BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3158.p (286 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_769457.1| transmembrane component of ABC transporter [Rhi... 247 1e-63 gb|EGE56167.1| spermidine/putrescine ABC transporter, permease c... 244 8e-63 ref|ZP_03529225.1| putative transmembrane component of ABC trans... 244 1e-62 ref|YP_002282653.1| binding-protein-dependent transporters inner... 244 1e-62 ref|YP_001979777.1| spermidine/putrescine ABC transporter permea... 243 3e-62 >ref|YP_769457.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] emb|CAK09369.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 275 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 151/262 (57%), Positives = 195/262 (74%), Gaps = 9/262 (3%) Query: 22 SVCFLLPVAALLLDAFRIGGPDSLDGGPLQWSLARFADFFAEPLHLQVLWRTLRIAALVT 81 +V FLLPVA LL + FR G WSL+ +ADFF++ L+ V RT R+ VT Sbjct: 20 TVVFLLPVAILLSEGFRAGS---------SWSLSAYADFFSQTLNRTVFLRTFRLGLEVT 70 Query: 82 LCSALLCYPAAQAIVRVHARWRGLVLGMMILPLMVSPIARTYAWIVLFGRNGAVNAVLLH 141 SA++ Y AA AIV + A+ +G ++G++ LPLM+SP+ARTYAWIV+ GR G VN + Sbjct: 71 AVSAVIGYAAAFAIVNLPAKGKGRMIGLITLPLMISPVARTYAWIVILGRTGIVNQAITG 130 Query: 142 LGLADEPQRLLFTEMAVFVGLLQLLLPLMLMSLVSAMENISADLALAASTLGANAWQVFT 201 LGL+ EP RLLFTE AVF+GLLQL LPLM++SL+SA+EN+ D AA LGAN +QVF Sbjct: 131 LGLSAEPLRLLFTETAVFIGLLQLFLPLMILSLISALENMPKDAIPAARVLGANWFQVFW 190 Query: 202 RVTLPLTQEGLIVGGTLVFTGSVTAYVTPALLGGPKVLMLETLLYQKVSVESDFGTANVI 261 +V LPLT+EGL+VGGTLVFTGS+TAY+TPA+LGG KVLMLETL+YQ+VSV +DF +A+VI Sbjct: 191 KVILPLTREGLVVGGTLVFTGSLTAYITPAVLGGSKVLMLETLMYQQVSVANDFVSASVI 250 Query: 262 AVILVAMTLAVNAVLKRIAAPR 283 A IL+ M+ A N +LKR+A R Sbjct: 251 AFILIVMSFAANILLKRLATAR 272 >gb|EGE56167.1| spermidine/putrescine ABC transporter, permease component I protein [Rhizobium etli CNPAF512] Length = 275 Score = 244 bits (624), Expect = 8e-63, Method: Composition-based stats. Identities = 148/262 (56%), Positives = 195/262 (74%), Gaps = 9/262 (3%) Query: 22 SVCFLLPVAALLLDAFRIGGPDSLDGGPLQWSLARFADFFAEPLHLQVLWRTLRIAALVT 81 ++ FLLPVA LL + FR GG W+L+ +ADFF++ L+ V R+ R+ VT Sbjct: 20 TLVFLLPVAILLSEGFRAGG---------GWTLSAYADFFSQTLNRTVFLRSFRLGLEVT 70 Query: 82 