BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3157.p (259 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_03529224.1| spermidine/putrescine ABC transporter, permea... 224 9e-57 ref|NP_356232.1| ABC transporter, membrane spanning protein [Agr... 224 9e-57 gb|EGP55962.1| ABC transporter, membrane spanning protein [Agrob... 224 1e-56 ref|YP_004444552.1| spermidine/putrescine ABC transporter, membr... 223 2e-56 ref|YP_769458.1| transmembrane component of ABC transporter [Rhi... 209 3e-52 >ref|ZP_03529224.1| spermidine/putrescine ABC transporter, permease component II protein [Rhizobium etli CIAT 894] Length = 331 Score = 224 bits (572), Expect = 9e-57, Method: Composition-based stats. Identities = 124/240 (51%), Positives = 170/240 (70%) Query: 20 GPFIIVFLAGFSGGETLAFPPPSYSLRWIVSVLQAEEFRQAFGTSLQIGLLATVIALLLG 79 GPF+I+ A S G+TLAFPP SLRW++ V E FR +F S+ + + T+ AL+LG Sbjct: 20 GPFLIIIAASLSSGDTLAFPPQGLSLRWVMKVFTIESFRDSFAMSMFLAVFGTLAALVLG 79 Query: 80 VPVAYAMSRMPPPGMAVIKQVLTSPLIIPAMLVGLGLLRHFVLLVDAPVFLGLLIGHVGL 139 +P AYA+SR P ++ +++ P+I+P ++VGL LLR+ V+ + L L H L Sbjct: 80 IPAAYALSRYRLPASETVRTIVSLPIIVPGIIVGLALLRYLVVPFGFDITLALFFSHTAL 139 Query: 140 LTPYAVRVVYSSLANLRVDIEEAAITLGATRLQTFRLVVLPNIRGAVIAAFFLAFVTSFN 199 + PYAVRVV +SL NLR DIEEAA+ LG++RL F VV+PNIRG ++AAF L FVTSFN Sbjct: 140 VLPYAVRVVSASLDNLRSDIEEAAVLLGSSRLGAFFRVVIPNIRGGILAAFILGFVTSFN 199 Query: 200 QVPVSLFLTGPGISTLPIEMLGHMENSFDPSIAALSTLLVLFTMAFVLVTEKVLGISKYM 259 QVPVSLFL+GPG+ TLPI+MLG+ME ++DPSIAALS LL ++ + + E+ LG S+Y+ Sbjct: 200 QVPVSLFLSGPGVRTLPIDMLGYMETTYDPSIAALSALLAFLSIGIIFLAERFLGFSRYV 259 >ref|NP_356232.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] ref|ZP_08530697.1| ABC transporter, membrane spanning protein [Agrobacterium sp. ATCC 31749] gb|AAK89017.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens str. C58] gb|EGL62611.1| ABC transporter, membrane spanning protein [Agrobacterium sp. ATCC 31749] Length = 259 Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats. Identities = 134/259 (51%), Positives = 185/259 (71%) Query: 1 MKQGLFPRVVLWAVMLFLLGPFIIVFLAGFSGGETLAFPPPSYSLRWIVSVLQAEEFRQA 60 M + LF + L V+ FL+GPF+I+ A FS G+TLAFPP +SL+WI V E FR++ Sbjct: 1 MTRQLFIPLTLLLVVGFLIGPFLIIVAASFSAGDTLAFPPQGFSLKWIAKVFTVESFRES 60 Query: 61 FGTSLQIGLLATVIALLLGVPVAYAMSRMPPPGMAVIKQVLTSPLIIPAMLVGLGLLRHF 120 F S+ + + T AL+LG+P +YAMSR P ++ ++++P+I+P ++VGL LLR+F Sbjct: 61 FAMSMFLAIGGTFTALILGIPASYAMSRYKLPFAETVRTIVSAPIIVPGIIVGLALLRYF 120 Query: 121 VLLVDAPVFLGLLIGHVGLLTPYAVRVVYSSLANLRVDIEEAAITLGATRLQTFRLVVLP 180 V+ + L L + H L+ PYAVRVV +SL NLR DIEEAA+ LG++RL F VVLP Sbjct: 121 VVPFGIGITLALFLAHTALILPYAVRVVSASLNNLRSDIEEAAVLLGSSRLGAFFRVVLP 180 Query: 181 NIRGAVIAAFFLAFVTSFNQVPVSLFLTGPGISTLPIEMLGHMENSFDPSIAALSTLLVL 240 NIRG +++AF L FVTSFNQVPVSLFL+GPG+ TLPI+MLG+ME FDPS+AALS+LL Sbjct: 181 NIRGGILSAFILGFVTSFNQVPVSLFLSGPGVRTLPIDMLGYMEIVFDPSVAALSSLLAF 240 Query: 241 FTMAFVLVTEKVLGISKYM 259 ++ V + E+ LG S+Y+ Sbjct: 241 LSIGIVFMAERFLGFSRYV 259 >gb|EGP55962.1| ABC transporter, membrane spanning protein [Agrobacterium tumefaciens F2] Length = 259 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 134/259 (51%), Positives = 185/259 (71%) Query: 1 MKQGLFPRVVLWAVMLFLLGPFIIVFLAGFSGGETLAFPPPSYSLRWIVSVLQAEEFRQA 60 M + LF + L