BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3138.p (246 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775858.1| dethiobiotin synthetase [Herbaspirillum sero... 281 6e-74 ref|YP_546268.1| dethiobiotin synthase [Methylobacillus flagella... 221 7e-56 ref|YP_004754897.1| dethiobiotin synthetase [Collimonas fungivor... 208 6e-52 ref|YP_002944698.1| dethiobiotin synthase [Variovorax paradoxus ... 202 4e-50 ref|ZP_08275318.1| Dethiobiotin synthetase [Oxalobacteraceae bac... 190 1e-46 >ref|YP_003775858.1| dethiobiotin synthetase [Herbaspirillum seropedicae SmR1] gb|ADJ63950.1| dethiobiotin synthetase protein [Herbaspirillum seropedicae SmR1] Length = 243 Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats. Identities = 154/212 (72%), Positives = 168/212 (79%) Query: 24 RSYFVTGTDTGVGKTLVASALIHLHAARGLRAGGMKPVASGAFLQDGVWCNEDVQALQAA 83 + FVTGTDTGVGKTLVASAL+HLHAA GLR GMKPVASGAF WCNEDV ALQA Sbjct: 17 KGIFVTGTDTGVGKTLVASALVHLHAAHGLRCVGMKPVASGAFHDGQRWCNEDVLALQAQ 76 Query: 84 ANVDLPLHLVNPYLLRQATAPHIAAAEEGVQIALDHLALCHAQLQSACDVLIVEGAGGFM 143 ANV +P H VNPYLLR+ATAPHIAAAEEGV I L+HLA CH L +A D +IVEGAGG M Sbjct: 77 ANVQVPPHWVNPYLLRRATAPHIAAAEEGVTIELEHLAACHGHLAAASDCVIVEGAGGLM 136 Query: 144 VPLDERYNSDDLVARLDLPVVLVVGIRLGCINHALLTQQAIRWRGLRLAGWVANHVDARE 203 VPLD R+N+DDLVARL LPVVLVVG+RLGCINHALLTQQAI RGL L GWVAN +D E Sbjct: 137 VPLDARHNTDDLVARLGLPVVLVVGMRLGCINHALLTQQAIAARGLPLLGWVANEIDPAE 196 Query: 204 TQAGAMVNTLVQRLQAPLLGRLPWSPEMTAAQ 235 AMV +L RL APLLGRLPW P M+A + Sbjct: 197 ACMDAMVESLQARLHAPLLGRLPWQPGMSAQE 228 >ref|YP_546268.1| dethiobiotin synthase [Methylobacillus flagellatus KT] gb|ABE50427.1| dethiobiotin synthase [Methylobacillus flagellatus KT] Length = 228 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 119/212 (56%), Positives = 153/212 (72%) Query: 24 RSYFVTGTDTGVGKTLVASALIHLHAARGLRAGGMKPVASGAFLQDGVWCNEDVQALQAA 83 +++FVTGTDTGVGKT+V+S L+ +ARGLR+ GMKPVASG +DG +EDV L AA Sbjct: 7 QAWFVTGTDTGVGKTMVSSMLVRQFSARGLRSVGMKPVASGCERRDGRLISEDVTQLLAA 66 Query: 84 ANVDLPLHLVNPYLLRQATAPHIAAAEEGVQIALDHLALCHAQLQSACDVLIVEGAGGFM 143 +NVDLPL +NPY A APHIAA + GV+I L+ +A +LQ+ +V+IVEGAGGF Sbjct: 67 SNVDLPLSDINPYAFEPAIAPHIAAKQAGVRIDLEPIAAAFRRLQAQANVVIVEGAGGFY 126 Query: 144 VPLDERYNSDDLVARLDLPVVLVVGIRLGCINHALLTQQAIRWRGLRLAGWVANHVDARE 203 VPLDE+++ DL A+L LPV+LVVG+RLGCINHALLT +AIR RGL LAGWVAN VD Sbjct: 127 VPLDEQHDMADLAAKLGLPVILVVGMRLGCINHALLTAEAIRQRGLTLAGWVANQVDPGM 186 Query: 204 TQAGAMVNTLVQRLQAPLLGRLPWSPEMTAAQ 235 + TL QR+ + LG +PW + + A+ Sbjct: 187 AMLEDNLQTLKQRMPSIYLGFIPWQDQASTAE 218 >ref|YP_004754897.1| dethiobiotin synthetase [Collimonas fungivorans Ter331] gb|AEK64074.1| Dethiobiotin synthetase [Collimonas fungivorans Ter331] Length = 248 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 116/232 (50%), Positives = 153/232 (65%), Gaps = 10/232 (4%) Query: 