BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3155.p (322 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002945540.1| PREDICTED: inosine-uridine preferring nucleo... 367 1e-99 ref|YP_003577870.1| pyrimidine-specific ribonucleoside hydrolase... 201 1e-49 ref|YP_769460.1| inosine-uridine preferring nucleoside hydrolase... 201 1e-49 ref|ZP_07713696.1| cytidine/uridine-specific hydrolase [Coryneba... 201 1e-49 ref|YP_002977235.1| Inosine/uridine-preferring nucleoside hydrol... 200 3e-49 >ref|XP_002945540.1| PREDICTED: inosine-uridine preferring nucleoside hydrolase-like [Xenopus (Silurana) tropicalis] Length = 314 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 185/320 (57%), Positives = 234/320 (73%), Gaps = 12/320 (3%) Query: 3 KIWLDTDPGFDDWLAMLMLSANLEVNWLGVSVVAGNAPLVTTYDNALRIKQHYQLDVPVY 62 KIWLDTDPGFDDW ML+L+ + + W+G+SVVAGNAP+ T++NA +I HY L P+Y Sbjct: 7 KIWLDTDPGFDDWFTMLVLAEDPALEWMGISVVAGNAPVAVTFENAGKICVHYHLQAPLY 66 Query: 63 AGCERPLAGAVETAQAILGESGMATTGEALPQVDIADLEARQSRQLQRDPLPHAVDAMIE 122 GC+RPL +ETA+ ILG GM TTGE LP A + HAVDA+I Sbjct: 67 RGCDRPLKARLETAERILGAQGMRTTGEILPPAFPALHDQ------------HAVDALIA 114 Query: 123 AIRLHAGEITLMCIAPLTNVAVALQRAPEIAGMVKEIILMGGSADQGNHTAAAEFNIYAD 182 A+R H GEI+++ +AP+TN+A ALQ+AP+I+ + EII+MGGS D+GNHTAAAEFN+YAD Sbjct: 115 AVRRHPGEISVVALAPMTNLASALQKAPDISTKIPEIIMMGGSTDRGNHTAAAEFNVYAD 174 Query: 183 PEAADVVFRSGIPLRMFGLNLCRQLLVTAAEVQQVRALGTPRAKWLAGYFDAYLRIRSPD 242 PEAAD+VF +GIPLRM GLNLCRQ+++T +E+ QV+AL TPRA+W AGY DAYL IRS D Sbjct: 175 PEAADIVFNAGIPLRMLGLNLCRQIVITKSELLQVQALHTPRAQWFAGYLDAYLCIRSSD 234 Query: 243 GSVPMPMYDPAVAIWLKRPELFSFQPARVDIELQGRLTRGMTVCEFRVPRRAPANTEVAM 302 GS PMP+YDP VA +L RP+ F F PA VDIEL GR TRGMTVCEFR P + A +VA Sbjct: 235 GSEPMPLYDPVVAAYLARPQDFEFAPAPVDIELDGRWTRGMTVCEFRRPDQNGAQVQVAT 294 Query: 303 TVDGPRAMQCMMQELHGSLS 322 +D A+ +M+ L G L+ Sbjct: 295 RIDAEAALPALMRRLMGRLA 314 >ref|YP_003577870.1| pyrimidine-specific ribonucleoside hydrolase RihA [Rhodobacter capsulatus SB 1003] gb|ADE85463.1| pyrimidine-specific ribonucleoside hydrolase RihA [Rhodobacter capsulatus SB 1003] Length = 311 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 129/298 (43%), Positives = 182/298 (61%), Gaps = 19/298 (6%) Query: 3 KIWLDTDPGFDDWLAMLMLSANLEVNWLGVSVVAGNAPLVTTYDNA-LRIKQHYQLDVPV 61 KI +DTDPG DD +A+L+ A+ E+ LG++ VAGN PL T NA + + + DV + Sbjct: 4 KIIIDTDPGQDDAVAILLALASPELEVLGITCVAGNVPLALTTKNARIVCELAGRRDVKI 63 Query: 62 YAGCERPLAGAVETAQAILGESGMATTGEALPQVDIADLEARQSRQLQRDPLPHAVDAMI 