BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3156.p (337 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_356231.1| ABC transporter, nucleotide binding/ATPase prot... 368 e-100 ref|ZP_08530698.1| ABC transporter, nucleotide binding/ATPase pr... 367 2e-99 gb|EGP55963.1| ABC transporter, ATPase protein [Agrobacterium tu... 367 2e-99 ref|YP_004444553.1| spermidine/putrescine ABC transporter, nucle... 361 9e-98 ref|YP_001979779.1| spermidine/putrescine ABC transporter ATP-bi... 356 3e-96 >ref|NP_356231.1| ABC transporter, nucleotide binding/ATPase protein (spermidine/putrescine) [Agrobacterium tumefaciens str. C58] gb|AAK89016.1| ABC transporter, nucleotide binding/ATPase protein (spermidine/putrescine) [Agrobacterium tumefaciens str. C58] Length = 341 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 187/334 (55%), Positives = 253/334 (75%), Gaps = 1/334 (0%) Query: 2 SYLNLQQVALGYGNARTAVEGLNLAVQRGELISLLGPSGCGKTTTMRAIAGLIDLRAGTI 61 +YL+L +V+L YGN+ AV+ L+L +++GEL++LLGPSGCGKTTTMRAIAGL+ + +G I Sbjct: 5 NYLSLNKVSLAYGNS-IAVKDLDLDIRKGELLALLGPSGCGKTTTMRAIAGLMPVASGRI 63 Query: 62 TLDGRDISRLPPNKRDIGLVFQSYALFPHLNVFDNVAFGLRLRKVPAAELRQRVEKVIAA 121 LDG DI+R+ NKR +GLVFQSYALFPHL V++NVAFGL+L+ + L +V + + Sbjct: 64 DLDGADITRVAANKRAVGLVFQSYALFPHLTVYENVAFGLKLKGMSGKTLDDKVASGLKS 123 Query: 122 VGLAGFEARLPAQMSGGQQQRVALARAIVIEPKLLLLDEPLSNLDAKLRVQMRAELRRIQ 181 VGL+ F +R PA++SGGQQQRVALAR++V+EPK+LLLDEPLSNLDA+LR++MR EL+R+Q Sbjct: 124 VGLSNFASRKPAELSGGQQQRVALARSMVMEPKVLLLDEPLSNLDARLRLEMRTELQRVQ 183 Query: 182 RELGITMLYVTHDQDEALAMSDRIVVMNSGKIEQLDTPEQLFNAPRTRFVANFMGFENLF 241 +E G+TM++VTHDQ EALA++DRIVVM GKIEQ+ TPE+++NAP + FVA+F+GFEN+F Sbjct: 184 KETGVTMIFVTHDQIEALALADRIVVMKGGKIEQIGTPEEIYNAPVSSFVADFVGFENIF 243 Query: 242 DYRDGQLHGAAGQLPLSGLPANTACAGWRVQQVQVGSGPYEGRVLSRGFLGEHVEYLLQT 301 DG L A G+ L+G + + WR + V +GSGP++G V F G EYLL T Sbjct: 244 ALEDGALKTANGKTSLTGPVPSASGLAWRPRMVTLGSGPFQGTVRGTSFAGNSREYLLDT 303 Query: 302 ALGEVRGMAPAAQALAREGDTVRFDLPAQDALAL 335 LG ++ AA A GDT+ FDLP + A +L Sbjct: 304 PLGAIKAETDAALAAHAIGDTLAFDLPVEKAASL 337 >ref|ZP_08530698.1| ABC transporter, nucleotide binding/ATPase protein (spermidine/putrescine) [Agrobacterium sp. ATCC 31749] gb|EGL62612.1| ABC transporter, nucleotide binding/ATPase protein (spermidine/putrescine) [Agrobacterium sp. ATCC 31749] Length = 341 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 187/334 (55%), Positives = 252/334 (75%), Gaps = 1/334 (0%) Query: 2 SYLNLQQVALGYGNARTAVEGLNLAVQRGELISLLGPSGCGKTTTMRAIAGLIDLRAGTI 61 +YL+L +V+L YGN+ AV+ L+L +++GEL++LLGPSGCGKTTTMRAIAGL+ + G I Sbjct: 5 NYLSLNKVSLAYGNS-IAVKDLDLDIRKGELLALLGPSGCGKTTTMRAIAGLMPVAGGRI 63 Query: 62 