BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3182.p (410 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01739675.1| Amidophosphoribosyl transferase [Marinobacter... 236 6e-60 ref|YP_004065058.1| Amidophosphoribosyl transferase [Pseudoalter... 218 1e-54 ref|YP_004436727.1| HipA domain protein [Glaciecola agarilytica ... 214 3e-53 ref|YP_527511.1| amidophosphoribosyl transferase [Saccharophagus... 208 2e-51 ref|YP_001230856.1| HipA domain-containing protein [Geobacter ur... 202 8e-50 >ref|ZP_01739675.1| Amidophosphoribosyl transferase [Marinobacter sp. ELB17] gb|EAZ97472.1| Amidophosphoribosyl transferase [Marinobacter sp. ELB17] Length = 409 Score = 236 bits (602), Expect = 6e-60, Method: Composition-based stats. Identities = 147/390 (37%), Positives = 206/390 (52%), Gaps = 14/390 (3%) Query: 17 PRPVAGFALDANGDGRLGYGKHYVAHPDAFSLDPVHLPLQTDLHTVRRRRDGSFGVLSDA 76 P PV G + G Y K ++A+P A++LDP+H+PL T R FGVL+D+ Sbjct: 19 PVPV-GVIVKDEGIFSFAYAKSWLANPIAYALDPLHIPLDTQTFQSNRL----FGVLADS 73 Query: 77 GPNAWGVRLTASINRQYGRPQPETPVDWFIHCWHFGSGCLGFSEHHSVVPVPGNRPEPLS 136 P+ WG R+ + ++Q P ++W + G G L FS S V P N P LS Sbjct: 74 LPDNWGQRVILATHKQ----APANEIEWLLSARGRGVGALAFSASRSKVQ-PSNTPPKLS 128 Query: 137 RLDERQTHAIEALTGDPDSELDEEALRLFFPGASLGGVRPKTVVLHEGREAIAKFSRLDD 196 LD T + P D E + L G+S GG RPKT++ HE E +AK SR DD Sbjct: 129 DLDRVLTAMDDIQASRPVD--DPELIHLIEYGSSFGGARPKTIIQHEDTEWLAKLSRHDD 186 Query: 197 RFDVPTVEYATLRLAHQAGIDVPDFELVTLGSRSLLLLTRFDRTDDGRRLHYLSANSLID 256 FD E A+L +A Q G+DVP+F++ G R +LL++RFDR HYLS S + Sbjct: 187 TFDQIGAEAASLAMAKQLGLDVPNFQVHMSGKRPVLLVSRFDRESGQPSAHYLSGQSALA 246 Query: 257 IDQVNPGLLRTRYSYAGIAEALRPLDDYAVRDAHALFRRMVFNILIGNVDDHMRNHALLR 316 ++ YSY G+A +R L +D LF RM FN+ IGN DDH++NH L Sbjct: 247 TRKIQESDFAKDYSYQGLATVIRKLSSQPKQDLTELFTRMAFNVAIGNTDDHLKNHGFLF 306 Query: 317 DTRGRYRLSPAFDLLPHLDAAYLPQSIGVGDHGAASTTINALSQSRRFLLTPEEARTIIE 376 + L+PAFDLLPH + +IG+G +G +ST N LS+S F L+ ++A I++ Sbjct: 307 KPDQGWSLAPAFDLLPHPN-QIAQHAIGIGVNGRSSTISNLLSRSSAFGLSDQQANRIVD 365 Query: 377 EVRSCVAGWRRLFAECGVSRTDLQLL-GTC 405 +V S F + GV TD ++L G C Sbjct: 366 QVLSIADEAHHYFGQYGVPETDNRVLSGIC 