121 +AGC+RPL + TA+ + G++G+ G ALP+ +A L+ R HAVD +I Sbjct: 64 FAGCDRPLLRPLVTAEYVHGKTGL--DGIALPEPTMA-LQDR-----------HAVDFLI 109 Query: 122 EAIRLHA-GEITLMCIAPLTNVAVALQRAPEIAGMVKEIILMGGSA-DQGNHTAAAEFNI 179 E +R A G +TL + PLTN+A A +RAPEI V+ I+LMGG+ + GN T AAEFNI Sbjct: 110 ETLRAEAPGTVTLCPLGPLTNIATAFRRAPEIVSKVERIVLMGGAYFEVGNTTPAAEFNI 169 Query: 180 YADPEAADVVFRSGIPLRMFGLNLCRQLLVTAAEVQQVRALGTPRAKWLAGYFDAYLRI- 238 Y DP+AA++VF+SG+PL + L+ + L T + RAL TP +A + D + R Sbjct: 170 YVDPQAAEIVFKSGVPLVVVPLDATHKALTTRPRIAAFRALNTPVGAAVASWTDFFERFD 229 Query: 239 RSPDGSVPMPMYDPAVAIWLKRPELFSFQPARVDIELQGRLTRGMTVCE-FRVPRRAP 295 R+ GS P++DP V WL RP+LF + V+IE Q LT GMTV + +RV R P Sbjct: 230 RAKYGSEGAPLHDPCVIAWLLRPDLFEGRFINVEIETQSELTMGMTVADWWRVTPREP 287 >ref|YP_769460.1| inosine-uridine preferring nucleoside hydrolase [Rhizobium leguminosarum bv. viciae 3841] emb|CAK09372.1| putative inosine-uridine preferring nucleoside hydrolase [Rhizobium leguminosarum bv. viciae 3841] Length = 319 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 122/317 (38%), Positives = 177/317 (55%), Gaps = 22/317 (6%) Query: 4 IWLDTDPGFDDWLAMLMLSANLEVNWLGVSVVAGNAPLVTTYDNALRIKQHYQLDVPVYA 63 +W+DTD GFDD A+LM+ + E G+S+V GN PL NA + P++ Sbjct: 16 VWIDTDMGFDDIAAILMVGQS-EFEIDGISLVFGNTPLPQVRINAAGAASAFGWTFPIHT 74 Query: 64 GCERPLAGAVETAQAILGESGMATTGEALP-QVDIADLEARQS--RQLQRDPLPHAVDAM 120 G P+ G +ETAQAILGE+G+ T+G +LP D+A+ +A + R L+R Sbjct: 75 GRAMPVLGKLETAQAILGETGIPTSGRSLPPAADLAESDAFTALCRWLERK--------- 125 Query: 121 IEAIRLHAGEITLMCIAPLTNVAVALQRAPEIAGMVKEIILMGGSADQGNHTAAAEFNIY 180 G+ ++ + PLTN+A P++A + E++ MGG GNHTA+AEFN Sbjct: 126 --------GQHRILALGPLTNIAAVALARPDLAARITELVWMGGGVTSGNHTASAEFNAL 177 Query: 181 ADPEAADVVFRSGIPLRMFGLNLCRQLLVTAAEVQQVRALGTPRAKWLAGYFDAYLRIRS 240 ADPEA +V G+PLRM L+LCR++L + + VR G A+ +A F Y+RI + Sbjct: 178 ADPEALSIVIAHGLPLRMVDLDLCRKVLARPEDAEPVRNAGGANAELIADMFSGYIRIGT 237 Query: 241 PDGSVPMPMYDPAVAIWLKRPELFSFQPARVDIELQGRLTRGMTVCEFRVPRRAPANTEV 300 G M +YDP+ A+ P++ SF+PAR+D+ELQG LTRG TV E R A N + Sbjct: 238 SRGRPAMAIYDPSAAVAFVAPDIVSFRPARIDVELQGALTRGRTVVETRAT-HATFNAQF 296 Query: 301 AMTVDGPRAMQCMMQEL 317 A +D A ++ L Sbjct: 297 AADIDADMARVIILAAL 313 >ref|ZP_07713696.1| cytidine/uridine-specific hydrolase [Corynebacterium pseudogenitalium ATCC 33035] gb|EFQ81004.1| cytidine/uridine-specific hydrolase [Corynebacterium pseudogenitalium ATCC 33035] Length = 313 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 123/306 (40%), Positives = 175/306 (57%), Gaps = 