LCSALLCYPAAQAIVRVHARWRGLVLGMMILPLMVSPIARTYAWIVLFGRNGAVNAVLLH 141 SA++ Y AA AIV + A +G ++G++ LPLM+SP+ARTYAWIV+ GR G VN + Sbjct: 71 AVSAIIGYAAAFAIVNLPANGKGRMIGLVTLPLMISPVARTYAWIVILGRTGIVNQAITG 130 Query: 142 LGLADEPQRLLFTEMAVFVGLLQLLLPLMLMSLVSAMENISADLALAASTLGANAWQVFT 201 LGL+ EP RLLFTE AVF+GLLQL LPLM++SL+SA+EN+ D AA LGAN +QVF Sbjct: 131 LGLSAEPLRLLFTETAVFIGLLQLFLPLMILSLISALENMPRDAIPAARVLGANWFQVFW 190 Query: 202 RVTLPLTQEGLIVGGTLVFTGSVTAYVTPALLGGPKVLMLETLLYQKVSVESDFGTANVI 261 +V LPLT+EGL++GGTLVFTGS+TAY+TPA+LGG KVLMLETL+YQ+VSV +DF +A+VI Sbjct: 191 KVVLPLTREGLVIGGTLVFTGSLTAYITPAVLGGSKVLMLETLMYQQVSVANDFVSASVI 250 Query: 262 AVILVAMTLAVNAVLKRIAAPR 283 A IL+ M+ A N +LKR+A R Sbjct: 251 AFILIVMSFAANILLKRLATAR 272 >ref|ZP_03529225.1| putative transmembrane component of ABC transporter [Rhizobium etli CIAT 894] Length = 275 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 148/265 (55%), Positives = 195/265 (73%), Gaps = 9/265 (3%) Query: 19 IFTSVCFLLPVAALLLDAFRIGGPDSLDGGPLQWSLARFADFFAEPLHLQVLWRTLRIAA 78 IF ++ FLLPV LL + FR GG W+L+ +A+FF+ L+ V RT R+ Sbjct: 17 IFATLVFLLPVTILLSEGFRAGGA---------WTLSAYANFFSATLNRTVFLRTFRLGL 67 Query: 79 LVTLCSALLCYPAAQAIVRVHARWRGLVLGMMILPLMVSPIARTYAWIVLFGRNGAVNAV 138 VT SA++ Y AA AIV + + +G ++G++ LPLM+SP+ARTYAWIV+ GR G VN Sbjct: 68 EVTAVSAIIGYAAAFAIVNLPPKGKGRMIGLITLPLMISPVARTYAWIVILGRTGIVNQA 127 Query: 139 LLHLGLADEPQRLLFTEMAVFVGLLQLLLPLMLMSLVSAMENISADLALAASTLGANAWQ 198 + LGL+ EP RLLFTE AVF+GLLQL LPLM++SL+SA+EN+ D AA LGAN +Q Sbjct: 128 ITGLGLSAEPLRLLFTETAVFIGLLQLFLPLMILSLISALENMPKDAIPAARVLGANWFQ 187 Query: 199 VFTRVTLPLTQEGLIVGGTLVFTGSVTAYVTPALLGGPKVLMLETLLYQKVSVESDFGTA 258 VF +V LPLT+EGL++GGTLVFTGS+TAY+TPA+LGG KVLMLETL+YQ+VSV +DF +A Sbjct: 188 VFWKVILPLTREGLVIGGTLVFTGSLTAYITPAVLGGSKVLMLETLMYQQVSVANDFVSA 247 Query: 259 NVIAVILVAMTLAVNAVLKRIAAPR 283 +VIA IL+ M+ A N +LKR+A R Sbjct: 248 SVIAFILIVMSFAANILLKRLATAR 272 >ref|YP_002282653.1| binding-protein-dependent transporters inner membrane component [Rhizobium leguminosarum bv. trifolii WSM2304] gb|ACI56427.