BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3191.p (393 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001206247.1| putative acyl-CoA dehydrogenase [Bradyrhizob... 270 3e-70 ref|YP_001526081.1| acyl-CoA dehydrogenase [Azorhizobium caulino... 266 5e-69 ref|YP_320625.1| putative acyl-CoA dehydrogenase [Anabaena varia... 265 1e-68 ref|YP_001418353.1| acyl-CoA dehydrogenase type 2 [Xanthobacter ... 263 4e-68 ref|YP_001239306.1| putative acyl-CoA dehydrogenase [Bradyrhizob... 261 1e-67 >ref|YP_001206247.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278] emb|CAL78022.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278] Length = 409 Score = 270 bits (691), Expect = 3e-70, Method: Composition-based stats. Identities = 163/386 (42%), Positives = 219/386 (56%), Gaps = 2/386 (0%) Query: 8 LLQRIADGAAQRDAQREQPFDVIAEVKATGFGAGRLDADYGGGGATFVETLDTAIQLGAA 67 LL IADG ++R+ +R P IA +K GA RL GG G+T + + I+L A Sbjct: 26 LLAAIADGESERERERILPHQQIALIKQARLGALRLPVAAGGSGSTIRQLFEMVIRLAEA 85 Query: 68 DPNVAHIWRNHHVALERLLNAPLQHAGVQRLRERVRAGDLVGASHTELGQPQIGGNAPLA 127 D NVAHI RNH +ERL+ P + + ++RV AG ++G + TEL PQ+G P Sbjct: 86 DANVAHILRNHFSVVERLVRIP-RDDQARAWQQRVAAGAIIGLATTELDSPQVGNITP-N 143 Query: 128 TRLVRQGDHYVLNGQKFYSTGSLFADWLHVTVSVEDGRRAVVLLPRQREGVQTVDDWFGM 187 T GD Y+LNG K+YSTG+L++D + V + GR +LP R G++ VDDW GM Sbjct: 144 TTFTPDGDDYLLNGTKYYSTGTLYSDLVLVRAADPTGRPGATILPLDRAGIELVDDWDGM 203 Query: 188 GQRLTGSGTTIFENVVVAADEVVLPDQVPARQAVFGSTIAQLFLTSVIAGVVSAVARDGA 247 GQRLT +GTT F NV V E+V + +T AQLFLT+ +AG+ A RD Sbjct: 204 GQRLTATGTTHFRNVRVKRQEIVFDAPDIGYGVPYSNTFAQLFLTAAVAGISRAALRDAI 263 Query: 248 ALLGKRRRNYYYAPTPSAAQDPILLTALGERDADAFATRAVVLAAAVEADRAYAALKANA 307 AL+ R+R +YYAP +DP+L +G+ A A A VVL AA D A A A Sbjct: 264 ALVRSRKRTFYYAPHEKPTEDPLLQQTVGQIAASAHAAETVVLVAAEALDAATEAFDAGR 323 Query: 308 YDADDRLQDAAAAAARAKITVDRIAHHAATALFDIAGASATLAQFNLDRHWRNIRTISTH 367 DA+ AA +A+AKI D A +FD+ GAS+T N DRHWRN RT+S+H Sbjct: 324 DDAEALAHRAALLSAQAKIVADDAAIRNGGLIFDVGGASSTKKATNFDRHWRNARTLSSH 383 Query: 368 NPTSHKAYALGNLSVNQVRLPTQGFF 393 NP ++K A+G +N LP +GFF Sbjct: 384 NPVTYKQRAIGQYLINGTPLPAKGFF 409 >ref|YP_001526081.1| acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571] dbj|BAF89163.1| putative acyl-CoA dehydrogenase [Azorhizobium caulinodans ORS 571] Length = 409 Score = 266 bits (680), Expect = 5e-69, Method: Composition-based stats. Identities = 161/391 (41%), Positives = 238/391 (60%), Gaps = 10/391 (2%) Query: 7 DLLQRIADGAAQRDAQREQPFDVIAEVKATGFGAGRLDADYGGGGATFVETLDTAIQLGA 66 DL IA GAA+RD +R P++V +++ GA RL + GG GA+ E + I L A Sbjct: 25 DLFAFIAAGAAERDRERIHPYEVFDLIRSARLGALRLRPEDGGPGASLRELFEVVIALAA 84 Query: 67 ADPNVAHIWRNHHVALERLLNAPLQHAGVQRLR--ERVRAGDLVGASHTELGQPQIGGNA 124 ADPN+AH RNH+ +ER PL R + + +G +VG + TEL P++G + Sbjct: 85 ADPNIAHSLRNHYAFVERY---PLSRRASHRKKWADVTASGAIVGLASTELTSPRVGA-S 140 Query: 125 PLATRLVRQGDHYVLNGQKFYSTGSLFADWLHVTVSVEDGRRAVVLLPRQREGVQTVDDW 184 P T+LV +G+ + L G K+YSTG+L+AD++ V + D ++P REG++ +DDW Sbjct: 141 PFETKLVPEGNGFRLTGTKYYSTGTLYADYVQVRAAGPDDAVLTAIIPTTREGIERIDDW 200 Query: 185 FGMGQRLTGSGTTIFENVVVAADEVVLPDQVPARQAV-FGSTIAQLFLTSVIAGVVSAVA 243 G GQRLTGSGTT F NV V ADE+ PD + V +++AQL +T+ +AG++ + Sbjct: 201 DGAGQRLTGSGTTHFHNVRVEADEIE-PDSLTTGYGVPHSNSLAQLLVTATVAGILRNIL 259 Query: 244 RDGAALLGKRR-RNYYYAPTPSAAQDPILLTALGERDADAFATRAVVLAAAVEADRAYAA 302 D ALL R+ R++Y+A T A DP+L +G+ A+A+A ++LAAA D + A Sbjct: 260 TDSVALLNSRKDRHFYFAQTERVADDPLLQQIIGQLSANAYAAEVLILAAADAHDLVFQA 319 Query: 303 LKANAYDADDRLQDAAAAAARAKITVDRIAHHAATALFDIAGASATLAQFNLDRHWRNIR 362 + DA+ Q A+ AA++AK+ VD + + LFD+AGASAT NLDRHWRN R Sbjct: 320 RERGEPDAELAHQ-ASLAASKAKLIVDDLTIRGGSQLFDVAGASATRRAKNLDRHWRNAR 378 Query: 363 TISTHNPTSHKAYALGNLSVNQVRLPTQGFF 393 T+++HNP + KA A+G+ ++ LP +GFF Sbjct: 379 TLASHNPAALKARAIGDYELHGTWLPEKGFF 409 >ref|YP_320625.1| putative acyl-CoA dehydrogenase [Anabaena variabilis ATCC 29413] gb|ABA19730.1| putative acyl-CoA dehydrogenase [Anabaena variabilis ATCC 29413] Length = 412 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 173/387 (44%), Positives = 236/387 (60%), Gaps = 4/387 (1%) Query: 8 LLQRIADGAAQRDAQREQPFDVIAEVKATGFGAGRLDADYGGGGATFVETLDTAIQLGAA 67 L IA GA++RD R PFDV+ ++ + GA R+ GGGG+T E + I+LG A Sbjct: 29 LFDFIALGASERDRDRILPFDVVDLIRRSRLGALRIPVTEGGGGSTARELFEVVIKLGDA 88 Query: 