TLDGRDISRLPPNKRDIGLVFQSYALFPHLNVFDNVAFGLRLRKVPAAELRQRVEKVIAA 121 LDG DI+R+ NKR +GLVFQSYALFPHL V++NVAFGL+L+ + L +V + + Sbjct: 64 DLDGADITRVAANKRAVGLVFQSYALFPHLTVYENVAFGLKLKGMSGKTLDDKVASGLKS 123 Query: 122 VGLAGFEARLPAQMSGGQQQRVALARAIVIEPKLLLLDEPLSNLDAKLRVQMRAELRRIQ 181 VGL+ F +R PA++SGGQQQRVALAR++V+EPK+LLLDEPLSNLDA+LR++MR EL+R+Q Sbjct: 124 VGLSNFASRKPAELSGGQQQRVALARSMVMEPKVLLLDEPLSNLDARLRLEMRTELQRVQ 183 Query: 182 RELGITMLYVTHDQDEALAMSDRIVVMNSGKIEQLDTPEQLFNAPRTRFVANFMGFENLF 241 +E G+TM++VTHDQ EALA++DRIVVM GKIEQ+ TPE+++NAP + FVA+F+GFEN+F Sbjct: 184 KETGVTMIFVTHDQIEALALADRIVVMKGGKIEQIGTPEEIYNAPVSSFVADFVGFENIF 243 Query: 242 DYRDGQLHGAAGQLPLSGLPANTACAGWRVQQVQVGSGPYEGRVLSRGFLGEHVEYLLQT 301 DG L A G+ L+G + + WR + V +GSGP++G V F G EYLL T Sbjct: 244 ALEDGALKTANGKTSLTGPVPSASGLAWRPRMVTLGSGPFQGTVRGTSFAGNSREYLLDT 303 Query: 302 ALGEVRGMAPAAQALAREGDTVRFDLPAQDALAL 335 LG ++ AA A GDT+ FDLP + A +L Sbjct: 304 PLGPIKAETDAALAAHAIGDTLAFDLPVEKAASL 337 >gb|EGP55963.1| ABC transporter, ATPase protein [Agrobacterium tumefaciens F2] Length = 341 Score = 367 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 187/334 (55%), Positives = 251/334 (75%), Gaps = 1/334 (0%) Query: 2 SYLNLQQVALGYGNARTAVEGLNLAVQRGELISLLGPSGCGKTTTMRAIAGLIDLRAGTI 61 +YL+LQ+V+L YGN+ AV+ L+L +++GEL++LLGPSGCGKTTTMRAIAGL+ + G I Sbjct: 5 NYLSLQKVSLAYGNS-IAVKDLDLDIRKGELLALLGPSGCGKTTTMRAIAGLMPVAGGRI 63 Query: 62 TLDGRDISRLPPNKRDIGLVFQSYALFPHLNVFDNVAFGLRLRKVPAAELRQRVEKVIAA 121 LDG DI+R+ NKR +GLVFQSYALFPHL V++NVAFGL+L+ + L +V + + Sbjct: 64 DLDGADITRVAANKRAVGLVFQSYALFPHLTVYENVAFGLKLKGMNGKALDDKVASGLKS 123 Query: 122 VGLAGFEARLPAQMSGGQQQRVALARAIVIEPKLLLLDEPLSNLDAKLRVQMRAELRRIQ 181 VGL+ F +R PA++SGGQQQRVALAR++V+EPK+LLLDEPLSNLDA+LR++MR EL+R+Q Sbjct: 124 VGLSNFASRKPAELSGGQQQRVALARSMVMEPKVLLLDEPLSNLDARLRLEMRTELQRVQ 183 Query: 182 RELGITMLYVTHDQDEALAMSDRIVVMNSGKIEQLDTPEQLFNAPRTRFVANFMGFENLF 241 +E G+TM++VTHDQ EALA++DRIVVM GKIEQ+ TPE ++NAP + FVA+F+GFEN+F Sbjct: 184 KETGVTMIFVTHDQIEALALADRIVVMKGGKIEQIGTPEDIYNAPVSSFVADFVGFENIF 243 Query: 242 DYRDGQLHGAAGQLPLSGLPANTACAGWRVQQVQVGSGPYEGRVLSRGFLGEHVEYLLQT 301 G L A G PL+G + + WR + V +GSGP++G V F G EYLL T Sbjct: 244 ALEGGALKTANGTTPLTGPVPSASGLAWRPRMVTLGSGPFQGTVRGTSFAGNTREYLLDT 303 Query: 302 ALGEVRGMAPAAQALAREGDTVRFDLPAQDALAL 335 LG ++ AA + GDT+ FDLP + A +L Sbjct: 304 PLGAIKAETDAALTVHTIGDTLAFDLPVEKAASL 337 >ref|YP_004444553.1| spermidine/putrescine ABC transporter, nucleotide binding/ATPase protein [Agrobacterium sp. H13-3] gb|ADY67462.1| spermidine/putrescine ABC transporter, nucleotide binding/ATPase protein [Agrobacterium sp. H13-3] Length = 341 Score = 361 bits (927), Expect = 9e-98, Method: Composition-based stats. Identities = 185/334 (55%), Positives = 249/334 (74%), Gaps = 1/334 (0%) Query: 2 SYLNLQQVALGYGNARTAVEGLNLAVQRGELISLLGPSGCGKTTTMRAIAGLIDLRAGTI 61 +YL+LQ+V+L YGN+ AV+ L+L +++GEL++LLGPSGCGKTTTMRAIAGL+ + G I Sbjct: 5 NYLSLQKVSLAYGNS-IAVKDLDLDIRKGELLALLGPSGCGKTTTMRAIAGLMPVAGGRI 63 Query: 62 TLDGRDISRLPPNKRDIGLVFQSYALFPHLNVFDNVAFGLRLRKVPAAELRQRVEKVIAA 121 LDG DI+R+ NKR +GLVFQSYALFPHL V++NVAFGL+L+ + L +V + + Sbjct: 64 DLDGADITRVAANKRAVGLVFQSYALFPHLTVYENVAFGLKLKGMNGKALDDKVASGLKS 123 Query: 122 VGLAGFEARLPAQMSGGQQQRVALARAIVIEPKLLLLDEPLSNLDAKLRVQMRAELRRIQ 181 VGL+ F +R PA++SGGQQQRVALAR++V+EPK+LLLDEPLSNLDA+LR++MR EL+R+Q Sbjct: 124 VGLSNFASRKPAELSGGQQQRVALARSMVMEPKVLLLDEPLSNLDARLRLEMRTELQRVQ 183 Query: 182 RELGITMLYVTHDQDEALAMSDRIVVMNSGKIEQLDTPEQLFNAPRTRFVANFMGFENLF 241 +E G+TM++VTHDQ EALA++DRIVVM GKIEQ+ TPE+++NAP + FVA+F+GFEN+F Sbjct: 184 KETGVTMIFVTHDQIEALALADRIVVMKGGKIEQIGTPEEIYNAPVSAFVADFVGFENIF 243 Query: 242 DYRDGQLHGAAGQLPLSGLPANTACAGWRVQQVQVGSGPYEGRVLSRGFLGEHVEYLLQT 301 G L G PL+G + + WR + V + SGP++G V F G EYLL T Sbjct: 244 ALEGGALKTENGTTPLTGPVPSASGLAWRPRMVTLDSGPFQGTVRGTSFAGNTREYLLDT 303 Query: 302 ALGEVRGMAPAAQALAREGDTVRFDLPAQDALAL 335 LG ++ AA GDT+ FDLP + A +L Sbjct: 304 LLGPIKAETDAALTAHTIGDTLAFDLPVEKAASL 337 >ref|YP_001979779.1| spermidine/putrescine ABC transporter ATP-binding protein [Rhizobium etli CIAT 652] gb|ACE92601.1| spermidine/putrescine ABC transporter, ATP-binding protein [Rhizobium etli CIAT 652] Length = 340 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 186/334 (55%), Positives = 247/334 (73%), Gaps = 1/334 (0%) Query: 2 SYLNLQQVALGYGNARTAVEGLNLAVQRGELISLLGPSGCGKTTTMRAIAGLIDLRAGTI 61 +YL L ++ L YG+ AV+ L+L++ +GEL++LLGPSGCGKTTTMRAIAGL+ +G I Sbjct: 4 AYLQLDKLTLAYGDT-VAVKDLDLSIGKGELVALLGPSGCGKTTTMRAIAGLLTPASGRI 62 Query: 62 TLDGRDISRLPPNKRDIGLVFQSYALFPHLNVFDNVAFGLRLRKVPAAELRQRVEKVIAA 121 LDG DI+R+ NKR +GLVFQSYALFPHL V++NVAFGLRL+ + A+L RV + + Sbjct: 63 RLDGADITRVSANKRAVGLVFQSYALFPHLTVYENVAFGLRLKDISGADLDARVGAGLKS 122 Query: 122 VGLAGFEARLPAQMSGGQQQRVALARAIVIEPKLLLLDEPLSNLDAKLRVQMRAELRRIQ 181 VGLA F R PA++SGGQQQRVALAR++V+EPK+LLLDEPLSNLDA+LR++MRAEL+R+Q Sbjct: 123 VGLAAFTGRKPAELSGGQQQRVALARSMVMEPKVLLLDEPLSNLDARLRLEMRAELQRVQ 182 Query: 182 RELGITMLYVTHDQDEALAMSDRIVVMNSGKIEQLDTPEQLFNAPRTRFVANFMGFENLF 241 +E G+TM++VTHDQ EALA++DRIVVM +G IEQ+ TPE+++N P + FVA+F+GFEN+F Sbjct: 183 KETGVTMIFVTHDQTEALALADRIVVMLNGAIEQIGTPEEIYNNPISAFVADFVGFENVF 242 Query: 242 DYRDGQLHGAAGQLPLSGLPANTACAGWRVQQVQVGSGPYEGRVLSRGFLGEHVEYLLQT 301 ++G+L G + L P TA WR + V +GSGP++G V F G EYLL T Sbjct: 243 ALKEGKLATPNGPVALPAPPPQTAGLAWRPRAVTLGSGPFQGTVRGTSFAGNSREYLLDT 302 Query: 302 ALGEVRGMAPAAQALAREGDTVRFDLPAQDALAL 335 LG ++ A+ G T+ FDLP DA L Sbjct: 303 PLGAIKAEIDASLPPYGIGSTLTFDLPVADAANL 336