15/306 (4%) Query: 3 KIWLDTDPGFDDWLAMLMLSANLEVNWLGVSVVAGNAPLVTTYDNALRIKQ-HYQLDVPV 61 KI LD DPG DD +A+L+ N ++ LG++ V GN L NAL +K+ +VPV Sbjct: 4 KIILDCDPGHDDAVALLLALGNPAIDLLGITTVGGNQTLDKVSHNALVVKEIAGHPEVPV 63 Query: 62 YAGCERPLAGAVETAQAILGESGMATTGEALPQVDIADLEARQSRQLQRDPLPHAVDAMI 121 YAGC+RPL VE A+AI G +GM G LP+ A +A HA+D +I Sbjct: 64 YAGCDRPLVRPVEVAEAIHGSTGMDVEGVQLPEPSTALADA------------HAIDFII 111 Query: 122 EAIRLH-AGEITLMCIAPLTNVAVALQRAPEIAGMVKEIILMGGSADQGNHTAAAEFNIY 180 + + H G ITL+ PLTNVA+A ++ P I VKE++LMGG +GN + AEFNI Sbjct: 112 DTVMSHEPGTITLVPTGPLTNVAMAARKEPRIVERVKEVVLMGGGYHEGNWSPVAEFNIK 171 Query: 181 ADPEAADVVFRSGIPLRMFGLNLCRQLLVTAAEVQQVRALGTPRAKWLAGYFDAYLRI-R 239 DPEAA +VF P+ M GL+L Q L T +++AL TP ++++ G F + + + Sbjct: 172 IDPEAAHIVFEEPWPVTMVGLDLTHQALATPEVEAEIKALNTPVSEFVVGLFGFFRKAYQ 231 Query: 240 SPDGSVPMPMYDPAVAIWLKRPELFSFQPARVDIELQGRLTRGMTVCEFRVPRRAPANTE 299 + G P++DP +L P++ + A V +EL G LT GMTV + R P A +T+ Sbjct: 232 ANQGFDNPPVHDPCTIAYLIDPDIVQTRKAPVHVELAGALTTGMTVTDLREPADASCHTQ 291 Query: 300 VAMTVD 305 VA T+D Sbjct: 292 VATTLD 297 >ref|YP_002977235.1| Inosine/uridine-preferring nucleoside hydrolase [Rhizobium leguminosarum bv. trifolii WSM1325] gb|ACS57696.1| Inosine/uridine-preferring nucleoside hydrolase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 306 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 120/317 (37%), Positives = 172/317 (54%), Gaps = 22/317 (6%) Query: 4 IWLDTDPGFDDWLAMLMLSANLEVNWLGVSVVAGNAPLVTTYDNALRIKQHYQLDVPVYA 63 +W+DTD GFDD +A +M+ A E G+S+V GN PL NA + P++ Sbjct: 3 VWIDTDMGFDD-IAAIMVVAQSEFEIDGLSLVFGNTPLAQVRINAAGAASAFGWKFPIHT 61 Query: 64 GCERPLAGAVETAQAILGESGMATTGEALPQVDI---ADLEARQSRQLQRDPLPHAVDAM 120 G P+ G +ETAQAILGE+G+ T G +LP+ +D A R L+R Sbjct: 62 GRATPVLGKLETAQAILGETGIPTLGRSLPKAPALAESDAFAALCRWLERQ--------- 112 Query: 121 IEAIRLHAGEITLMCIAPLTNVAVALQRAPEIAGMVKEIILMGGSADQGNHTAAAEFNIY 180 GE ++ + PLTN+A P++A + E++ MGG GNHTA+AEFN Sbjct: 113 --------GEHRILALGPLTNIAAVALARPDLAARITELVWMGGGVTSGNHTASAEFNAL 164 Query: 181 ADPEAADVVFRSGIPLRMFGLNLCRQLLVTAAEVQQVRALGTPRAKWLAGYFDAYLRIRS 240 ADPEA ++ G+PLRM L+LCR++L + + VR G A+ +A F Y+RI + Sbjct: 165 ADPEALSIIIAHGLPLRMVDLDLCRKVLARPEDAEPVRNAGGANAELIADMFSGYIRIGT 224 Query: 241 PDGSVPMPMYDPAVAIWLKRPELFSFQPARVDIELQGRLTRGMTVCEFRVPRRAPANTEV 300 G M +YDP A+ P++ +F+PAR+D+ELQG LTRG TV E R A N + Sbjct: 225 SRGRPAMAIYDPCAAVAFVAPDIVNFRPARIDVELQGALTRGRTVVETRAT-HATFNAQF 283 Query: 301 AMTVDGPRAMQCMMQEL 317 A +D A ++ L Sbjct: 284 AADIDADMARVIILAAL 300