395 >ref|YP_004065058.1| Amidophosphoribosyl transferase [Pseudoalteromonas sp. SM9913] gb|ADT70149.1| Amidophosphoribosyl transferase [Pseudoalteromonas sp. SM9913] Length = 401 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 143/397 (36%), Positives = 214/397 (53%), Gaps = 18/397 (4%) Query: 15 DAPRPVAGFALDAN-GDGRLGYGKHYVAHPDAFSLDPVHLPLQTDLHTVRRRRDGSFGVL 73 D+P F L+ G G YGK Y+A DAF+LDP+HLPLQ + + + G FGVL Sbjct: 14 DSPVICGFFKLNTQTGRGEFNYGKSYLARSDAFALDPLHLPLQPGIVSYSANK-GVFGVL 72 Query: 74 SDAGPNAWGVRLTASINRQYGRPQPETPVDWFIHCWHFGSGCLGFSEHHSVVPVPGNRPE 133 SDAG ++WG +L S++ +P+ +++ + +G G L FS S N+ Sbjct: 73 SDAGADSWGRKLILSLHNT----KPKNELEFLLAGSGYGVGALVFSLSRSASKHKANKNT 128 Query: 134 --PLSRLDERQTHAIEALTGDPDSELDEEALRLFFPGASLGGVRPKTVVLHEGREAIAKF 191 L+ LD+ + + T + +EA + F G S+GG RPKT V + + +AKF Sbjct: 129 LADLALLDQAKDDLLANKT------ISQEAKKAFEFGQSMGGARPKTSVKIDQKLYLAKF 182 Query: 192 SRLDDRFDVPTVEYATLRLAHQAGIDVPDFELVTLGSRSLLLLTRFDRTDDGRRLHYLSA 251 +R DD F++ E+ + +A++ GI + + + +LL+ RFD +DD H+LSA Sbjct: 183 NRQDDLFNLARAEHGAMCMANELGIRTANTRIHETENGDVLLVERFDVSDDLPTHHFLSA 242 Query: 252 NSLIDIDQVNPGLLRTRYSYAGIAEALRPLDDYAVRDAHALFRRMVFNILIGNVDDHMRN 311 NSL+ +V L T YSY +AE +R DA L++RMVFN+ IGN DDH RN Sbjct: 243 NSLLQKPKVAISDLATYYSYGELAEFIRHHTGEFAADATELYKRMVFNVFIGNTDDHSRN 302 Query: 312 HALLRDTRGR-YRLSPAFDLLPHLDAAYLPQSIGVGDHGAASTTINALSQSRRFLLTPEE 370 HA L G+ +R+SPA+D+ P ++ IG+GD G ++ N LSQ++RF L + Sbjct: 303 HAFLYHFAGQTWRMSPAYDITPINNSK--QHGIGLGDDGRYASIDNLLSQAKRFGLNKAQ 360 Query: 371 ARTIIEEVRSCVAGWRRLFAE-CGVSRTDLQLLGTCI 406 A II EV S W F +S D++ L + I Sbjct: 361 ATKIITEVESYTRQWPTHFKRFANISDIDIKRLESVI 397 >ref|YP_004436727.1| HipA domain protein [Glaciecola agarilytica 4H-3-7+YE-5] gb|AEE25459.1| HipA domain protein [Glaciecola sp. 4H-3-7+YE-5] Length = 398 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 138/385 (35%), Positives = 208/385 (54%), Gaps = 27/385 (7%) Query: 26 DANGDGRLGYGKHYVAHPDAFSLDPVHLPLQTDLHTVRRRRDGSFGVLSDAGPNAWGVRL 85 D G+ YGK Y+ PDAF LDP++LPL ++ + R +G FG L+DAG ++WG ++ Sbjct: 26 DNGKPGQFRYGKSYLGRPDAFPLDPINLPLSDEVFSTSAR-NGLFGALTDAGADSWGEKV 84 Query: 