct: 380 HPETGDEHPGRFLSVVYRNADPLTREDGMLPVTVAALLTASPLDGRPLICELIARNGGAN 439 Query: 436 ADAAEQFFAAYLDVALPAVLGAYLRYGIAFEAHQQNSFVMVDAQLRPVQMLLRDFGDLRI 495 A FF AY + L YL YGIAFEAHQQNS ++ D + P ++++RDFGD R Sbjct: 440 EAAIAAFFRAYTRTVVRPALAMYLLYGIAFEAHQQNSTILFDDRGMPRKLMIRDFGDGRS 499 Query: 496 HAPTLRHSRLALETYSSKH---TLFEDNDS-VRDKFLHAFMLCHIIELALLLSRTYQQPE 551 AP + L+ +S K T F+++ S VR + A +CH+ E+AL L++ Y Sbjct: 500 FAPLFKERGYDLKPFSRKGILPTTFDNDISLVRSFVIDACFVCHLHEIALCLTKEYSLVG 559 Query: 552 AAFMAVLRERLEASFAELRPDT-EPQRWQTEYRALLQDDWPAKSFLRMRLSDTSE-DVVL 609 + +LRE EA+F L+P W E A L+ WP +S LRM L + V Sbjct: 560 DSLWCILREETEAAFQALKPRMLSDAFWIEERDAFLERPWPTRSVLRMHLERYRDYRVEH 619 Query: 610 RMPNPL 615 +PNPL Sbjct: 620 HLPNPL 625