V+ FL+GPF+I+ A FS G+TLAFPP +SL+WI V E FR++ Sbjct: 1 MTRQLFIPLTLLLVVGFLIGPFLIIVAASFSAGDTLAFPPQGFSLKWIAKVFTVESFRES 60 Query: 61 FGTSLQIGLLATVIALLLGVPVAYAMSRMPPPGMAVIKQVLTSPLIIPAMLVGLGLLRHF 120 F S+ + + T AL+LG+P +YAMSR P ++ ++++P+I+P ++VGL LLR+F Sbjct: 61 FAMSMFLAIGGTFAALILGIPASYAMSRYKLPFAETVRTIVSAPIIVPGIIVGLALLRYF 120 Query: 121 VLLVDAPVFLGLLIGHVGLLTPYAVRVVYSSLANLRVDIEEAAITLGATRLQTFRLVVLP 180 V+ + L L + H L+ PYAVRVV +SL NLR DIEEAA+ LG++RL F VVLP Sbjct: 121 VVPFGIGITLALFLAHTALILPYAVRVVSASLNNLRSDIEEAAVLLGSSRLGAFFRVVLP 180 Query: 181 NIRGAVIAAFFLAFVTSFNQVPVSLFLTGPGISTLPIEMLGHMENSFDPSIAALSTLLVL 240 NIRG +++AF L FVTSFNQVPVSLFL+GPG+ TLPI+MLG+ME FDPS+AALS+LL Sbjct: 181 NIRGGILSAFILGFVTSFNQVPVSLFLSGPGVRTLPIDMLGYMEIVFDPSVAALSSLLAF 240 Query: 241 FTMAFVLVTEKVLGISKYM 259 ++ V + E+ LG S+Y+ Sbjct: 241 LSIGIVFMAERFLGFSRYV 259 >ref|YP_004444552.1| spermidine/putrescine ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] gb|ADY67461.1| spermidine/putrescine ABC transporter, membrane spanning protein [Agrobacterium sp. H13-3] Length = 259 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 133/259 (51%), Positives = 184/259 (71%) Query: 1 MKQGLFPRVVLWAVMLFLLGPFIIVFLAGFSGGETLAFPPPSYSLRWIVSVLQAEEFRQA 60 M + LF + L V+ FL+GPF+I+ A FS G+TLAFPP +SL+WI V E FR++ Sbjct: 1 MTRQLFIPLTLLLVVGFLIGPFLIIVAASFSAGDTLAFPPQGFSLKWIAKVFTVESFRES 60 Query: 61 FGTSLQIGLLATVIALLLGVPVAYAMSRMPPPGMAVIKQVLTSPLIIPAMLVGLGLLRHF 120 F S+ + + T AL+LG+P +YAMSR P ++ ++++P+I+P ++VGL LLR+F Sbjct: 61 FAMSMFLAIGGTFTALVLGIPASYAMSRYKLPFAETVRTIVSAPIIVPGIIVGLALLRYF 120 Query: 121 VLLVDAPVFLGLLIGHVGLLTPYAVRVVYSSLANLRVDIEEAAITLGATRLQTFRLVVLP 180 V+ + L L + H L+ PYAVRVV +SL NLR DIEEAA+ LG++R F VVLP Sbjct: 121 VVPFGIGITLALFLAHTALILPYAVRVVSASLNNLRSDIEEAAVLLGSSRFGAFFRVVLP 180 Query: 181 NIRGAVIAAFFLAFVTSFNQVPVSLFLTGPGISTLPIEMLGHMENSFDPSIAALSTLLVL 240 NIRG +++AF L FVTSFNQVPVSLFL+GPG+ TLPI+MLG+ME FDPS+AALS+LL Sbjct: 181 NIRGGILSAFILGFVTSFNQVPVSLFLSGPGVRTLPIDMLGYMEIVFDPSVAALSSLLAF 240 Query: 241 FTMAFVLVTEKVLGISKYM 259 ++ V + E+ LG S+Y+ Sbjct: 241 LSIGIVFLAERFLGFSRYV 259 >ref|YP_769458.1| transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] emb|CAK09370.1| putative transmembrane component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 259 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 133/259 (51%), Positives = 183/259 (70%) Query: 1 MKQGLFPRVVLWAVMLFLLGPFIIVFLAGFSGGETLAFPPPSYSLRWIVSVLQAEEFRQA 60 M LF +VL+ +++FL+GPF+I+ A S G+TLAFPP SLRW++ V E FR + Sbjct: 1 MTLRLFSPLVLFLLLVFLIGPFLIIIAASLSAGDTLAFPPQGLSLRWVMKVFTIESFRDS 60 Query: 61 FGTSLQIGLLATVIALLLGVPVAYAMSRMPPPGMAVIKQVLTSPLIIPAMLVGLGLLRHF 120 F S+ + + T+ ALLLG+P AYA+SR P ++ +++ P+I+P ++VGL LLR+ Sbjct: 61 FAMSMFLAVFGTIAALLLGIPAAYALSRYKLPAAETVRTIVSLPIIVPGIIVGLALLRYL 120 Query: 121 VLLVDAPVFLGLLIGHVGLLTPYAVRVVYSSLANLRVDIEEAAITLGATRLQTFRLVVLP 180 V+ + L L H L+ PYAVRVV +SL NLR DIEEAA+ LG++RL F VV+P Sbjct: 121 VVPFGFNITLALFFAHTALVLPYAVRVVSASLDNLRSDIEEAAVLLGSSRLGAFFRVVMP 180 Query: 181 NIRGAVIAAFFLAFVTSFNQVPVSLFLTGPGISTLPIEMLGHMENSFDPSIAALSTLLVL 240 NIRG ++AAF L FVTSFNQVPVSLFL+GPG+ TLPI+MLG+ME ++DPSIAALS LL Sbjct: 181 NIRGGILAAFILGFVTSFNQVPVSLFLSGPGVRTLPIDMLGYMETTYDPSIAALSALLAF 240 Query: 241 FTMAFVLVTEKVLGISKYM 259 ++ V + E+ LG S+Y+ Sbjct: 241 LSIGIVFLAERFLGFSRYV 259