86 TASINRQYGRPQPETPVDWFIHCWHFGSGCLGFSEHHSVVP------VPGNRPEPLSRLD 139 S+++ +P+ +++ + G G L FS S + G+ P L Sbjct: 85 ILSLHKT----KPKNKLEFLLAGSGMGVGALVFSLSQSASKPKWNKNMVGDVPMLL---- 136 Query: 140 ERQTHAIEALTGDPDSELDEEALRLFFPGASLGGVRPKTVVLHEGREAIAKFSRLDDRFD 199 R AI D + EEA + F G+S+GG RPKT+V R +AKF+R DD F+ Sbjct: 137 -RAKDAILR-----DEAIPEEAKKAFEYGSSMGGARPKTIVQDGDRSYLAKFNRPDDLFN 190 Query: 200 VPTVEYATLRLAHQAGIDVPDFELVTLGSRSLLLLTRFDRTDDGRRLHYLSANSLIDIDQ 259 VE+A++ + + G V + + +LL+ RFD H+LSANS+ ++ + Sbjct: 191 TVKVEHASMTMLKELGGKVANTSTLHSHGSDILLVERFDLLKGRPIAHFLSANSIFNLPK 250 Query: 260 VNPGLLRTRYSYAGIAEALRPLDDYAVRDAHALFRRMVFNILIGNVDDHMRNHALLR--D 317 +N ++T Y+Y +AE + D + DAH L++RM FN+ +GN DDH RNHALL D Sbjct: 251 LNSQSMQTTYTYGFLAEFIMKYGDNPL-DAHDLYKRMAFNVFMGNTDDHSRNHALLYHFD 309 Query: 318 TRGRYRLSPAFDLLPHLDAAYLPQSIGVGDHGAASTTINALSQSRRFLLTPEEARTIIEE 377 ++ R+ LSPA+D+LP ++ IG+G G T N LSQS RF L ++A+ II Sbjct: 310 SK-RWGLSPAYDVLPINNSK--QHGIGIGQEGREGTISNLLSQSMRFGLRADKAQKIINN 366 Query: 378 VRSCVAGWRRLFAECGVSRTDLQLL 402 V+ W FA GV DL+ L Sbjct: 367 VKELCTEWPSYFAAHGVGGGDLERL 391 >ref|YP_527511.1| amidophosphoribosyl transferase [Saccharophagus degradans 2-40] gb|ABD81299.1| HipA-like protein [Saccharophagus degradans 2-40] Length = 404 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 133/395 (33%), Positives = 202/395 (51%), Gaps = 14/395 (3%) Query: 12 SNPDAPRPVAGFALDANGDGRLGYGKHYVAHPDAFSLDPVHLPLQTDLHTVRRRRDGSFG 71 ++P + AG G G Y ++A+ A+ LDP++LPL T + + G FG Sbjct: 11 ASPTGEQHFAGTLESKTGTGTFTYAASWLANDWAYPLDPLNLPLSTKRYRALNKH-GLFG 69 Query: 72 VLSDAGPNAWGVRLTASINRQYGRPQPETPVDWFIHCWHFGSGCLGFSEHHSVVPVPGNR 131 V DA P+ WG R+ + P ++ I G GCL +S VP Sbjct: 70 VFCDAAPDDWGTRIMLLRHEH----APANELERLIRTSGGGVGCLRYSLSRGQAKVPA-- 123 Query: 132 PEPLSRLDERQTHAIEALTGDPDSELDEEALRLFFPGASLGGVRPKTVVLHEGREAIAKF 191 PL + A A + +L E L L PG+S+GG RPK V + + KF Sbjct: 124 --PLPTMQHLHDLAKAAEKLELKHKLAPEELALLEPGSSMGGARPKVTVADDETRWLVKF 181 Query: 192 SRLDDRFDVPTVEYATLR-LAHQAGIDVPDFELVTLGSRSLLLLTRFDRTDDGRRLHYLS 250 ++ D DVP +EY +++ L G++VP+ L+ +G ++ + RFD + + H++S Sbjct: 182 AKAWDLVDVPLLEYCSMQFLKDVLGLNVPETRLINVGGKNAFAIVRFDGVANSPK-HFIS 