BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3142.p (336 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775854.1| biotin synthase [Herbaspirillum seropedicae ... 525 e-147 ref|YP_548417.1| biotin synthase [Polaromonas sp. JS666] >gi|916... 416 e-114 sp|Q12D73|BIOB2_POLSJ RecName: Full=Biotin synthase 2 416 e-114 ref|YP_001792663.1| biotin synthase [Leptothrix cholodnii SP-6] ... 415 e-114 ref|ZP_03584027.1| biotin synthase [Burkholderia multivorans CGD... 412 e-113 >ref|YP_003775854.1| biotin synthase [Herbaspirillum seropedicae SmR1] gb|ADJ63946.1| biotin synthase protein [Herbaspirillum seropedicae SmR1] Length = 347 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 292/347 (84%), Positives = 312/347 (89%), Gaps = 11/347 (3%) Query: 1 MSQCPSPAAAQASATLHFHRPLAAIDSS-----------AAEQLFELPFLDLLYRAQTVH 49 MS CPS A Q SA LHFHRP A +++ A LFELPFLDLLY+AQTVH Sbjct: 1 MSHCPSAPAGQTSAPLHFHRPANAANAAHSTRADDARRDAVAALFELPFLDLLYQAQTVH 60 Query: 50 RQHHRANEVQLSSLLSIKTGGCAEDCGYCSQSAHHQDAGVPASKLMAVDDVVQAAQAARA 109 RQHH AN+VQLSSLLSIKTGGCAEDCGYC+QSAHH++AGVPA KLMAVD+VVQAA+AAR Sbjct: 61 RQHHPANQVQLSSLLSIKTGGCAEDCGYCAQSAHHKEAGVPAGKLMAVDEVVQAARAARD 120 Query: 110 QGATRFCMGAAWRNPKQRDMAALTEMVSQVRALGLETCMTLGMLEQAQAEALKQAGLDYY 169 QGATRFCMGAAWRNPK+RDM ALTEMVSQVRALGLETCMTLGMLEQAQAEALK+AGLDYY Sbjct: 121 QGATRFCMGAAWRNPKERDMPALTEMVSQVRALGLETCMTLGMLEQAQAEALKEAGLDYY 180 Query: 170 NHNLDTAPDFYGQVISTRSYQDRLDTLQRVQEAGLNVCCGGIIGMGETRAQRAGLIAQLA 229 NHNLDTAPDFYGQVISTRSYQDRLDTL+RV AGL+VCCGGIIGMGE+RAQRAGLIAQLA Sbjct: 181 NHNLDTAPDFYGQVISTRSYQDRLDTLERVHLAGLSVCCGGIIGMGESRAQRAGLIAQLA 240 Query: 230 SLPVPPQSVPINHLVPIAGTPLQDVAPLDEFEFVRTVAVARIALPQAVIRLSAGRESMSE 289 +LPVPPQSVPINHLVPIAGTPLQDV LDEFEFVRTVAVARIALP AVIRLSAGRESMS+ Sbjct: 241 ALPVPPQSVPINHLVPIAGTPLQDVPALDEFEFVRTVAVARIALPHAVIRLSAGRESMSD 300 Query: 290 ATQALCFAAGANSIFLGAKLLTTANAPVSADLDLLQRLGLQAAAAAA 336 ATQALCFAAGANSIFLG+KLLTT NAPVS+DLDLL RLGLQA AA+A Sbjct: 301 ATQALCFAAGANSIFLGSKLLTTPNAPVSSDLDLLARLGLQATAASA 347 >ref|YP_548417.1| biotin synthase [Polaromonas sp. JS666] gb|ABE43519.1| biotin synthase [Polaromonas sp. JS666] Length = 344 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 213/302 (70%), Positives = 254/302 (84%), Gaps = 1/302 (0%) Query: 33 LFELPFLDLLYRAQTVHRQHHRANEVQLSSLLSIKTGGCAEDCGYCSQSAHHQDAGVPAS 92 L+ELPF+DLL+RAQ VHR+H ANEVQLS+LLSIKTGGCAEDCGYC QS H + V AS Sbjct: 36 LYELPFMDLLFRAQQVHREHFDANEVQLSTLLSIKTGGCAEDCGYCPQSTHFETE-VKAS 