BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3197.p         (110 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003278528.1| hypothetical protein CtCNB1_2486 [Comamonas ...    64   9e-09
ref|YP_285490.1| hypothetical protein Daro_2283 [Dechloromonas a...    61   5e-08
ref|YP_002890928.1| hypothetical protein Tmz1t_3968 [Thauera sp....    59   2e-07
gb|EGW59802.1| hypothetical protein DsuiDRAFT_03158 [Dechlorosom...    57   8e-07
ref|YP_003165239.1| hypothetical protein CAP2UW1_4665 [Candidatu...    57   1e-06

>ref|YP_003278528.1| hypothetical protein CtCNB1_2486 [Comamonas testosteroni CNB-2]
 gb|ACY33232.1| hypothetical protein CtCNB1_2486 [Comamonas testosteroni CNB-2]
          Length = 133

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 1/93 (1%)

Query: 17  SFAGANAIAQVAD-PFGVPANNAMPEREIAMNSSTKYVNVNQGEIVKFVSNGKSFTWKFD 75
           SF   ++  + AD  FG     +   R +    ST+Y+N+  GE V+F +  + F WKFD
Sbjct: 40  SFESTSSTTRTADRTFGRAGAESQVSRVVDTTRSTQYLNLVCGETVEFTNGKEQFIWKFD 99

Query: 76  TFGMRPFSFSKIAPQNFEGGNATVYLGTNPLYR 108
             G RP   SKIAP  F G    +Y+  N L R
Sbjct: 100 VMGHRPVDLSKIAPAAFAGSTLKIYVAKNELER 132


>ref|YP_285490.1| hypothetical protein Daro_2283 [Dechloromonas aromatica RCB]
 gb|AAZ47020.1| hypothetical protein Daro_2283 [Dechloromonas aromatica RCB]
          Length = 129

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 4/80 (5%)

Query: 30  PFGVPANNAMPEREIAMNSSTKYVNVNQGEIVKFVSNGKSFTWKFDTFGMRPFSFSKIAP 89
           P+G  A+     RE+ ++S TKY+NV + E ++    GKS TW FDT G   F  + I P
Sbjct: 54  PYGYAASGT-AAREVIIDSGTKYLNVTRLETIRINVGGKSVTWMFDTLGTASFPLANIIP 112

Query: 90  QNFEGGNATVYLGTNPLYRG 109
                G+ TVY+  NP YRG
Sbjct: 113 G---AGDVTVYVTENPAYRG 129


>ref|YP_002890928.1| hypothetical protein Tmz1t_3968 [Thauera sp. MZ1T]
 gb|ACR02551.1| conserved hypothetical protein [Thauera sp. MZ1T]
          Length = 131

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 5/75 (6%)

Query: 35  ANNAMPEREIAMNSSTKYVNVNQGEIVKFVSNGKSFTWKFDTFGMRPFSFSKIAPQNFEG 94
           A+NA P R + +N+ T+Y+NV + E V      K+  W FDT G   F  SK+     +G
Sbjct: 58  ASNATPSRTVIVNADTRYINVTRLETVALKVGDKTVNWTFDTIGTNSFPLSKV----IQG 113

Query: 95  GN-ATVYLGTNPLYR 108
           G+  TVYL  +PLYR
Sbjct: 114 GDKVTVYLEESPLYR 128


>gb|EGW59802.1| hypothetical protein DsuiDRAFT_03158 [Dechlorosoma suillum PS]
          Length = 130

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 40/104 (38%), Positives = 52/104 (50%), Gaps = 14/104 (13%)

Query: 17  SFAGA-NAIAQVADPFGVPANNAMP----------EREIAMNSSTKYVNVNQGEIVKFVS 65
           S AGA + ++ VA+  G P  N             +REI ++S TK+VNV + E VK   
Sbjct: 29  SEAGAIHWLSHVAESTGSPTANQQAAFGYAATKSADREITVDSGTKHVNVTRLETVKINV 88

Query: 66  NGKSFTWKFDTFGMRPFSFSKIAPQNFEGGNATVYLGTNPLYRG 109
            GK+  W FDT G   F  SKI P        TVY+  NP Y+G
Sbjct: 89  GGKTVVWTFDTLGTAAFPLSKIMPG---ADGITVYVAENPSYQG 129


>ref|YP_003165239.1| hypothetical protein CAP2UW1_4665 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gb|ACV37792.1| hypothetical protein CAP2UW1_4665 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 130

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/80 (42%), Positives = 41/80 (51%), Gaps = 4/80 (5%)

Query: 30  PFGVPANNAMPEREIAMNSSTKYVNVNQGEIVKFVSNGKSFTWKFDTFGMRPFSFSKIAP 89
           PFG  A     +RE+++ S  KY NV + E +K    GKS  W FDT G   F  SKI P
Sbjct: 54  PFGYAATKN-ADREVSLPSGGKYFNVTRLETLKLNVGGKSVVWTFDTLGTAAFPLSKIVP 112

Query: 90  QNFEGGNATVYLGTNPLYRG 109
              E    TVYL  N  Y+G
Sbjct: 113 ---EADGITVYLTENHFYQG 129