240 Query: 251 ANSLIDIDQVNP--GLLRTRYSYAGIAEALRPLDDYAVRDAHALFRRMVFNILIGNVDDH 308 ANSL + D++ P R YSY +A +R D LF RMV NI++GN DDH Sbjct: 241 ANSLFNQDRIRPIEDSKRNPYSYCNLASIIRKHCSNFKEDNKELFMRMVANIVMGNTDDH 300 Query: 309 MRNHALLRD-TRGRYRLSPAFDLLPHLDAAYLPQSIGVGDHGAASTTINALSQSRRFLLT 367 RNHALL D T +++LSPA+D+LP + Q++GVG+HGA +T NALS + F L Sbjct: 301 ARNHALLFDITTAKWQLSPAYDMLPIVATRSGLQAMGVGEHGAKATLENALSYANLFGLK 360 Query: 368 PEEARTIIEEVRSCVAGWRRLFAECGVSRTDLQLL 402 EA+ + ++V + GW + G+ D+QL+ Sbjct: 361 TAEAQALCQKVSNAYTGWPDYCLQNGMQAADVQLV 395 >ref|YP_001230856.1| HipA domain-containing protein [Geobacter uraniireducens Rf4] gb|ABQ26283.1| HipA domain protein [Geobacter uraniireducens Rf4] Length = 412 Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats. Identities = 139/379 (36%), Positives = 195/379 (51%), Gaps = 21/379 (5%) Query: 28 NGDGRLGYGKHYVAHPDAFSLDPVHLPLQTDLHTVRRRRDGSFGVLSDAGPNAWGVRLTA 87 +G GR YG+ Y+ P+A +DPV LPL V G +G D+ P+ WG + A Sbjct: 34 DGIGRFAYGRRYLERPNALPVDPVALPLGGMPRDVTTN-GGLYGAFRDSSPDYWGRLVVA 92 Query: 88 SINRQYGRPQPETPVDWFIHCWHFGSGCLGF-SEHHSVVPVPGNRPEPLSRLDERQTHAI 146 + R P+ D+ + GCL F + PV G P L E A Sbjct: 93 AEARM--PPEALDETDYLLRANASRIGCLDFRASLEQGEPVVG--PPGFQSLAELLDAAS 148 Query: 147 EALTGDPDSELDEEALRLFFPGASLGGVRPKTVVLHEGREAIAKFSRLDDRFDVPTVEYA 206 + G ++ ++ LRL G+S+GG RPK V + IAKF DD + P VEYA Sbjct: 149 DLAAG---KQVRQDLLRLLEQGSSVGGARPKCTVELDDALWIAKFPAKDDTINFPKVEYA 205 Query: 207 TLRLAHQAGIDVPDFELVTLGSRSLLLLTRFDRTDDG---RRLHYLSANSLIDIDQVNPG 263 T+ LA + GI+VP +V +G R +LL+ RFDR G +R +LSA SL++ D+ + Sbjct: 206 TMTLAGRCGINVPTMRVVAIGGRDVLLVKRFDRHKSGGGYQRFGFLSALSLMEWDERD-- 263 Query: 264 LLRTRYSYAGIAEALRPLDDYAVRDAHALFRRMVFNILIGNVDDHMRNHALLRDTRGRYR 323 RT +SY +A+ +R LFRRM+FN+L N DDH RNH L R Sbjct: 264 --RTEWSYPALADRMRATILAQRAQTGELFRRMLFNVLCRNTDDHPRNHGFLWGERAT-A 320 Query: 324 LSPAFDLLPHLD----AAYLPQSIGVGDHGAASTTINALSQSRRFLLTPEEARTIIEEVR 379 LSPA+D++P L S+ +G+ G +T NA+S RF LT EA +I+++R Sbjct: 321 LSPAYDIVPSLARPGVTTEFSLSMSLGERGREATLANAVSMHARFGLTRSEAEQVIDDMR 380 Query: 380 SCVAGWRRLFAECGVSRTD 398 +CVA W +LF CGVS D Sbjct: 381 ACVAKWEQLFITCGVSEAD 399