BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3151.p (427 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775846.1| Bcr/CflA family drug resistance transporter ... 632 e-179 ref|ZP_03582870.1| major facilitator superfamily MFS_1 [Burkhold... 553 e-155 ref|YP_559182.1| major facilitator superfamily drug efflux prote... 550 e-154 ref|YP_623673.1| major facilitator transporter [Burkholderia cen... 548 e-154 ref|YP_002234353.1| major facilitator superfamily protein [Burkh... 548 e-154 >ref|YP_003775846.1| Bcr/CflA family drug resistance transporter protein [Herbaspirillum seropedicae SmR1] gb|ADJ63938.1| Bcr/CflA family drug resistance transporter protein [Herbaspirillum seropedicae SmR1] Length = 417 Score = 632 bits (1631), Expect = e-179, Method: Composition-based stats. Identities = 360/405 (88%), Positives = 377/405 (93%) Query: 19 RHPPNHPKFLLFLICAFASAGQLAIDLYVPALPQMAIDYGTSAQAIQTSVTGYLIAYAFG 78 +HPPNHP+FLLFLICAFASAGQLAIDLYVPALP+MAIDY TSAQAIQ+SVTGYLIAYAFG Sbjct: 13 QHPPNHPRFLLFLICAFASAGQLAIDLYVPALPEMAIDYATSAQAIQSSVTGYLIAYAFG 72 Query: 79 QLAFGPLADAWGRRRVLMLGLGLFTLGCVLTLLAPNLETFVAARVLQGFGIAATNLLAKA 138 QL FGPLADA+GR+R+L LGLGLF+LGCVL+L APNLETFVAARVLQGFGIAATNLLAKA Sbjct: 73 QLVFGPLADAYGRKRILALGLGLFSLGCVLSLAAPNLETFVAARVLQGFGIAATNLLAKA 132 Query: 139 IITDSFVGQTLVHAYTYMAIAWGLAPIIAPVIGAHLQEAFGWRSCLVFLLLYSFAMWAIL 198 IITDSF GQ LVHAYTYMAIAWGLAPIIAPVIGAHLQEAFGWRSCLVFLL+YS MWA+L Sbjct: 133 IITDSFAGQALVHAYTYMAIAWGLAPIIAPVIGAHLQEAFGWRSCLVFLLVYSLGMWAVL 192 Query: 199 WRYRETLAEPVHLHPATLLKNARMVLASPVFQSCFLAQGLCYSILLVFNIVGPFMVQNTL 258 WRYRETLA+PV LHPATL +NARMVLASPVFQSCFLAQGLCYSILLVFNIVGPFMVQNTL Sbjct: 193 WRYRETLAQPVRLHPATLARNARMVLASPVFQSCFLAQGLCYSILLVFNIVGPFMVQNTL 252 Query: 259 RQPPTFFGYLALAIGMMYFLGGISNRIHHRRLPSAEQRLRIGARVMTAAAFAMLALALLV 318 QPPTFFGYLALAIGMMYFLGGISNRI HRRLP+AEQRLR+GARVMT AAF ML LAL V Sbjct: 253 HQPPTFFGYLALAIGMMYFLGGISNRITHRRLPTAEQRLRLGARVMTGAAFVMLLLALSV 312 Query: 319 GLTVWTLITPVLVMAFCAGAMYPTLMAKGNSIFPHIAGLTSAILGFALLLVSSGMMGLAG 378 GLTVWTL PVLVMAFCAGAMYPTLMAKGNSIFPHIAGLTSAILGFALLLVS+ MMGLAG Sbjct: 313 GLTVWTLCAPVLVMAFCAGAMYPTLMAKGNSIFPHIAGLTSAILGFALLLVSAAMMGLAG 372 Query: 379 FVSIHSLTPLAVFFCIVGLTVIAMVGKLLQHLQVPAAAATLQVRP 423 FVSIHSLTPLA FFC+VGLTVI MVGKLL HLQVPA A RP Sbjct: 373 FVSIHSLTPLAGFFCVVGLTVIVMVGKLLHHLQVPAPLAQPVARP 417 >ref|ZP_03582870.1| major facilitator superfamily MFS_1 [Burkholderia multivorans CGD1] gb|EEE03043.1| major facilitator superfamily MFS_1 [Burkholderia multivorans CGD1] Length = 472 Score = 553 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 311/414 (75%), Positives = 346/414 (83%), Gaps = 5/414 (1%) Query: 4 PLSMNPVSPATRPVPRHPPNHPKFLLFLICAFASAGQLAIDLYVPALPQMAIDYGTSAQA 63 P+ MNP + R N P+FLLFLIC FASAGQLAID+YVPALP MA + T+ QA Sbjct: 55 PVVMNPTLASARE-----SNSPRFLLFLICLFASAGQLAIDIYVPALPDMARSFATTPQA 109 Query: 64 IQTSVTGYLIAYAFGQLAFGPLADAWGRRRVLMLGLGLFTLGCVLTLLAPNLETFVAARV 123 IQ+SV+GY+ AYA GQL FGP+ADA+GR+RVL GL ++T+GC+L+L APNLETFV AR Sbjct: 110 IQSSVSGYMAAYALGQLIFGPIADAYGRKRVLAFGLVIYTIGCLLSLGAPNLETFVLARC 169 Query: 124 LQGFGIAATNLLAKAIITDSFVGQTLVHAYTYMAIAWGLAPIIAPVIGAHLQEAFGWRSC 183 LQGFGIA TNLLAKAIITDSF GQ L+HA+TYM+IAWGLAPIIAPVIGAHLQ FGWR+C Sbjct: 170 LQGFGIATTNLLAKAIITDSFSGQALMHAFTYMSIAWGLAPIIAPVIGAHLQTWFGWRAC 229 Query: 184 LVFLLLYSFAMWAILWRYRETLAEPVHLHPATLLKNARMVLASPVFQSCFLAQGLCYSIL 243 LVFLL+YS MWA+LWRYRETL +PVHL P TL+ NA VLASPVFQSCFLAQGLCYSIL Sbjct: 230 LVFLLVYSLVMWALLWRYRETLPKPVHLEPRTLIANAGKVLASPVFQSCFLAQGLCYSIL 289 Query: 244 LVFNIVGPFMVQNTLRQPPTFFGYLALAIGMMYFLGGISNRIHHRRLPSAEQRLRIGARV 303 LVFNIVGPFMVQNTL QPPTFFGYLAL IG+MYFLGG+SNRIH R LPSAEQRLRIGARV Sbjct: 290 LVFNIVGPFMVQNTLHQPPTFFGYLALGIGLMYFLGGLSNRIHGRGLPSAEQRLRIGARV 349 Query: 304 MTAAAFAMLALALLVGLTVWTLITPVLVMAFCAGAMYPTLMAKGNSIFPHIAGLTSAILG 363 M AA AML LAL VGL VWTL TPVLVM FCAGAMYPTLMAKGNS+FPHIAGLTSAILG Sbjct: 350 MACAAVAMLVLALTVGLRVWTLATPVLVMGFCAGAMYPTLMAKGNSLFPHIAGLTSAILG 409 Query: 364 FALLLVSSGMMGLAGFVSIHSLTPLAVFFCIVGLTVIAMVGKLLQHLQVPAAAA 417 ALLLVSS MMGLAGFVS+ LTPLA+FF + V+ MV KLL++L AA+ Sbjct: 410 CALLLVSSAMMGLAGFVSVQVLTPLALFFVALSFVVVWMVTKLLRYLTQQQAAS 463 >ref|YP_559182.1| major facilitator superfamily drug efflux protein [Burkholderia xenovorans LB400] gb|ABE31130.1| Major facilitator family (MFS) drug efflux pump, Bcr/CflA family [Burkholderia xenovorans LB400] Length = 420 Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats. Identities = 308/397 (77%), Positives = 343/397 (86%) Query: 21 PPNHPKFLLFLICAFASAGQLAIDLYVPALPQMAIDYGTSAQAIQTSVTGYLIAYAFGQL 80 PPN P+FLLFLIC FASAGQLAID+YVPALP MA + TS QAIQ+SV+GY++AYA GQL Sbjct: 15 PPNSPRFLLFLICLFASAGQLAIDIYVPALPAMAHFFATSPQAIQSSVSGYMVAYALGQL 74 Query: 81 AFGPLADAWGRRRVLMLGLGLFTLGCVLTLLAPNLETFVAARVLQGFGIAATNLLAKAII 140 FGP+ADA+GR+RVL GL ++TLGC+L+L+A NLETFV AR LQGFGIA TNLLAKAII Sbjct: 75 VFGPVADAYGRKRVLAFGLVIYTLGCLLSLVASNLETFVLARCLQGFGIATTNLLAKAII 134 Query: 141 TDSFVGQTLVHAYTYMAIAWGLAPIIAPVIGAHLQEAFGWRSCLVFLLLYSFAMWAILWR 