BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3199.p (228 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002537677.1| two-component system sensor histidine kinase... 427 e-118 ref|YP_001860685.1| two component transcriptional regulator [Bur... 300 8e-80 ref|YP_001807940.1| two component transcriptional regulator [Bur... 291 5e-77 ref|ZP_08868829.1| two-component response regulator [Azospirillu... 288 4e-76 ref|YP_001114858.1| two component transcriptional regulator [Bur... 288 5e-76 >ref|XP_002537677.1| two-component system sensor histidine kinase/response regulator, putative [Ricinus communis] gb|EEF24706.1| two-component system sensor histidine kinase/response regulator, putative [Ricinus communis] Length = 228 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 220/228 (96%), Positives = 224/228 (98%) Query: 1 MTATKLLIVEDNERVARFLKKGLSESGYEVHHADNGRDGMLMASSTPYEAIIMDRMLPGG 60 MTA KLLIVEDNERVA FLKKGLSESGYEVHHADNGRDGML+A+STPYEAIIMDRMLPGG Sbjct: 1 MTAIKLLIVEDNERVALFLKKGLSESGYEVHHADNGRDGMLLAASTPYEAIIMDRMLPGG 60 Query: 61 IDGLSIIEALRKTGNSVPILILSAMAEVDDRIKGLQSGGDDYLIKPFSFGELLARVEAII 120 IDGLSIIEALRKTGN+VPILILSAMAEVDDRIKGLQSGGDDYLIKPFSFGELLARVEAII Sbjct: 61 IDGLSIIEALRKTGNNVPILILSAMAEVDDRIKGLQSGGDDYLIKPFSFGELLARVEAII 120 Query: 121 RRSRELTERTYLVVGNLHMDIMKHKVYRDGKAIALQPREFHLLEYLMRHANKVVTRTMLL 180 RRSRELTERTYLVVGNLHMDIMKHKVYRDGKAI LQPREFHLLEYLMRHANKVVTRTMLL Sbjct: 121 RRSRELTERTYLVVGNLHMDIMKHKVYRDGKAILLQPREFHLLEYLMRHANKVVTRTMLL 180 Query: 181 ENVWDYDFDPQTNVVDVHISKLRQKLDIESLSPMLKTIRNAGYMLTDE 228 ENVWDYDFDPQTNVVDVHISKLRQKLDI+SL PMLKTIRNAGYMLTDE Sbjct: 181 ENVWDYDFDPQTNVVDVHISKLRQKLDIDSLPPMLKTIRNAGYMLTDE 228 >ref|YP_001860685.1| two component transcriptional regulator [Burkholderia phymatum STM815] gb|ACC73639.1| two component transcriptional regulator, winged helix family [Burkholderia phymatum STM815] Length = 226 Score = 300 bits (769), Expect = 8e-80, Method: Composition-based stats. Identities = 147/222 (66%), Positives = 187/222 (84%) Query: 5 KLLIVEDNERVARFLKKGLSESGYEVHHADNGRDGMLMASSTPYEAIIMDRMLPGGIDGL 64 K+L+VEDN++VA FLKKGL E+G+ V ADNGRDGM +A Y+AI++DRMLPGGIDGL Sbjct: 2 KILLVEDNQQVAGFLKKGLLETGHVVDWADNGRDGMALAIGETYDAIVLDRMLPGGIDGL 61 Query: 65 SIIEALRKTGNSVPILILSAMAEVDDRIKGLQSGGDDYLIKPFSFGELLARVEAIIRRSR 124 SI+ ALR +GN VP+LILSA+ EVD+RI+GL++GGDDY++KPFSFGE++AR+EA+ RRS+ Sbjct: 62 SIVAALRASGNKVPVLILSALDEVDERIRGLKAGGDDYVVKPFSFGEVVARLEALARRSQ 121 Query: 125 ELTERTYLVVGNLHMDIMKHKVYRDGKAIALQPREFHLLEYLMRHANKVVTRTMLLENVW 184 + T L V +L +D++ KV R GKAI L+PREF LLEYLMRHA +VVTRTMLLEN+W Sbjct: 122 DNNFETTLKVADLCIDLLSRKVMRAGKAIVLKPREFKLLEYLMRHAEQVVTRTMLLENIW 181 Query: 185 DYDFDPQTNVVDVHISKLRQKLDIESLSPMLKTIRNAGYMLT 226 +Y+FDPQTNV+DVH+SKLRQK+DI +L+TIRNAGYMLT Sbjct: 182 EYNFDPQTNVIDVHVSKLRQKIDIGFERSLLRTIRNAGYMLT 223 >ref|YP_001807940.1| two component transcriptional regulator [Burkholderia ambifaria MC40-6] gb|ACB63724.1| two component transcriptional regulator, winged helix family [Burkholderia ambifaria MC40-6] Length = 226 Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats. Identities = 144/222 (64%), Positives = 183/222 (82%) Query: 5 KLLIVEDNERVARFLKKGLSESGYEVHHADNGRDGMLMASSTPYEAIIMDRMLPGGIDGL 64 K+L+VEDN++VA FLKKGL E+G+ V ADNGRDGM +A Y+AI++DRMLPGGIDGL Sbjct: 2 KILLVEDNQQVAGFLKKGLLETGHVVDWADNGRDGMALAIGESYDAIVLDRMLPGGIDGL 61 Query: 65 SIIEALRKTGNSVPILILSAMAEVDDRIKGLQSGGDDYLIKPFSFGELLARVEAIIRRSR 124 I+ ALR G+ VP+LILSA+ EVD+RI+GL++GGDDY++KPFSFGE++AR+EA+ RRS+ Sbjct: 62 KIVAALRAAGSKVPVLILSALDEVDERIRGLKAGGDDYVVKPFSFGEVVARLEALARRSQ 121 Query: 125 ELTERTYLVVGNLHMDIMKHKVYRDGKAIALQPREFHLLEYLMRHANKVVTRTMLLENVW 184 + T L VG+L +D++ KV R G AI L+PREF LLEYLMRHA +VVTRTMLLEN+W Sbjct: 122 DNGFDTKLKVGDLCIDLLSRKVARAGNAILLKPREFKLLEYLMRHAEQVVTRTMLLENIW 181 Query: 185 DYDFDPQTNVVDVHISKLRQKLDIESLSPMLKTIRNAGYMLT 226 +Y FDPQTNV+DVH+SKLRQK+D +L+TIRNAGYMLT Sbjct: 182 EYHFDPQTNVIDVHVSKLRQKIDTGFDRSLLRTIRNAGYMLT 223 >ref|ZP_08868829.1| two-component response regulator [Azospirillum amazonense Y2] gb|EGY01577.1| two-component response regulator [Azospirillum amazonense Y2] Length = 227 Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 143/223 (64%), Positives = 179/223 (80%), Gaps = 1/223 (0%) Query: 5 KLLIVEDNERVARFLKKGLSESGYEVHHADNGRDGMLMASSTPYEAIIMDRMLPGGIDGL 64 K+L+VEDNERV+RF+ KGL E+G+ V H DNGRDGM +A+ P++ I+MDRMLPG IDGL Sbjct: 2 KVLLVEDNERVSRFVVKGLREAGHTVEHVDNGRDGMFLATGEPFDVIVMDRMLPGDIDGL 61 Query: 65 SIIEALRKTGNSVPILILSAMAEVDDRIKGLQSGGDDYLIKPFSFGELLARVEAIIRRSR 124 +IIE LRK G P+LILSA++ VD+RIKGL+SGGDDYL KPF+FGELLAR++A++RRS Sbjct: 62 TIIETLRKMGTQTPVLILSALSSVDERIKGLRSGGDDYLTKPFAFGELLARLDALMRRSP 121 Query: 125 E-LTERTYLVVGNLHMDIMKHKVYRDGKAIALQPREFHLLEYLMRHANKVVTRTMLLENV 183 T L VG+L M+++ KV R + I LQ +EF LLEYLMRH ++VVTRTMLLE V Sbjct: 122 TGAVPETSLAVGDLRMNLLSRKVTRGERVITLQNQEFKLLEYLMRHVDQVVTRTMLLEGV 181 Query: 184 WDYDFDPQTNVVDVHISKLRQKLDIESLSPMLKTIRNAGYMLT 226 W Y FDPQTNVVDVHISKLRQK++ E P+L+T+RNAGYM+T Sbjct: 182 WGYHFDPQTNVVDVHISKLRQKIEGEGEPPLLRTVRNAGYMMT 224 >ref|YP_001114858.1| two component transcriptional regulator [Burkholderia vietnamiensis G4] gb|ABO58603.1| two component transcriptional regulator, winged helix family [Burkholderia vietnamiensis G4] Length = 226 Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats. Identities = 142/222 (63%), Positives = 182/222 (81%) Query: 5 KLLIVEDNERVARFLKKGLSESGYEVHHADNGRDGMLMASSTPYEAIIMDRMLPGGIDGL 64 K+L+VEDN++VA FLKKGL E+G+ V ADNGRDGM +A Y+AI++DRMLPGGIDGL Sbjct: 2 KILLVEDNQQVAGFLKKGLLETGHVVDWADNGRDGMALAIGESYDAIVLDRMLPGGIDGL 61 Query: 65 SIIEALRKTGNSVPILILSAMAEVDDRIKGLQSGGDDYLIKPFSFGELLARVEAIIRRSR 124 I+ ALR G+ VP+LILSA+ EVD+RI+GL++GGDDY++KPFSFGE++AR+EA+ RRS+ Sbjct: 62 KIVAALRAAGSKVPVLILSALDEVDERIRGLKAGGDDYVVKPFSFGEVVARLEALARRSQ 121 Query: 125 ELTERTYLVVGNLHMDIMKHKVYRDGKAIALQPREFHLLEYLMRHANKVVTRTMLLENVW 184 + T L + +L +D++ KV R GK I L+PREF LLEYLMRHA +VVTRTMLLEN+W Sbjct: 122 DNGFDTALKLADLSIDLLSRKVTRAGKPIVLKPREFKLLEYLMRHAEQVVTRTMLLENIW 181 Query: 185 DYDFDPQTNVVDVHISKLRQKLDIESLSPMLKTIRNAGYMLT 226 +Y FDPQTNV+DVH+SKLRQK+D +L+TIRNAGYMLT Sbjct: 182 EYHFDPQTNVIDVHVSKLRQKIDTGFDRSLLRTIRNAGYMLT 223