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 275 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 150/262 (57%), Positives = 193/262 (73%), Gaps = 9/262 (3%) Query: 22 SVCFLLPVAALLLDAFRIGGPDSLDGGPLQWSLARFADFFAEPLHLQVLWRTLRIAALVT 81 +V FLLPVA LL + FR GG W+L+ +A FF+E L+ V R+ R+ VT Sbjct: 20 TVVFLLPVAVLLSEGFRAGG---------GWTLSAYAGFFSETLNRTVFLRSFRLGLEVT 70 Query: 82 LCSALLCYPAAQAIVRVHARWRGLVLGMMILPLMVSPIARTYAWIVLFGRNGAVNAVLLH 141 SA++ Y AA AIV + +G ++G++ LPLM+SP+ARTYAWIV+ GR G VN + Sbjct: 71 AVSAVIGYAAAFAIVNLPPNGKGRMIGLVTLPLMISPVARTYAWIVILGRTGIVNQAITG 130 Query: 142 LGLADEPQRLLFTEMAVFVGLLQLLLPLMLMSLVSAMENISADLALAASTLGANAWQVFT 201 LGL+ EP RLLFTE AVF+GLLQL LPLM++SL+SA+EN+ D AA LGAN +QVF Sbjct: 131 LGLSAEPLRLLFTETAVFIGLLQLFLPLMILSLISALENMPKDAIPAARVLGANWFQVFW 190 Query: 202 RVTLPLTQEGLIVGGTLVFTGSVTAYVTPALLGGPKVLMLETLLYQKVSVESDFGTANVI 261 +V LPLT+EGL+VGGTLVFTGS+TAY+TPA+LGG KVLMLETLLYQ+VSV +DF +A+VI Sbjct: 191 KVILPLTREGLVVGGTLVFTGSLTAYITPAVLGGSKVLMLETLLYQQVSVANDFVSASVI 250 Query: 262 AVILVAMTLAVNAVLKRIAAPR 283 A IL+ M+ A N +LKR+A R Sbjct: 251 AFILIIMSFAANILLKRLATAR 272 >ref|YP_001979777.1| spermidine/putrescine ABC transporter permease component I protein [Rhizobium etli CIAT 652] gb|ACE92599.1| spermidine/putrescine ABC transporter, permease component I protein [Rhizobium etli CIAT 652] Length = 275 Score = 243 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 146/262 (55%), Positives = 194/262 (74%), Gaps = 9/262 (3%) Query: 22 SVCFLLPVAALLLDAFRIGGPDSLDGGPLQWSLARFADFFAEPLHLQVLWRTLRIAALVT 81 ++ FL PVA LL + FR GG W+L+ +ADFF++ L+ V R+ R+ VT Sbjct: 20 TLVFLFPVAILLSEGFRAGG---------GWTLSAYADFFSQTLNRTVFLRSFRLGLEVT 70 Query: 82 LCSALLCYPAAQAIVRVHARWRGLVLGMMILPLMVSPIARTYAWIVLFGRNGAVNAVLLH 141 SA++ Y AA AIV + A +G ++G++ LPLM+SP+ARTYAWIV+ GR G VN + Sbjct: 71 AVSAIIGYAAAFAIVNLPANGKGRMIGLVTLPLMISPVARTYAWIVILGRTGIVNQAITG 130 Query: 142 LGLADEPQRLLFTEMAVFVGLLQLLLPLMLMSLVSAMENISADLALAASTLGANAWQVFT 201 LGL+ EP RLLFTE AVF+GLLQL LPLM++SL+SA+EN+ D AA LGAN +QVF Sbjct: 131 LGLSAEPLRLLFTETAVFIGLLQLFLPLMILSLISALENMPRDAIPAARVLGANWFQVFW 190 Query: 202 RVTLPLTQEGLIVGGTLVFTGSVTAYVTPALLGGPKVLMLETLLYQKVSVESDFGTANVI 261 +V LPLT+EGL++GGTLVFTGS+TAY+TPA+LGG KVLMLETL+YQ+VSV ++F +A+VI Sbjct: 191 KVVLPLTREGLVIGGTLVFTGSLTAYITPAVLGGSKVLMLETLMYQQVSVANNFVSASVI 250 Query: 262 AVILVAMTLAVNAVLKRIAAPR 283 A IL+ M+ A N +LKR+A R Sbjct: 251 AFILIVMSFAANILLKRLATAR 272