94 Query: 93 KLMAVDDVVQAAQAARAQGATRFCMGAAWRNPKQRDMAALTEMVSQVRALGLETCMTLGM 152 KLM + +V++AA+AA+ QGATRFCMGAAWR+PK+RDM +TE+V +VR+LGLETCMTLGM Sbjct: 95 KLMPLAEVIEAARAAKDQGATRFCMGAAWRSPKERDMERVTEIVREVRSLGLETCMTLGM 154 Query: 153 LEQAQAEALKQAGLDYYNHNLDTAPDFYGQVISTRSYQDRLDTLQRVQEAGLNVCCGGII 212 L+ QA+ALK AGLDYYNHNLD+AP+FYG +ISTR+YQDRLDTL V++AG+NVCCGGI+ Sbjct: 155 LQAEQAQALKDAGLDYYNHNLDSAPEFYGDIISTRTYQDRLDTLGHVRQAGINVCCGGIV 214 Query: 213 GMGETRAQRAGLIAQLASLPVPPQSVPINHLVPIAGTPLQDVAPLDEFEFVRTVAVARIA 272 GMGE+R QRAGLIAQLA+L P+SVPIN+LVP+AGTPL + APLD FEFVRT+AVARI Sbjct: 215 GMGESRLQRAGLIAQLANLSPYPESVPINNLVPVAGTPLANTAPLDPFEFVRTIAVARIT 274 Query: 273 LPQAVIRLSAGRESMSEATQALCFAAGANSIFLGAKLLTTANAPVSADLDLLQRLGLQAA 332 +P ++RLSAGRE M EA QALCFAAGANSIF G KLLTT+N D L +RLGL+ Sbjct: 275 MPLTMVRLSAGREQMDEALQALCFAAGANSIFYGDKLLTTSNPQADRDRQLFERLGLKTQ 334 Query: 333 AA 334 A Sbjct: 335 GA 336 >sp|Q12D73|BIOB2_POLSJ RecName: Full=Biotin synthase 2 Length = 343 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 213/302 (70%), Positives = 254/302 (84%), Gaps = 1/302 (0%) Query: 33 LFELPFLDLLYRAQTVHRQHHRANEVQLSSLLSIKTGGCAEDCGYCSQSAHHQDAGVPAS 92 L+ELPF+DLL+RAQ VHR+H ANEVQLS+LLSIKTGGCAEDCGYC QS H + V AS Sbjct: 35 LYELPFMDLLFRAQQVHREHFDANEVQLSTLLSIKTGGCAEDCGYCPQSTHFETE-VKAS 93 Query: 93 KLMAVDDVVQAAQAARAQGATRFCMGAAWRNPKQRDMAALTEMVSQVRALGLETCMTLGM 152 KLM + +V++AA+AA+ QGATRFCMGAAWR+PK+RDM +TE+V +VR+LGLETCMTLGM Sbjct: 94 KLMPLAEVIEAARAAKDQGATRFCMGAAWRSPKERDMERVTEIVREVRSLGLETCMTLGM 153 Query: 153 LEQAQAEALKQAGLDYYNHNLDTAPDFYGQVISTRSYQDRLDTLQRVQEAGLNVCCGGII 212 L+ QA+ALK AGLDYYNHNLD+AP+FYG +ISTR+YQDRLDTL V++AG+NVCCGGI+ Sbjct: 154 LQAEQAQALKDAGLDYYNHNLDSAPEFYGDIISTRTYQDRLDTLGHVRQAGINVCCGGIV 213 Query: 213 GMGETRAQRAGLIAQLASLPVPPQSVPINHLVPIAGTPLQDVAPLDEFEFVRTVAVARIA 272 GMGE+R QRAGLIAQLA+L P+SVPIN+LVP+AGTPL + APLD FEFVRT+AVARI Sbjct: 214 GMGESRLQRAGLIAQLANLSPYPESVPINNLVPVAGTPLANTAPLDPFEFVRTIAVARIT 273 Query: 273 LPQAVIRLSAGRESMSEATQALCFAAGANSIFLGAKLLTTANAPVSADLDLLQRLGLQAA 332 +P ++RLSAGRE M EA QALCFAAGANSIF G KLLTT+N D L +RLGL+ Sbjct: 274 MPLTMVRLSAGREQMDEALQALCFAAGANSIFYGDKLLTTSNPQADRDRQLFERLGLKTQ 333 Query: 333 AA 334 A Sbjct: 334 GA 335 >ref|YP_001792663.1| biotin synthase [Leptothrix cholodnii SP-6] sp|B1Y502|BIOB_LEPCP RecName: Full=Biotin synthase gb|ACB35898.1| biotin synthase [Leptothrix cholodnii SP-6] Length = 345 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 217/300 (72%), Positives = 251/300 (83%), Gaps = 1/300 (0%) Query: 31 EQLFELPFLDLLYRAQTVHRQHHRANEVQLSSLLSIKTGGCAEDCGYCSQSAHHQDAGVP 90 E L+ LPF+DLL++AQ VHR H ANEVQLS+LLSIKTGGCAEDCGYC QSAH D V Sbjct: 34 EALYALPFMDLLFQAQQVHRAHFDANEVQLSTLLSIKTGGCAEDCGYCPQSAHF-DTAVE 92 Query: 91 ASKLMAVDDVVQAAQAARAQGATRFCMGAAWRNPKQRDMAALTEMVSQVRALGLETCMTL 150 ASKLM +D+V+ AA AA+AQGATRFCMGAAWR+PK+RDM +TEMV +VRALGLETCMTL Sbjct: 93 ASKLMPIDEVLDAANAAKAQGATRFCMGAAWRSPKERDMERVTEMVREVRALGLETCMTL 152 Query: 151 GMLEQAQAEALKQAGLDYYNHNLDTAPDFYGQVISTRSYQDRLDTLQRVQEAGLNVCCGG 210 GML+ QA LK AGLDYYNHNLD+APDFYGQVISTR+YQDRLDTL V++AG+NVCCGG Sbjct: 153 GMLDGEQARELKDAGLDYYNHNLDSAPDFYGQVISTRTYQDRLDTLGNVRDAGINVCCGG 212 Query: 211 IIGMGETRAQRAGLIAQLASLPVPPQSVPINHLVPIAGTPLQDVAPLDEFEFVRTVAVAR 270 I+GMGE+R QRAGLIAQLA+L P+SVPIN+LVP+ GTPL D P+D FEFVRT+AVAR Sbjct: 213 IVGMGESRTQRAGLIAQLANLSPYPESVPINNLVPVPGTPLADAEPIDPFEFVRTIAVAR 272 Query: 271 IALPQAVIRLSAGRESMSEATQALCFAAGANSIFLGAKLLTTANAPVSADLDLLQRLGLQ 330 I +P ++RLSAGRE M EA QALCFAAGANSIF G KLLTT+N + D L +RLGL+ Sbjct: 273 ITMPTTMVRLSAGREQMDEALQALCFAAGANSIFYGDKLLTTSNPQAARDRALFERLGLR 332 >ref|ZP_03584027.1| biotin synthase [Burkholderia multivorans CGD1] gb|EEE00877.1| biotin synthase [Burkholderia multivorans CGD1] Length = 324 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 215/304 (70%), Positives = 252/304 (82%), Gaps = 1/304 (0%) Query: 33 LFELPFLDLLYRAQTVHRQHHRANEVQLSSLLSIKTGGCAEDCGYCSQSAHHQDAGVPAS 92 LFELPF DL++RAQ VHR+H AN VQLS+LLSIKTGGC EDCGYCSQSAHH D G+ A Sbjct: 17 LFELPFNDLIFRAQQVHREHFDANAVQLSTLLSIKTGGCEEDCGYCSQSAHH-DTGLKAE 75 Query: 93 KLMAVDDVVQAAQAARAQGATRFCMGAAWRNPKQRDMAALTEMVSQVRALGLETCMTLGM 152 KLM VD V+ AA+AA+A GA+RFCMGAAWRNPK+R M ALTEMV V+ALGLETCMTLGM Sbjct: 76 KLMDVDAVLDAARAAKANGASRFCMGAAWRNPKERHMPALTEMVRGVKALGLETCMTLGM 135 Query: 153 LEQAQAEALKQAGLDYYNHNLDTAPDFYGQVISTRSYQDRLDTLQRVQEAGLNVCCGGII 212 LE QA+ L AGLDYYNHNLDT+P+FYGQVISTR+YQDRLDTL RV++AG+NVCCGGII Sbjct: 136 LEDEQAKQLADAGLDYYNHNLDTSPEFYGQVISTRTYQDRLDTLDRVRDAGINVCCGGII 195 Query: 213 GMGETRAQRAGLIAQLASLPVPPQSVPINHLVPIAGTPLQDVAPLDEFEFVRTVAVARIA 272 GMGE+R +RAGLI+QLA+L P+SVPIN+LV I GTPL APLD FEFVRT+AVARI Sbjct: 196 GMGESRRERAGLISQLANLNPYPESVPINNLVAIEGTPLAGTAPLDPFEFVRTIAVARIT 255 Query: 273 LPQAVIRLSAGRESMSEATQALCFAAGANSIFLGAKLLTTANAPVSADLDLLQRLGLQAA 332 +P+AV+RLSAGRE + + QALCF AGANS+F G +LLTT+N D L +RLG++A+ Sbjct: 256 MPKAVVRLSAGREQLDDGLQALCFLAGANSMFYGDQLLTTSNPQTQKDRALFERLGIRAS 315 Query: 333 AAAA 336 A A Sbjct: 316 EADA 319