68 DPNVAHIWRNHHVALERLLNAPLQHAGVQRLRERVRAGDLVGASHTELGQPQIGGNAPLA 127 DPNVAHI RNH ER+L + +R + V G ++G + TEL + GG + Sbjct: 89 DPNVAHIVRNHFSVTERILRSQRTERN-RRWLKAVADGAIIGLASTELEVKRAGGGQVVN 147 Query: 128 TRLVRQGDHYVLNGQKFYSTGSLFADWLHVTVSVEDGRRAVVLLPRQREGVQTVDDWFGM 187 T+L GD Y LNG K+YSTGSL+AD + V V V DG A +L+P REG++ VDDW G Sbjct: 148 TKLTPDGDGYRLNGTKYYSTGSLYADLIFVRVLVPDGTTAFILIPTNREGIELVDDWDGF 207 Query: 188 GQRLTGSGTTIFENVVVAADEVVLPDQVPARQAVFGSTIAQLFLTSVIAGVVSAVARDGA 247 GQRLTG+GTT F NV V A+EV+ + + + QLFLT++ AG++ +V RD Sbjct: 208 GQRLTGTGTTNFTNVRVEAEEVIFETDTDKDYLPY-NIVPQLFLTAINAGIIRSVLRDAT 266 Query: 248 ALLGKRRRNYYYAPTPSAAQDPILLTALGERDADAFATRAVVLAAAVEADRAYAALKANA 307 L+ R R +Y+A + AA DPIL +G+ A AFA A+VLAAA DR AA KA + Sbjct: 267 TLVHNRSRTFYHAVSEQAADDPILQQTVGQISAHAFAAEAIVLAAADGLDRLSAA-KAQS 325 Query: 308 YDADDRLQ-DAAAAAARAKITVDRIAHHAATALFDIAGASATLAQFNLDRHWRNIRTIST 366 +A+ + + + AA+AK+ VD +A +AT LF++ GAS T N DRHWRN RT+S+ Sbjct: 326 EEAETAVALETSLNAAKAKLIVDDLALRSATLLFEVGGASTTKKSSNFDRHWRNARTLSS 385 Query: 367 HNPTSHKAYALGNLSVNQVRLPTQGFF 393 HNP KA A+G+ +N LP +GFF Sbjct: 386 HNPNHFKARAIGDYEINGKPLPQRGFF 412 >ref|YP_001418353.1| acyl-CoA dehydrogenase type 2 [Xanthobacter autotrophicus Py2] gb|ABS68696.1| Acyl-CoA dehydrogenase type 2 domain [Xanthobacter autotrophicus Py2] Length = 409 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 179/386 (46%), Positives = 236/386 (61%), Gaps = 2/386 (0%) Query: 8 LLQRIADGAAQRDAQREQPFDVIAEVKATGFGAGRLDADYGGGGATFVETLDTAIQLGAA 67 L+ I G+++R+ QR PF+ + ++ FGA RL + GG GA+F E A++L AA Sbjct: 26 LIAHIGRGSSEREHQRILPFEAVDLLREARFGALRLAKEGGGAGASFRELYALALELAAA 85 Query: 68 DPNVAHIWRNHHVALERLLNAPLQHAGVQRLRERVRAGDLVGASHTELGQPQIGGNAPLA 127 D NVAHI+RNH E+ P A + +++VR G L G + TE GG P Sbjct: 86 DANVAHIFRNHFTVAEQFTRIPTD-ARAREWQQQVRDGALFGLASTEANASPAGGGVPTD 144 Query: 128 TRLVRQGDHYVLNGQKFYSTGSLFADWLHVTVSVEDGRRAVVLLPRQREGVQTVDDWFGM 187 T L GD + L+G K+YSTG+LFAD + V +DGR A V++P +REG++ VDDW G Sbjct: 145 TVLSPDGDGFRLDGVKYYSTGTLFADAMLVRAGTKDGRVASVIIPTKREGLEVVDDWDGA 204 Query: 188 GQRLTGSGTTIFENVVVAADEVVLPDQVPARQAVFGSTIAQLFLTSVIAGVVSAVARDGA 247 GQRLTGSGTT F V V ADE + + +T