25 SYFVTGTDTGVGKTLVASALIHLHAARGLRAGGMKPVASGAFLQDGVWCNEDVQALQAAA 84 ++F+ GTDT +GKTL+A AL+H G+R+ GMKPVA+GA L++G W N+D L A A Sbjct: 12 AWFIAGTDTEIGKTLIAGALLHGLTKTGVRSAGMKPVAAGAELRNGAWHNDDADVLAAEA 71 Query: 85 NVDLPLHLVNPYLLRQATAPHIAAAEEGVQIALDHLALCHAQLQSACDVLIVEGAGGFMV 144 +V LP + P+LLRQATAPHIAA +E I L H+ C+ Q+ + D ++VEG GGF V Sbjct: 72 SVTLPQEMTTPFLLRQATAPHIAAEQEQRSIELAHILSCYQQIAALADAVVVEGVGGFRV 131 Query: 145 PLDERYNSDDLVARLDLPVVLVVGIRLGCINHALLTQQAIRWRGLRLAGWVANHVDARET 204 PL++ +++ DL +L LPVVLVVG+RLGCI+HALLT +AI RGLRLAGWVAN VDA Sbjct: 132 PLNDTHDTADLAQQLGLPVVLVVGLRLGCISHALLTAEAIAARGLRLAGWVANTVDAAML 191 Query: 205 QAGAMVNTLVQRLQAPLLGRLPWSPEMTAAQV----------AGLLTWPDPS 246 A A + L R+ AP LG +P E+ A + + L WP PS Sbjct: 192 NADANIAALKSRIDAPFLGHVPRMDELPARALVEAAASHLDFSRLPDWPKPS 243 >ref|YP_002944698.1| dethiobiotin synthase [Variovorax paradoxus S110] gb|ACS19432.1| dethiobiotin synthase [Variovorax paradoxus S110] Length = 266 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 122/223 (54%), Positives = 151/223 (67%) Query: 15 ARGGSPMSGRSYFVTGTDTGVGKTLVASALIHLHAARGLRAGGMKPVASGAFLQDGVWCN 74 A G+PM+ R +FVTGTDTGVGKTL +SA++ L AA GLRA GMKPVA+G DG W N Sbjct: 3 AAPGAPMTRRRWFVTGTDTGVGKTLASSAMLGLLAASGLRAVGMKPVAAGLERIDGAWRN 62 Query: 75 EDVQALQAAANVDLPLHLVNPYLLRQATAPHIAAAEEGVQIALDHLALCHAQLQSACDVL 134 +DV+ L+AA NVD PL L PYLLR +PH+AA EEGV+I L L A L D + Sbjct: 63 DDVEQLRAAGNVDAPLALRCPYLLRAPMSPHLAAREEGVRIELPPLLSAFAALSQQADAV 122 Query: 135 IVEGAGGFMVPLDERYNSDDLVARLDLPVVLVVGIRLGCINHALLTQQAIRWRGLRLAGW 194 +VEG GGF VP + +S +L L LPV+LVVG+RLGC+NHALLT +AIR RGL LAGW Sbjct: 123 VVEGVGGFCVPFGDDLDSAELAVALGLPVILVVGLRLGCLNHALLTAEAIRARGLMLAGW 182 Query: 195 VANHVDARETQAGAMVNTLVQRLQAPLLGRLPWSPEMTAAQVA 237 +A+ ++ A + TL RL APLLG +P E +AA A Sbjct: 183 IASTIEPEMLAPEANLQTLRGRLGAPLLGVVPHLAEPSAASAA 225 >ref|ZP_08275318.1| Dethiobiotin synthetase [Oxalobacteraceae bacterium IMCC9480] gb|EGF31210.1| Dethiobiotin synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 239 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 121/207 (58%), Positives = 145/207 (70%), Gaps = 1/207 (0%) Query: 21 MSGR-SYFVTGTDTGVGKTLVASALIHLHAARGLRAGGMKPVASGAFLQDGVWCNEDVQA 79 MS R + FVTGTDTGVGKTLV++AL+HL GL GMKPVA+GA + DG NEDV Sbjct: 1 MSARFACFVTGTDTGVGKTLVSAALVHLLVEAGLGTVGMKPVAAGATMIDGRLANEDVDQ 60 Query: 80 LQAAANVDLPLHLVNPYLLRQATAPHIAAAEEGVQIALDHLALCHAQLQSACDVLIVEGA 139 L AA N+ LP PY+L A APHIAAA EGV I+LDHL C+ QL++ D ++VEG Sbjct: 61 LAAAGNLALPSAWCAPYILHAAAAPHIAAAREGVSISLDHLLDCYRQLEAGADAVVVEGV 120 Query: 140 GGFMVPLDERYNSDDLVARLDLPVVLVVGIRLGCINHALLTQQAIRWRGLRLAGWVANHV 199 GGF VPL + ++ DL +L LPVVLVVG+RLGCI+HALLT +AIR RGLRLAGWVAN + Sbjct: 121 GGFSVPLSDDADTADLAQQLGLPVVLVVGMRLGCISHALLTAEAIRARGLRLAGWVANLI 180 Query: 200 DARETQAGAMVNTLVQRLQAPLLGRLP 226 D + LV RL APLLG +P Sbjct: 181 DPEMGYLPDNIAALVARLDAPLLGVIP 207