200 TDSF GQ LVHA+TYM+IAWGLAPI+APVIGAHLQ FGW++CLVFLL+YS MW +LWR Sbjct: 135 TDSFAGQALVHAFTYMSIAWGLAPIVAPVIGAHLQTWFGWQACLVFLLVYSLVMWGLLWR 194 Query: 201 YRETLAEPVHLHPATLLKNARMVLASPVFQSCFLAQGLCYSILLVFNIVGPFMVQNTLRQ 260 YRETL +PVHL P TL+ NA VL+SPVFQSCFLAQGLCYSILLVFNIVGPFMVQNTL + Sbjct: 195 YRETLVQPVHLAPRTLMANAGKVLSSPVFQSCFLAQGLCYSILLVFNIVGPFMVQNTLHK 254 Query: 261 PPTFFGYLALAIGMMYFLGGISNRIHHRRLPSAEQRLRIGARVMTAAAFAMLALALLVGL 320 PPTFFGYLAL IG MYFLGG+SNR+H RLP AEQRLRIGARVM AA+ AML LAL VGL Sbjct: 255 PPTFFGYLALGIGAMYFLGGLSNRVHGARLPDAEQRLRIGARVMAAASIAMLVLALTVGL 314 Query: 321 TVWTLITPVLVMAFCAGAMYPTLMAKGNSIFPHIAGLTSAILGFALLLVSSGMMGLAGFV 380 VWTL PVLVM FCAGAMYPTLMAKGNS+FPHIAGLTSAILG ALLLVSS MMGLAGFV Sbjct: 315 RVWTLALPVLVMGFCAGAMYPTLMAKGNSLFPHIAGLTSAILGCALLLVSSAMMGLAGFV 374 Query: 381 SIHSLTPLAVFFCIVGLTVIAMVGKLLQHLQVPAAAA 417 S+ LT LAVFF I+ LTV+AMV KLL+HL P +AA Sbjct: 375 SVQELTSLAVFFVILALTVVAMVTKLLRHLAQPQSAA 411 >ref|YP_623673.1| major facilitator transporter [Burkholderia cenocepacia AU 1054] ref|YP_838187.1| major facilitator transporter [Burkholderia cenocepacia HI2424] ref|YP_001779356.1| major facilitator transporter [Burkholderia cenocepacia MC0-3] ref|ZP_04941572.1| Major facilitator superfamily transporter [Burkholderia cenocepacia PC184] gb|ABF78700.1| major facilitator superfamily MFS_1 [Burkholderia cenocepacia AU 1054] gb|ABK11294.1| major facilitator superfamily MFS_1 [Burkholderia cenocepacia HI2424] gb|EAY64743.1| Major facilitator superfamily transporter [Burkholderia cenocepacia PC184] gb|ACA94866.1| major facilitator superfamily MFS_1 [Burkholderia cenocepacia MC0-3] Length = 415 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 309/399 (77%), Positives = 341/399 (85%) Query: 18 PRHPPNHPKFLLFLICAFASAGQLAIDLYVPALPQMAIDYGTSAQAIQTSVTGYLIAYAF 77 P N P+FLLFLIC FASAGQLAID+YVPALP MA + T+ QAIQ+SV+GY+ AYA Sbjct: 7 PARESNSPRFLLFLICLFASAGQLAIDIYVPALPDMARSFATTPQAIQSSVSGYMAAYAL 66 Query: 78 GQLAFGPLADAWGRRRVLMLGLGLFTLGCVLTLLAPNLETFVAARVLQGFGIAATNLLAK 137 GQL FGP+ADA+GR+RVL GL ++T+GC+L+L APNLETFV AR LQGFGIA TNLLAK Sbjct: 67 GQLIFGPIADAYGRKRVLAFGLVIYTIGCLLSLGAPNLETFVLARCLQGFGIATTNLLAK 126 Query: 138 AIITDSFVGQTLVHAYTYMAIAWGLAPIIAPVIGAHLQEAFGWRSCLVFLLLYSFAMWAI 197 AIITDSF GQ L+HA+TYM+IAWGLAPIIAPVIGAHLQE FGWR+CLVFLL+YS AMWA+ Sbjct: 127 AIITDSFSGQALMHAFTYMSIAWGLAPIIAPVIGAHLQEWFGWRACLVFLLVYSLAMWAL 186 Query: 198 LWRYRETLAEPVHLHPATLLKNARMVLASPVFQSCFLAQGLCYSILLVFNIVGPFMVQNT 