AQLFLT+V+AG+V V D Sbjct: 205 GQRLTGSGTTRFHGVRVEADEAIFDTPDRGYGLAYSNTQAQLFLTTVVAGIVRGVLEDAI 264 Query: 248 ALLGKRRRNYYYAPTPSAAQDPILLTALGERDADAFATRAVVLAAAVEADRAYAALKANA 307 AL+ +R+R++YYAPTP+ DP L +G+ + AFA A+VLAAA DR A N Sbjct: 265 ALVTRRKRSFYYAPTPNPVDDPFLQQTIGQIASHAFAAEAIVLAAADALDRVSRARDRNE 324 Query: 308 YDADDRLQDAAAAAARAKITVDRIAHHAATALFDIAGASATLAQFNLDRHWRNIRTISTH 367 AD DAA AAA+AKI VD ++ A T LF++ GASAT NLDRHWRN RTI+ H Sbjct: 325 -PADALAADAARAAAQAKIVVDELSLRAGTLLFEVGGASATERSVNLDRHWRNARTIAAH 383 Query: 368 NPTSHKAYALGNLSVNQVRLPTQGFF 393 NP S+KA A+G L V LP++GFF Sbjct: 384 NPASYKAQAIGALLVKGTPLPSKGFF 409 >ref|YP_001239306.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ35400.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 409 Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 154/379 (40%), Positives = 213/379 (56%), Gaps = 2/379 (0%) Query: 15 GAAQRDAQREQPFDVIAEVKATGFGAGRLDADYGGGGATFVETLDTAIQLGAADPNVAHI 74 G +R+ +R P IA +K GA RL GGGG++ + I+L AD NVAHI Sbjct: 33 GEPERERERILPHQQIALIKQARLGALRLPVAAGGGGSSIRDLFAIVIRLAEADANVAHI 92 Query: 75 WRNHHVALERLLNAPLQHAGVQRLRERVRAGDLVGASHTELGQPQIGGNAPLATRLVRQG 134 RNH +ERL+ P + + ++ V G ++G + TEL PQ+G P T G Sbjct: 93 LRNHFSVVERLVRNP-RDDQAREWQKAVAGGAIIGLATTELDSPQVGNITP-NTTFTPDG 150 Query: 135 DHYVLNGQKFYSTGSLFADWLHVTVSVEDGRRAVVLLPRQREGVQTVDDWFGMGQRLTGS 194 D Y+LNG K+YSTG+L++D + V + DGR ++P R+G++ +DDW GMGQRLT + Sbjct: 151 DDYLLNGTKYYSTGTLYSDLVLVRAADPDGRPGATIIPLDRDGIELIDDWDGMGQRLTAT 210 Query: 195 GTTIFENVVVAADEVVLPDQVPARQAVFGSTIAQLFLTSVIAGVVSAVARDGAALLGKRR 254 GTT F NV V E+V + +T AQLFLT+ +AG+ A RD AL+ R+ Sbjct: 211 GTTHFRNVRVKRQEIVFDAPDIGYGVPYSNTFAQLFLTAAVAGISRAALRDAIALVRSRK 270 Query: 255 RNYYYAPTPSAAQDPILLTALGERDADAFATRAVVLAAAVEADRAYAALKANAYDADDRL 314 R +YYAP DP+L +G+ + A A VVL AA D A A A DA++ Sbjct: 271 RTFYYAPHEKPTDDPLLQHTIGQIASAAHAAETVVLVAAEALDAATDAFDAGRADAEELA 330 Query: 315 QDAAAAAARAKITVDRIAHHAATALFDIAGASATLAQFNLDRHWRNIRTISTHNPTSHKA 374 AA +A+AKI D A +FD+ GAS+T N DRHWRN RT+S+HNP ++K Sbjct: 331 HRAALLSAQAKIVADDAAIRNGGLIFDVGGASSTKKATNFDRHWRNARTLSSHNPVTYKE 390 Query: 375 YALGNLSVNQVRLPTQGFF 393 A+G +N LP +GFF Sbjct: 391 RAIGQFLINGTPLPAKGFF 409