257 LWRYRETL +PVHL P TL+ NA VLASPVFQSCFLAQGLCYSILLVFNIVGPFMVQ T Sbjct: 187 LWRYRETLPKPVHLEPRTLMANAGKVLASPVFQSCFLAQGLCYSILLVFNIVGPFMVQTT 246 Query: 258 LRQPPTFFGYLALAIGMMYFLGGISNRIHHRRLPSAEQRLRIGARVMTAAAFAMLALALL 317 L +PPTFFGYLAL IG+MYFLGG+SNRIH R LPSAEQRLRIGARVM A+ AML LAL Sbjct: 247 LHKPPTFFGYLALGIGLMYFLGGLSNRIHGRGLPSAEQRLRIGARVMAGASVAMLVLALT 306 Query: 318 VGLTVWTLITPVLVMAFCAGAMYPTLMAKGNSIFPHIAGLTSAILGFALLLVSSGMMGLA 377 VGL VWTL TPVLVM FCAGAMYPTLMAKGNS+FPHIAGLTSAILG ALLLVSS MMGLA Sbjct: 307 VGLRVWTLATPVLVMGFCAGAMYPTLMAKGNSLFPHIAGLTSAILGCALLLVSSAMMGLA 366 Query: 378 GFVSIHSLTPLAVFFCIVGLTVIAMVGKLLQHLQVPAAA 416 GFVSIH LTPLAVFF + V+ MV KLL++L AA Sbjct: 367 GFVSIHVLTPLAVFFVALSFIVVWMVTKLLRYLSRQQAA 405 >ref|YP_002234353.1| major facilitator superfamily protein [Burkholderia cenocepacia J2315] emb|CAR55598.1| Major Facilitator Superfamily protein [Burkholderia cenocepacia J2315] Length = 415 Score = 548 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 309/399 (77%), Positives = 341/399 (85%) Query: 18 PRHPPNHPKFLLFLICAFASAGQLAIDLYVPALPQMAIDYGTSAQAIQTSVTGYLIAYAF 77 P N P+FLLFLIC FASAGQLAID+YVPALP MA + T+ QAIQ+SV+GY+ AYA Sbjct: 7 PARESNSPRFLLFLICLFASAGQLAIDIYVPALPDMARSFATTPQAIQSSVSGYMAAYAL 66 Query: 78 GQLAFGPLADAWGRRRVLMLGLGLFTLGCVLTLLAPNLETFVAARVLQGFGIAATNLLAK 137 GQL FGP+ADA+GR+RVL GL ++T+GC+L+L APNLETFV AR LQGFGIA TNLLAK Sbjct: 67 GQLIFGPIADAYGRKRVLAFGLVIYTIGCLLSLGAPNLETFVLARCLQGFGIATTNLLAK 126 Query: 138 AIITDSFVGQTLVHAYTYMAIAWGLAPIIAPVIGAHLQEAFGWRSCLVFLLLYSFAMWAI 197 AIITDSF GQ L+HA+TYM+IAWGLAPIIAPVIGAHLQE FGWR+CLVFLL+YS AMWA+ Sbjct: 127 AIITDSFSGQALMHAFTYMSIAWGLAPIIAPVIGAHLQEWFGWRACLVFLLVYSLAMWAL 186 Query: 198 LWRYRETLAEPVHLHPATLLKNARMVLASPVFQSCFLAQGLCYSILLVFNIVGPFMVQNT 257 LWRYRETL +PVHL P TL+ NA VLASPVFQSCFLAQGLCYSILLVFNIVGPFMVQ T Sbjct: 187 LWRYRETLPKPVHLEPRTLMANAGKVLASPVFQSCFLAQGLCYSILLVFNIVGPFMVQTT 246 Query: 258 LRQPPTFFGYLALAIGMMYFLGGISNRIHHRRLPSAEQRLRIGARVMTAAAFAMLALALL 317 L +PPTFFGYLAL IG+MYFLGG+SNRIH R LPSAEQRLRIGARVM A+ AML LAL Sbjct: 247 LHKPPTFFGYLALGIGLMYFLGGLSNRIHGRGLPSAEQRLRIGARVMAGASVAMLVLALT 306 Query: 318 VGLTVWTLITPVLVMAFCAGAMYPTLMAKGNSIFPHIAGLTSAILGFALLLVSSGMMGLA 377 VGL VWTL TPVLVM FCAGAMYPTLMAKGNS+FPHIAGLTSAILG ALLLVSS MMGLA Sbjct: 307 VGLRVWTLATPVLVMGFCAGAMYPTLMAKGNSLFPHIAGLTSAILGCALLLVSSAMMGLA 366 Query: 378 GFVSIHSLTPLAVFFCIVGLTVIAMVGKLLQHLQVPAAA 416 GFVSIH LTPLAVFF + V+ MV KLL++L AA Sbjct: 367 GFVSIHVLTPLAVFFVALSFIVVWMVTKLLRYLSQQQAA 405